RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 MINPP1Q9UNW1 487 aa12.11□□□□□ -0.47
C9orf43-201ENST00000288462 SMC3Q9UQE7 1217 aa12.11□□□□□ -0.47
C9orf43-201ENST00000288462 WDR33Q9C0J8 1336 aaKnown RBP12.11□□□□□ -0.47
C9orf43-201ENST00000288462 RGPD3A6NKT7 1758 aaPredicted RBP12.1□□□□□ -0.47
C9orf43-201ENST00000288462 RGPD4Q7Z3J3 1758 aa12.1□□□□□ -0.47
C9orf43-201ENST00000288462 A0A0G2JLW4 131 aa12.1□□□□□ -0.47
C9orf43-201ENST00000288462 E7EWF7 191 aa12.1□□□□□ -0.47
C9orf43-201ENST00000288462 IDH1O75874 414 aaKnown RBP12.1□□□□□ -0.47
C9orf43-201ENST00000288462 NFIXQ14938 502 aa12.1□□□□□ -0.47
C9orf43-201ENST00000288462 ZNF532Q9HCE3 1301 aa12.1□□□□□ -0.47
C9orf43-201ENST00000288462 CACNA1SQ13698 1873 aa12.1□□□□□ -0.47
C9orf43-201ENST00000288462 EP400Q96L91 3159 aa12.1□□□□□ -0.47
C9orf43-201ENST00000288462 TNS1Q9HBL0 1735 aaKnown RBP12.1□□□□□ -0.47
C9orf43-201ENST00000288462 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.1□□□□□ -0.47
C9orf43-201ENST00000288462 BCAMP50895 628 aa12.1□□□□□ -0.47
C9orf43-201ENST00000288462 DHX32Q7L7V1 743 aaKnown RBP12.1□□□□□ -0.47
C9orf43-201ENST00000288462 AGXT2Q9BYV1 514 aa12.1□□□□□ -0.47
C9orf43-201ENST00000288462 KIAA1551Q9HCM1 1747 aa12.09□□□□□ -0.47
C9orf43-201ENST00000288462 TRIM37O94972 964 aa12.09□□□□□ -0.47
C9orf43-201ENST00000288462 TM4SF1P30408 202 aa12.09□□□□□ -0.47
C9orf43-201ENST00000288462 RPS8P62241 208 aaKnown RBP12.09□□□□□ -0.47
C9orf43-201ENST00000288462 EXOSC10Q01780 885 aaKnown RBP12.09□□□□□ -0.47
C9orf43-201ENST00000288462 MAP3K12Q12852 859 aa12.09□□□□□ -0.47
C9orf43-201ENST00000288462 MCTP1Q6DN14 999 aa12.09□□□□□ -0.47
C9orf43-201ENST00000288462 TTLL5Q6EMB2 1281 aa12.09□□□□□ -0.47
C9orf43-201ENST00000288462 NECAB1Q8N987 351 aa12.09□□□□□ -0.47
C9orf43-201ENST00000288462 ZMYM6O95789 1325 aa12.09□□□□□ -0.47
C9orf43-201ENST00000288462 FGAP02671 866 aa12.08□□□□□ -0.47
C9orf43-201ENST00000288462 GJB2P29033 226 aa12.08□□□□□ -0.47
C9orf43-201ENST00000288462 RBM6P78332 1123 aaKnown RBP12.08□□□□□ -0.47
C9orf43-201ENST00000288462 IMMTQ16891 758 aaKnown RBP12.08□□□□□ -0.47
C9orf43-201ENST00000288462 Q6ZUG5 572 aa12.08□□□□□ -0.47
C9orf43-201ENST00000288462 LRRC37AA6NMS7 1700 aa12.08□□□□□ -0.48
C9orf43-201ENST00000288462 ZBTB22O15209 634 aa12.08□□□□□ -0.48
C9orf43-201ENST00000288462 GYS1P13807 737 aa12.08□□□□□ -0.48
C9orf43-201ENST00000288462 SYT1P21579 422 aa12.08□□□□□ -0.48
C9orf43-201ENST00000288462 ZNF772Q68DY9 489 aaPredicted RBP12.08□□□□□ -0.48
C9orf43-201ENST00000288462 FBXL16Q8N461 479 aa12.08□□□□□ -0.48
C9orf43-201ENST00000288462 CNBD1Q8NA66 436 aa12.08□□□□□ -0.48
C9orf43-201ENST00000288462 GTF3C6Q969F1 213 aa12.08□□□□□ -0.48
C9orf43-201ENST00000288462 LMBRD1Q9NUN5 540 aa12.08□□□□□ -0.48
C9orf43-201ENST00000288462 NRXN2Q9P2S2 1712 aa12.08□□□□□ -0.48
C9orf43-201ENST00000288462 PDS5AQ29RF7 1337 aaKnown RBP12.07□□□□□ -0.48
C9orf43-201ENST00000288462 STX6O43752 255 aa12.07□□□□□ -0.48
C9orf43-201ENST00000288462 ZSCAN22P10073 491 aaPredicted RBP12.07□□□□□ -0.48
C9orf43-201ENST00000288462 KLHL40Q2TBA0 621 aa12.07□□□□□ -0.48
C9orf43-201ENST00000288462 ANKRD2Q9GZV1 360 aa12.07□□□□□ -0.48
C9orf43-201ENST00000288462 GNL3LQ9NVN8 582 aaKnown RBP12.07□□□□□ -0.48
C9orf43-201ENST00000288462 HMGB2P26583 209 aaKnown RBP12.07□□□□□ -0.48
C9orf43-201ENST00000288462 GYG1P46976 350 aa12.07□□□□□ -0.48
C9orf43-201ENST00000288462 ALX1Q15699 326 aa12.07□□□□□ -0.48
C9orf43-201ENST00000288462 FOXD4L5Q5VV16 416 aaPredicted RBP12.07□□□□□ -0.48
C9orf43-201ENST00000288462 PRR5LQ6MZQ0 368 aa12.07□□□□□ -0.48
C9orf43-201ENST00000288462 CCDC24Q8N4L8 307 aa12.07□□□□□ -0.48
C9orf43-201ENST00000288462 MAGEB6Q8N7X4 407 aa12.07□□□□□ -0.48
C9orf43-201ENST00000288462 FOXD4L4Q8WXT5 416 aaPredicted RBP12.07□□□□□ -0.48
C9orf43-201ENST00000288462 STRBPQ96SI9 672 aaKnown RBP12.07□□□□□ -0.48
C9orf43-201ENST00000288462 TCHHQ07283 1943 aa12.06□□□□□ -0.48
C9orf43-201ENST00000288462 PNPLA7Q6ZV29 1317 aa12.06□□□□□ -0.48
C9orf43-201ENST00000288462 WDR19Q8NEZ3 1342 aa12.06□□□□□ -0.48
C9orf43-201ENST00000288462 IRS2Q9Y4H2 1338 aa12.06□□□□□ -0.48
C9orf43-201ENST00000288462 ANKRD31Q8N7Z5 1873 aa12.06□□□□□ -0.48
C9orf43-201ENST00000288462 WTIPA6NIX2 430 aaPredicted RBP12.06□□□□□ -0.48
C9orf43-201ENST00000288462 SEMA3EO15041 775 aa12.06□□□□□ -0.48
C9orf43-201ENST00000288462 TXNRD1Q16881 649 aa12.06□□□□□ -0.48
C9orf43-201ENST00000288462 MB21D2Q8IYB1 491 aaPredicted RBP12.06□□□□□ -0.48
C9orf43-201ENST00000288462 BRF1Q92994 677 aa12.06□□□□□ -0.48
C9orf43-201ENST00000288462 FAM84BQ96KN1 310 aaPredicted RBP12.06□□□□□ -0.48
C9orf43-201ENST00000288462 NBPF3Q9H094 633 aa12.06□□□□□ -0.48
C9orf43-201ENST00000288462 PFKFB2O60825 505 aa12.05□□□□□ -0.48
C9orf43-201ENST00000288462 PDIA4P13667 645 aaKnown RBP12.05□□□□□ -0.48
C9orf43-201ENST00000288462 CAVIN4Q5BKX8 364 aa12.05□□□□□ -0.48
C9orf43-201ENST00000288462 FBXO33Q7Z6M2 555 aa12.05□□□□□ -0.48
C9orf43-201ENST00000288462 PROM2Q8N271 834 aa12.05□□□□□ -0.48
C9orf43-201ENST00000288462 AIDAQ96BJ3 306 aa12.05□□□□□ -0.48
C9orf43-201ENST00000288462 CHAMP1Q96JM3 812 aa12.05□□□□□ -0.48
C9orf43-201ENST00000288462 MTMR6Q9Y217 621 aa12.05□□□□□ -0.48
C9orf43-201ENST00000288462 CCDC88AQ3V6T2 1871 aa12.05□□□□□ -0.48
C9orf43-201ENST00000288462 LTBP1Q14766 1721 aa12.05□□□□□ -0.48
C9orf43-201ENST00000288462 MBD4O95243 580 aa12.05□□□□□ -0.48
C9orf43-201ENST00000288462 F13A1P00488 732 aa12.05□□□□□ -0.48
C9orf43-201ENST00000288462 EVCP57679 992 aa12.05□□□□□ -0.48
C9orf43-201ENST00000288462 HAND2P61296 217 aa12.05□□□□□ -0.48
C9orf43-201ENST00000288462 GRAPQ13588 217 aa12.05□□□□□ -0.48
C9orf43-201ENST00000288462 CRY2Q49AN0 593 aa12.05□□□□□ -0.48
C9orf43-201ENST00000288462 GRAPLQ8TC17 118 aaPredicted RBP12.05□□□□□ -0.48
C9orf43-201ENST00000288462 LRRC2Q9BYS8 371 aa12.05□□□□□ -0.48
C9orf43-201ENST00000288462 EPB41L4AQ9HCS5 686 aaPredicted RBP12.05□□□□□ -0.48
C9orf43-201ENST00000288462 DENND2AQ9ULE3 1009 aa12.05□□□□□ -0.48
C9orf43-201ENST00000288462 ZNF213O14771 459 aa12.04□□□□□ -0.48
C9orf43-201ENST00000288462 KLRK1P26718 216 aa12.04□□□□□ -0.48
C9orf43-201ENST00000288462 GZF1Q9H116 711 aaPredicted RBP12.04□□□□□ -0.48
C9orf43-201ENST00000288462 DUOX1Q9NRD9 1551 aa12.04□□□□□ -0.48
C9orf43-201ENST00000288462 MYH15Q9Y2K3 1946 aa12.04□□□□□ -0.48
C9orf43-201ENST00000288462 FSD2A1L4K1 749 aa12.04□□□□□ -0.48
C9orf43-201ENST00000288462 PLSCR1O15162 318 aa12.04□□□□□ -0.48
C9orf43-201ENST00000288462 NPHP1O15259 732 aa12.04□□□□□ -0.48
C9orf43-201ENST00000288462 PDCP20941 246 aa12.04□□□□□ -0.48
C9orf43-201ENST00000288462 STK3Q13188 491 aa12.04□□□□□ -0.48
C9orf43-201ENST00000288462 TBC1D10CQ8IV04 446 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms