RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 HAUS7Q99871 368 aa20.99■□□□□ 0.95
SKP2-201ENST00000274254 DENND2AQ9ULE3 1009 aa20.99■□□□□ 0.95
SKP2-201ENST00000274254 MYH13Q9UKX3 1938 aa20.99■□□□□ 0.95
SKP2-201ENST00000274254 SCN9AQ15858 1988 aa20.99■□□□□ 0.95
SKP2-201ENST00000274254 PDS5AQ29RF7 1337 aaKnown RBP20.99■□□□□ 0.95
SKP2-201ENST00000274254 DICER1Q9UPY3 1922 aaKnown RBP20.99■□□□□ 0.95
SKP2-201ENST00000274254 YDJCA8MPS7 323 aa20.99■□□□□ 0.95
SKP2-201ENST00000274254 PI16Q6UXB8 463 aa20.99■□□□□ 0.95
SKP2-201ENST00000274254 NIM1KQ8IY84 436 aa20.99■□□□□ 0.95
SKP2-201ENST00000274254 SPATA5Q8NB90 893 aa20.99■□□□□ 0.95
SKP2-201ENST00000274254 FRAT2O75474 233 aaPredicted RBP20.97■□□□□ 0.95
SKP2-201ENST00000274254 TTC22Q5TAA0 569 aa20.97■□□□□ 0.95
SKP2-201ENST00000274254 JDP2Q8WYK2 163 aa20.97■□□□□ 0.95
SKP2-201ENST00000274254 ZNRF3Q9ULT6 936 aa20.97■□□□□ 0.95
SKP2-201ENST00000274254 FAM205AQ6ZU69 1335 aa20.97■□□□□ 0.95
SKP2-201ENST00000274254 GSPT1P15170 499 aaKnown RBP20.96■□□□□ 0.95
SKP2-201ENST00000274254 ZAP70P43403 619 aa20.96■□□□□ 0.95
SKP2-201ENST00000274254 SNRKQ9NRH2 765 aa20.96■□□□□ 0.95
SKP2-201ENST00000274254 NDUFB9Q9Y6M9 179 aa20.96■□□□□ 0.95
SKP2-201ENST00000274254 KCNQ5Q9NR82 932 aa20.95■□□□□ 0.94
SKP2-201ENST00000274254 PSME4Q14997 1843 aa20.95■□□□□ 0.94
SKP2-201ENST00000274254 ZNF646O15015 1829 aaPredicted RBP20.95■□□□□ 0.94
SKP2-201ENST00000274254 FZD9O00144 591 aa20.94■□□□□ 0.94
SKP2-201ENST00000274254 CYP2E1P05181 493 aaPredicted RBP20.94■□□□□ 0.94
SKP2-201ENST00000274254 DNAJC2Q99543 621 aaKnown RBP20.94■□□□□ 0.94
SKP2-201ENST00000274254 GTF2IP78347 998 aa20.94■□□□□ 0.94
SKP2-201ENST00000274254 CHAF1AQ13111 956 aaPredicted RBP20.94■□□□□ 0.94
SKP2-201ENST00000274254 STRIP1Q5VSL9 837 aa20.94■□□□□ 0.94
SKP2-201ENST00000274254 TTLL5Q6EMB2 1281 aa20.94■□□□□ 0.94
SKP2-201ENST00000274254 WDR66Q8TBY9 1149 aa20.94■□□□□ 0.94
SKP2-201ENST00000274254 EDC3Q96F86 508 aaKnown RBP20.94■□□□□ 0.94
SKP2-201ENST00000274254 PAG1Q9NWQ8 432 aa20.94■□□□□ 0.94
SKP2-201ENST00000274254 SALL1Q9NSC2 1324 aa20.93■□□□□ 0.94
SKP2-201ENST00000274254 USP17L3A6NCW0 530 aa20.93■□□□□ 0.94
SKP2-201ENST00000274254 USP17L4A6NCW7 530 aa20.93■□□□□ 0.94
SKP2-201ENST00000274254 BMP2KLQ5H9B9 411 aa20.93■□□□□ 0.94
SKP2-201ENST00000274254 USP17L1Q7RTZ2 530 aa20.93■□□□□ 0.94
SKP2-201ENST00000274254 ANTXR1Q9H6X2 564 aa20.93■□□□□ 0.94
SKP2-201ENST00000274254 RNF181Q9P0P0 153 aa20.93■□□□□ 0.94
SKP2-201ENST00000274254 JAG2Q9Y219 1238 aa20.93■□□□□ 0.94
SKP2-201ENST00000274254 GOLIM4O00461 696 aa20.92■□□□□ 0.94
SKP2-201ENST00000274254 C9orf131Q5VYM1 1079 aa20.92■□□□□ 0.94
SKP2-201ENST00000274254 TBC1D22AQ8WUA7 517 aa20.92■□□□□ 0.94
SKP2-201ENST00000274254 MAP4K4O95819 1239 aaPredicted RBP20.91■□□□□ 0.94
SKP2-201ENST00000274254 FKBP1AP62942 108 aaKnown RBP20.91■□□□□ 0.94
SKP2-201ENST00000274254 CXCL9Q07325 125 aa20.91■□□□□ 0.94
SKP2-201ENST00000274254 TTF1Q15361 905 aaPredicted RBP20.91■□□□□ 0.94
SKP2-201ENST00000274254 DACT2Q5SW24 774 aa20.91■□□□□ 0.94
SKP2-201ENST00000274254 EVI5LQ96CN4 794 aa20.91■□□□□ 0.94
SKP2-201ENST00000274254 PIH1D3Q9NQM4 214 aaKnown RBP20.91■□□□□ 0.94
SKP2-201ENST00000274254 RAD17O75943 681 aa20.9■□□□□ 0.94
SKP2-201ENST00000274254 VIL1P09327 827 aaKnown RBP20.9■□□□□ 0.94
SKP2-201ENST00000274254 SDSP20132 328 aa20.9■□□□□ 0.94
SKP2-201ENST00000274254 MFSD14BQ5SR56 506 aa20.9■□□□□ 0.94
SKP2-201ENST00000274254 TBC1D9Q6ZT07 1266 aa20.9■□□□□ 0.94
SKP2-201ENST00000274254 TIAM2Q8IVF5 1701 aa20.9■□□□□ 0.94
SKP2-201ENST00000274254 DOCK2Q92608 1830 aa20.9■□□□□ 0.94
SKP2-201ENST00000274254 DCAF8L1A6NGE4 600 aa20.89■□□□□ 0.94
SKP2-201ENST00000274254 CNTROBQ8N137 903 aa20.89■□□□□ 0.94
SKP2-201ENST00000274254 ZGPATQ8N5A5 531 aaKnown RBP20.89■□□□□ 0.94
SKP2-201ENST00000274254 CERS5Q8N5B7 392 aa20.89■□□□□ 0.94
SKP2-201ENST00000274254 KBTBD3Q8NAB2 608 aa20.89■□□□□ 0.94
SKP2-201ENST00000274254 MYO5AQ9Y4I1 1855 aaKnown RBP20.89■□□□□ 0.94
SKP2-201ENST00000274254 TRIM6-TRIM34B2RNG4 842 aa20.88■□□□□ 0.93
SKP2-201ENST00000274254 PSMD14O00487 310 aa20.88■□□□□ 0.93
SKP2-201ENST00000274254 EIF6P56537 245 aaKnown RBP20.88■□□□□ 0.93
SKP2-201ENST00000274254 CIAPIN1Q6FI81 312 aa20.88■□□□□ 0.93
SKP2-201ENST00000274254 FBXW7Q969H0 707 aa20.88■□□□□ 0.93
SKP2-201ENST00000274254 SUGT1Q9Y2Z0 365 aa20.88■□□□□ 0.93
SKP2-201ENST00000274254 ZNF541Q9H0D2 1346 aa20.88■□□□□ 0.93
SKP2-201ENST00000274254 ZC3H4Q9UPT8 1303 aaKnown RBP20.88■□□□□ 0.93
SKP2-201ENST00000274254 MXD3Q9BW11 206 aa20.88■□□□□ 0.93
SKP2-201ENST00000274254 ABCF2Q9UG63 623 aa20.88■□□□□ 0.93
SKP2-201ENST00000274254 AK9Q5TCS8 1911 aa20.87■□□□□ 0.93
SKP2-201ENST00000274254 PRDX5P30044 214 aa20.87■□□□□ 0.93
SKP2-201ENST00000274254 TNIP1Q15025 636 aa20.87■□□□□ 0.93
SKP2-201ENST00000274254 GRIK5Q16478 980 aa20.87■□□□□ 0.93
SKP2-201ENST00000274254 RSBN1LQ6PCB5 846 aaPredicted RBP20.87■□□□□ 0.93
SKP2-201ENST00000274254 RILPL2Q969X0 211 aa20.87■□□□□ 0.93
SKP2-201ENST00000274254 MYO3BQ8WXR4 1341 aa20.86■□□□□ 0.93
SKP2-201ENST00000274254 IGSF3O75054 1194 aa20.86■□□□□ 0.93
SKP2-201ENST00000274254 SPTY2D1Q68D10 685 aaPredicted RBP20.86■□□□□ 0.93
SKP2-201ENST00000274254 ERICH6Q7L0X2 663 aa20.86■□□□□ 0.93
SKP2-201ENST00000274254 TICAM2Q86XR7 235 aa20.86■□□□□ 0.93
SKP2-201ENST00000274254 GMLQ99445 158 aa20.86■□□□□ 0.93
SKP2-201ENST00000274254 LRP2BPQ9P2M1 347 aa20.86■□□□□ 0.93
SKP2-201ENST00000274254 IDH1O75874 414 aaKnown RBP20.85■□□□□ 0.93
SKP2-201ENST00000274254 LDHBP07195 334 aaKnown RBP20.85■□□□□ 0.93
SKP2-201ENST00000274254 FSD1Q9BTV5 496 aa20.85■□□□□ 0.93
SKP2-201ENST00000274254 RFX7Q2KHR2 1363 aa20.85■□□□□ 0.93
SKP2-201ENST00000274254 MYH7P12883 1935 aa20.84■□□□□ 0.93
SKP2-201ENST00000274254 MAP3K12Q12852 859 aa20.84■□□□□ 0.93
SKP2-201ENST00000274254 AGBL3Q8NEM8 1001 aa20.84■□□□□ 0.93
SKP2-201ENST00000274254 GPC2Q8N158 579 aa20.83■□□□□ 0.93
SKP2-201ENST00000274254 ZNF384Q8TF68 577 aa20.83■□□□□ 0.93
SKP2-201ENST00000274254 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.83■□□□□ 0.93
SKP2-201ENST00000274254 RAI14Q9P0K7 980 aa20.83■□□□□ 0.93
SKP2-201ENST00000274254 MAST2Q6P0Q8 1798 aa20.83■□□□□ 0.92
SKP2-201ENST00000274254 MECOMQ03112 1051 aa20.83■□□□□ 0.92
SKP2-201ENST00000274254 NSUN4Q96CB9 384 aaKnown RBP20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms