RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 RTCBQ9Y3I0 505 aaKnown RBP12.3□□□□□ -0.44
ERCC3-201ENST00000285398 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.3□□□□□ -0.44
ERCC3-201ENST00000285398 VPS37CA5D8V6 355 aaPredicted RBP12.3□□□□□ -0.44
ERCC3-201ENST00000285398 ZNF165P49910 485 aa12.3□□□□□ -0.44
ERCC3-201ENST00000285398 EN1Q05925 392 aaPredicted RBP12.3□□□□□ -0.44
ERCC3-201ENST00000285398 ELF2Q15723 593 aa12.3□□□□□ -0.44
ERCC3-201ENST00000285398 CCDC191Q8NCU4 936 aa12.3□□□□□ -0.44
ERCC3-201ENST00000285398 PI4K2BQ8TCG2 481 aa12.3□□□□□ -0.44
ERCC3-201ENST00000285398 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.29□□□□□ -0.44
ERCC3-201ENST00000285398 SUSD4Q5VX71 490 aa12.29□□□□□ -0.44
ERCC3-201ENST00000285398 CKAP2LQ8IYA6 745 aa12.29□□□□□ -0.44
ERCC3-201ENST00000285398 H7C1W4 665 aa12.29□□□□□ -0.44
ERCC3-201ENST00000285398 CAPN2P17655 700 aa12.29□□□□□ -0.44
ERCC3-201ENST00000285398 LIG1P18858 919 aa12.29□□□□□ -0.44
ERCC3-201ENST00000285398 RBM43Q6ZSC3 357 aaKnown RBP12.29□□□□□ -0.44
ERCC3-201ENST00000285398 DEFB132Q7Z7B7 95 aa12.29□□□□□ -0.44
ERCC3-201ENST00000285398 TTC6Q86TZ1 520 aa12.29□□□□□ -0.44
ERCC3-201ENST00000285398 CCDC83Q8IWF9 413 aa12.29□□□□□ -0.44
ERCC3-201ENST00000285398 PLCD3Q8N3E9 789 aa12.29□□□□□ -0.44
ERCC3-201ENST00000285398 SSH3Q8TE77 659 aa12.29□□□□□ -0.44
ERCC3-201ENST00000285398 LARP6Q9BRS8 491 aaKnown RBP12.29□□□□□ -0.44
ERCC3-201ENST00000285398 SCAND2PQ9GZW5 306 aaPredicted RBP12.29□□□□□ -0.44
ERCC3-201ENST00000285398 DACT1Q9NYF0 836 aa12.29□□□□□ -0.44
ERCC3-201ENST00000285398 UTYO14607 1347 aa12.28□□□□□ -0.44
ERCC3-201ENST00000285398 CNTNAP4Q9C0A0 1308 aa12.28□□□□□ -0.44
ERCC3-201ENST00000285398 RPS6KA4O75676 772 aa12.28□□□□□ -0.44
ERCC3-201ENST00000285398 ZNF594Q96JF6 807 aaPredicted RBP12.28□□□□□ -0.44
ERCC3-201ENST00000285398 ZFP91Q96JP5 570 aaPredicted RBP12.28□□□□□ -0.44
ERCC3-201ENST00000285398 RAB11FIP3O75154 756 aa12.28□□□□□ -0.44
ERCC3-201ENST00000285398 CASTP20810 708 aaKnown RBP12.28□□□□□ -0.44
ERCC3-201ENST00000285398 ZNF827Q17R98 1081 aa12.28□□□□□ -0.44
ERCC3-201ENST00000285398 VPS53Q5VIR6 699 aa12.28□□□□□ -0.44
ERCC3-201ENST00000285398 TBC1D9BQ66K14 1250 aa12.28□□□□□ -0.44
ERCC3-201ENST00000285398 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.28□□□□□ -0.44
ERCC3-201ENST00000285398 V9GYY5 206 aaPredicted RBP12.28□□□□□ -0.44
ERCC3-201ENST00000285398 GOLGA6L19H0YKK7 550 aa12.27□□□□□ -0.44
ERCC3-201ENST00000285398 SKILP12757 684 aa12.27□□□□□ -0.44
ERCC3-201ENST00000285398 PDCP20941 246 aa12.27□□□□□ -0.44
ERCC3-201ENST00000285398 FOXO4P98177 505 aa12.27□□□□□ -0.44
ERCC3-201ENST00000285398 OS9Q13438 667 aaPredicted RBP12.27□□□□□ -0.44
ERCC3-201ENST00000285398 CCDC144BQ3MJ40 725 aa12.27□□□□□ -0.44
ERCC3-201ENST00000285398 TEX35Q5T0J7 233 aa12.27□□□□□ -0.44
ERCC3-201ENST00000285398 SARM1Q6SZW1 724 aa12.27□□□□□ -0.44
ERCC3-201ENST00000285398 CCDC144CPQ8IYA2 1237 aa12.27□□□□□ -0.44
ERCC3-201ENST00000285398 MRFAP1L1Q96HT8 127 aa12.27□□□□□ -0.44
ERCC3-201ENST00000285398 COL5A3P25940 1745 aaPredicted RBP12.27□□□□□ -0.45
ERCC3-201ENST00000285398 NUP188Q5SRE5 1749 aa12.27□□□□□ -0.45
ERCC3-201ENST00000285398 AFDNP55196 1824 aaKnown RBP12.27□□□□□ -0.45
ERCC3-201ENST00000285398 ERVV-1B6SEH8 477 aa12.27□□□□□ -0.45
ERCC3-201ENST00000285398 RFC4P35249 363 aa12.27□□□□□ -0.45
ERCC3-201ENST00000285398 ST3GAL1Q11201 340 aa12.27□□□□□ -0.45
ERCC3-201ENST00000285398 POLA2Q14181 598 aa12.27□□□□□ -0.45
ERCC3-201ENST00000285398 EZH2Q15910 746 aaKnown RBP12.27□□□□□ -0.45
ERCC3-201ENST00000285398 LARP1BQ659C4 914 aaKnown RBP12.27□□□□□ -0.45
ERCC3-201ENST00000285398 ZNF34Q8IZ26 560 aa12.27□□□□□ -0.45
ERCC3-201ENST00000285398 CNTROBQ8N137 903 aa12.27□□□□□ -0.45
ERCC3-201ENST00000285398 CLSTN2Q9H4D0 955 aa12.27□□□□□ -0.45
ERCC3-201ENST00000285398 ZPR1O75312 459 aa12.26□□□□□ -0.45
ERCC3-201ENST00000285398 HNRNPH2P55795 449 aaKnown RBP12.26□□□□□ -0.45
ERCC3-201ENST00000285398 TRAPPC3LQ5T215 181 aa12.26□□□□□ -0.45
ERCC3-201ENST00000285398 KCND1Q9NSA2 647 aa12.26□□□□□ -0.45
ERCC3-201ENST00000285398 PDRG1Q9NUG6 133 aa12.26□□□□□ -0.45
ERCC3-201ENST00000285398 LY75O60449 1722 aa12.26□□□□□ -0.45
ERCC3-201ENST00000285398 MAP4K4O95819 1239 aaPredicted RBP12.26□□□□□ -0.45
ERCC3-201ENST00000285398 CPA1P15085 419 aa12.26□□□□□ -0.45
ERCC3-201ENST00000285398 ZBTB38Q8NAP3 1195 aaPredicted RBP12.26□□□□□ -0.45
ERCC3-201ENST00000285398 TRIM34Q9BYJ4 488 aa12.26□□□□□ -0.45
ERCC3-201ENST00000285398 TM6SF1Q9BZW5 370 aa12.26□□□□□ -0.45
ERCC3-201ENST00000285398 ZNF446Q9NWS9 450 aa12.26□□□□□ -0.45
ERCC3-201ENST00000285398 TFCP2L1Q9NZI6 479 aa12.26□□□□□ -0.45
ERCC3-201ENST00000285398 USP27XA6NNY8 438 aa12.25□□□□□ -0.45
ERCC3-201ENST00000285398 IRS4O14654 1257 aaPredicted RBP12.25□□□□□ -0.45
ERCC3-201ENST00000285398 H2AFXP16104 143 aaPredicted RBP12.25□□□□□ -0.45
ERCC3-201ENST00000285398 KCNB2Q92953 911 aa12.25□□□□□ -0.45
ERCC3-201ENST00000285398 DNAJC25Q9H1X3 360 aa12.25□□□□□ -0.45
ERCC3-201ENST00000285398 ZSWIM6Q9HCJ5 1215 aa12.25□□□□□ -0.45
ERCC3-201ENST00000285398 ST7Q9NRC1 585 aa12.25□□□□□ -0.45
ERCC3-201ENST00000285398 RC3H1Q5TC82 1133 aaKnown RBP12.25□□□□□ -0.45
ERCC3-201ENST00000285398 SPATA32Q96LK8 384 aa12.25□□□□□ -0.45
ERCC3-201ENST00000285398 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.25□□□□□ -0.45
ERCC3-201ENST00000285398 CYP46A1Q9Y6A2 500 aa12.25□□□□□ -0.45
ERCC3-201ENST00000285398 TRIM28Q13263 835 aaKnown RBP12.24□□□□□ -0.45
ERCC3-201ENST00000285398 HSP90AB3PQ58FF7 597 aa12.24□□□□□ -0.45
ERCC3-201ENST00000285398 CCAR2Q8N163 923 aaKnown RBP12.24□□□□□ -0.45
ERCC3-201ENST00000285398 RHPN1Q8TCX5 695 aa12.24□□□□□ -0.45
ERCC3-201ENST00000285398 NARFQ9UHQ1 456 aa12.24□□□□□ -0.45
ERCC3-201ENST00000285398 FEZ2Q9UHY8 353 aaPredicted RBP12.24□□□□□ -0.45
ERCC3-201ENST00000285398 PCCAP05165 728 aaPredicted RBP12.24□□□□□ -0.45
ERCC3-201ENST00000285398 TPM4P67936 248 aa12.24□□□□□ -0.45
ERCC3-201ENST00000285398 MTX1Q13505 466 aa12.24□□□□□ -0.45
ERCC3-201ENST00000285398 CWC27Q6UX04 472 aaKnown RBP12.24□□□□□ -0.45
ERCC3-201ENST00000285398 JAKMIP1Q96N16 626 aaKnown RBP12.24□□□□□ -0.45
ERCC3-201ENST00000285398 PUS3Q9BZE2 481 aaKnown RBP12.24□□□□□ -0.45
ERCC3-201ENST00000285398 NUP98P52948 1817 aa12.24□□□□□ -0.45
ERCC3-201ENST00000285398 CICQ96RK0 1608 aaPredicted RBP12.24□□□□□ -0.45
ERCC3-201ENST00000285398 USP42Q9H9J4 1324 aaKnown RBP12.24□□□□□ -0.45
ERCC3-201ENST00000285398 PTPN12Q05209 780 aaKnown RBP12.24□□□□□ -0.45
ERCC3-201ENST00000285398 RAD51AP2Q09MP3 1159 aa12.24□□□□□ -0.45
ERCC3-201ENST00000285398 ME3Q16798 604 aa12.24□□□□□ -0.45
ERCC3-201ENST00000285398 SLC27A3Q5K4L6 730 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms