RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 SLC10A3P09131 477 aa12.02□□□□□ -0.49
HMHB1-201ENST00000289448 GYG1P46976 350 aa12.02□□□□□ -0.49
HMHB1-201ENST00000289448 KIF23Q02241 960 aaPredicted RBP12.02□□□□□ -0.49
HMHB1-201ENST00000289448 KLHDC4Q8TBB5 520 aa12.02□□□□□ -0.49
HMHB1-201ENST00000289448 FAM84BQ96KN1 310 aaPredicted RBP12.02□□□□□ -0.49
HMHB1-201ENST00000289448 AOX1Q06278 1338 aa12.02□□□□□ -0.49
HMHB1-201ENST00000289448 F8W031 263 aaPredicted RBP12.01□□□□□ -0.49
HMHB1-201ENST00000289448 UBE2Q2LH0YL09 131 aa12.01□□□□□ -0.49
HMHB1-201ENST00000289448 MMP14P50281 582 aa12.01□□□□□ -0.49
HMHB1-201ENST00000289448 UBE4AQ14139 1066 aa12.01□□□□□ -0.49
HMHB1-201ENST00000289448 VGLL2Q8N8G2 317 aa12.01□□□□□ -0.49
HMHB1-201ENST00000289448 TDRD7Q8NHU6 1098 aaKnown RBP12.01□□□□□ -0.49
HMHB1-201ENST00000289448 CCDC102AQ96A19 550 aa12.01□□□□□ -0.49
HMHB1-201ENST00000289448 NOB1Q9ULX3 412 aaKnown RBP12.01□□□□□ -0.49
HMHB1-201ENST00000289448 RFX5P48382 616 aaPredicted RBP12□□□□□ -0.49
HMHB1-201ENST00000289448 FKBP1AP62942 108 aaKnown RBP12□□□□□ -0.49
HMHB1-201ENST00000289448 FKBP1BP68106 108 aa12□□□□□ -0.49
HMHB1-201ENST00000289448 DLGAP5Q15398 846 aa12□□□□□ -0.49
HMHB1-201ENST00000289448 RASAL3Q86YV0 1011 aa12□□□□□ -0.49
HMHB1-201ENST00000289448 MTMR14Q8NCE2 650 aa12□□□□□ -0.49
HMHB1-201ENST00000289448 HDAC9Q9UKV0 1011 aa12□□□□□ -0.49
HMHB1-201ENST00000289448 FAM205AQ6ZU69 1335 aa12□□□□□ -0.49
HMHB1-201ENST00000289448 MROH5Q6ZUA9 1318 aa12□□□□□ -0.49
HMHB1-201ENST00000289448 CA12O43570 354 aa11.99□□□□□ -0.49
HMHB1-201ENST00000289448 HIBADHP31937 336 aaKnown RBP11.99□□□□□ -0.49
HMHB1-201ENST00000289448 RARSP54136 660 aaKnown RBP11.99□□□□□ -0.49
HMHB1-201ENST00000289448 CFAP100Q494V2 611 aa11.99□□□□□ -0.49
HMHB1-201ENST00000289448 FBXO33Q7Z6M2 555 aa11.99□□□□□ -0.49
HMHB1-201ENST00000289448 PRMT6Q96LA8 375 aaPredicted RBP11.99□□□□□ -0.49
HMHB1-201ENST00000289448 CSRNP1Q96S65 589 aa11.99□□□□□ -0.49
HMHB1-201ENST00000289448 PAPPA2Q9BXP8 1791 aa11.98□□□□□ -0.49
HMHB1-201ENST00000289448 SPDYE2BA6NHP3 402 aa11.98□□□□□ -0.49
HMHB1-201ENST00000289448 CT47B1P0C2W7 299 aaPredicted RBP11.98□□□□□ -0.49
HMHB1-201ENST00000289448 SPDYE6P0CI01 402 aa11.98□□□□□ -0.49
HMHB1-201ENST00000289448 PRKG1Q13976 671 aa11.98□□□□□ -0.49
HMHB1-201ENST00000289448 GRIK5Q16478 980 aa11.98□□□□□ -0.49
HMHB1-201ENST00000289448 METTL24Q5JXM2 366 aa11.98□□□□□ -0.49
HMHB1-201ENST00000289448 APOBEC3FQ8IUX4 373 aaKnown RBP11.98□□□□□ -0.49
HMHB1-201ENST00000289448 DEFB129Q9H1M3 183 aa11.98□□□□□ -0.49
HMHB1-201ENST00000289448 RNF186Q9NXI6 227 aa11.98□□□□□ -0.49
HMHB1-201ENST00000289448 FZD1Q9UP38 647 aa11.98□□□□□ -0.49
HMHB1-201ENST00000289448 IQSEC3Q9UPP2 1182 aaPredicted RBP11.98□□□□□ -0.49
HMHB1-201ENST00000289448 CLRN2A0PK11 232 aa11.97□□□□□ -0.49
HMHB1-201ENST00000289448 TRPA1O75762 1119 aa11.97□□□□□ -0.49
HMHB1-201ENST00000289448 PDE8BO95263 885 aa11.97□□□□□ -0.49
HMHB1-201ENST00000289448 FGFR2P21802 821 aa11.97□□□□□ -0.49
HMHB1-201ENST00000289448 PTPN12Q05209 780 aaKnown RBP11.97□□□□□ -0.49
HMHB1-201ENST00000289448 TTLL12Q14166 644 aaPredicted RBP11.97□□□□□ -0.49
HMHB1-201ENST00000289448 MFSD14BQ5SR56 506 aa11.97□□□□□ -0.49
HMHB1-201ENST00000289448 ABHD8Q96I13 439 aa11.97□□□□□ -0.49
HMHB1-201ENST00000289448 CASP8AP2Q9UKL3 1982 aa11.97□□□□□ -0.49
HMHB1-201ENST00000289448 EYA2O00167 538 aa11.96□□□□□ -0.49
HMHB1-201ENST00000289448 BCAMP50895 628 aa11.96□□□□□ -0.49
HMHB1-201ENST00000289448 ATG9AQ7Z3C6 839 aa11.96□□□□□ -0.49
HMHB1-201ENST00000289448 TTF2Q9UNY4 1162 aaKnown RBP11.96□□□□□ -0.49
HMHB1-201ENST00000289448 SSC5DA1L4H1 1573 aa11.96□□□□□ -0.5
HMHB1-201ENST00000289448 UBTFL1P0CB47 393 aaPredicted RBP11.95□□□□□ -0.5
HMHB1-201ENST00000289448 NF2P35240 595 aa11.95□□□□□ -0.5
HMHB1-201ENST00000289448 RBM5P52756 815 aaKnown RBP eCLIP11.95□□□□□ -0.5
HMHB1-201ENST00000289448 CHAF1AQ13111 956 aaPredicted RBP11.95□□□□□ -0.5
HMHB1-201ENST00000289448 LDLRAD1Q5T700 205 aa11.95□□□□□ -0.5
HMHB1-201ENST00000289448 MIER1Q8N108 512 aa11.95□□□□□ -0.5
HMHB1-201ENST00000289448 MEIS3Q99687 375 aa11.95□□□□□ -0.5
HMHB1-201ENST00000289448 API5Q9BZZ5 524 aaKnown RBP11.95□□□□□ -0.5
HMHB1-201ENST00000289448 SAGE1Q9NXZ1 904 aa11.95□□□□□ -0.5
HMHB1-201ENST00000289448 TNNQ9UQP3 1299 aa11.95□□□□□ -0.5
HMHB1-201ENST00000289448 MKRN3Q13064 507 aaKnown RBP11.94□□□□□ -0.5
HMHB1-201ENST00000289448 PUM3Q15397 648 aaKnown RBP11.94□□□□□ -0.5
HMHB1-201ENST00000289448 CAVIN4Q5BKX8 364 aa11.94□□□□□ -0.5
HMHB1-201ENST00000289448 NBPF12Q5TAG4 269 aaPredicted RBP11.94□□□□□ -0.5
HMHB1-201ENST00000289448 ARMC9Q7Z3E5 817 aa11.94□□□□□ -0.5
HMHB1-201ENST00000289448 VPS37DQ86XT2 251 aa11.94□□□□□ -0.5
HMHB1-201ENST00000289448 SIL1Q9H173 461 aa11.94□□□□□ -0.5
HMHB1-201ENST00000289448 TDRD3Q9H7E2 651 aaKnown RBP11.94□□□□□ -0.5
HMHB1-201ENST00000289448 VEZTQ9HBM0 779 aa11.94□□□□□ -0.5
HMHB1-201ENST00000289448 ZNF70Q9UC06 446 aaPredicted RBP11.94□□□□□ -0.5
HMHB1-201ENST00000289448 SERPINA10Q9UK55 444 aa11.94□□□□□ -0.5
HMHB1-201ENST00000289448 ANGEL1Q9UNK9 670 aaKnown RBP11.94□□□□□ -0.5
HMHB1-201ENST00000289448 LRRFIP2Q9Y608 721 aaKnown RBP11.94□□□□□ -0.5
HMHB1-201ENST00000289448 MYO1BO43795 1136 aa11.93□□□□□ -0.5
HMHB1-201ENST00000289448 BCAR3O75815 825 aa11.93□□□□□ -0.5
HMHB1-201ENST00000289448 CRKP46108 304 aa11.93□□□□□ -0.5
HMHB1-201ENST00000289448 RASA3Q14644 834 aa11.93□□□□□ -0.5
HMHB1-201ENST00000289448 MAP3K11Q16584 847 aa11.93□□□□□ -0.5
HMHB1-201ENST00000289448 SPDYE2Q495Y8 402 aa11.93□□□□□ -0.5
HMHB1-201ENST00000289448 INTS3Q68E01 1043 aaKnown RBP11.93□□□□□ -0.5
HMHB1-201ENST00000289448 CDAN1Q8IWY9 1227 aa11.93□□□□□ -0.5
HMHB1-201ENST00000289448 DZIP1LQ8IYY4 767 aaKnown RBP11.93□□□□□ -0.5
HMHB1-201ENST00000289448 ARHGAP45Q92619 1136 aa11.93□□□□□ -0.5
HMHB1-201ENST00000289448 CLMNQ96JQ2 1002 aa11.93□□□□□ -0.5
HMHB1-201ENST00000289448 MCOLN1Q9GZU1 580 aa11.93□□□□□ -0.5
HMHB1-201ENST00000289448 PA2G4Q9UQ80 394 aaKnown RBP11.93□□□□□ -0.5
HMHB1-201ENST00000289448 PPP2R3BQ9Y5P8 575 aa11.93□□□□□ -0.5
HMHB1-201ENST00000289448 COL1A1P02452 1464 aaPredicted RBP11.93□□□□□ -0.5
HMHB1-201ENST00000289448 KIF16BQ96L93 1317 aa11.92□□□□□ -0.5
HMHB1-201ENST00000289448 FRAT2O75474 233 aaPredicted RBP11.92□□□□□ -0.5
HMHB1-201ENST00000289448 IFIT1P09914 478 aaKnown RBP11.92□□□□□ -0.5
HMHB1-201ENST00000289448 TM4SF4P48230 202 aa11.92□□□□□ -0.5
HMHB1-201ENST00000289448 REM2Q8IYK8 340 aaPredicted RBP11.92□□□□□ -0.5
HMHB1-201ENST00000289448 LPIN2Q92539 896 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms