RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 A0A087WZG4 1122 aa14.96□□□□□ -0.01
COL8A1-202ENST00000273342 KIF2AO00139 706 aaPredicted RBP14.96□□□□□ -0.01
COL8A1-202ENST00000273342 FKBP4Q02790 459 aaKnown RBP eCLIP14.96□□□□□ -0.01
COL8A1-202ENST00000273342 PDIA6Q15084 440 aa14.96□□□□□ -0.01
COL8A1-202ENST00000273342 SPECC1Q5M775 1068 aa14.96□□□□□ -0.01
COL8A1-202ENST00000273342 ORC3Q9UBD5 711 aaPredicted RBP14.96□□□□□ -0.01
COL8A1-202ENST00000273342 PHF8Q9UPP1 1060 aa14.96□□□□□ -0.01
COL8A1-202ENST00000273342 KIF28PB7ZC32 967 aa14.96□□□□□ -0.01
COL8A1-202ENST00000273342 EVCP57679 992 aa14.96□□□□□ -0.01
COL8A1-202ENST00000273342 TPM4P67936 248 aa14.96□□□□□ -0.01
COL8A1-202ENST00000273342 CCDC93Q567U6 631 aa14.96□□□□□ -0.01
COL8A1-202ENST00000273342 LMBR1LQ6UX01 489 aa14.96□□□□□ -0.01
COL8A1-202ENST00000273342 LLPHQ9BRT6 129 aaKnown RBP14.96□□□□□ -0.01
COL8A1-202ENST00000273342 CALCOCO1Q9P1Z2 691 aa14.96□□□□□ -0.01
COL8A1-202ENST00000273342 CPLX1O14810 134 aa14.95□□□□□ -0.02
COL8A1-202ENST00000273342 HSPD1P10809 573 aaKnown RBP14.95□□□□□ -0.02
COL8A1-202ENST00000273342 PFKFB1P16118 471 aa14.95□□□□□ -0.02
COL8A1-202ENST00000273342 CYP2C19P33261 490 aa14.95□□□□□ -0.02
COL8A1-202ENST00000273342 PNOCQ13519 176 aa14.95□□□□□ -0.02
COL8A1-202ENST00000273342 NCAPHQ15003 741 aa14.95□□□□□ -0.02
COL8A1-202ENST00000273342 CCDC85AQ96PX6 553 aaPredicted RBP14.95□□□□□ -0.02
COL8A1-202ENST00000273342 CHMP4AQ9BY43 222 aa14.95□□□□□ -0.02
COL8A1-202ENST00000273342 ZNF594Q96JF6 807 aaPredicted RBP14.95□□□□□ -0.02
COL8A1-202ENST00000273342 IMPACTQ9P2X3 320 aa14.95□□□□□ -0.02
COL8A1-202ENST00000273342 ZNF330Q9Y3S2 320 aaPredicted RBP14.95□□□□□ -0.02
COL8A1-202ENST00000273342 NALCNQ8IZF0 1738 aa14.95□□□□□ -0.02
COL8A1-202ENST00000273342 CACNA1FO60840 1977 aa14.95□□□□□ -0.02
COL8A1-202ENST00000273342 KLF18A0A0U1RQI7 1052 aa14.95□□□□□ -0.02
COL8A1-202ENST00000273342 GNG11P61952 73 aa14.95□□□□□ -0.02
COL8A1-202ENST00000273342 WASHC4Q2M389 1173 aa14.95□□□□□ -0.02
COL8A1-202ENST00000273342 KBTBD3Q8NAB2 608 aa14.95□□□□□ -0.02
COL8A1-202ENST00000273342 NFATC2IPQ8NCF5 419 aa14.95□□□□□ -0.02
COL8A1-202ENST00000273342 ARGLU1Q9NWB6 273 aaPredicted RBP14.95□□□□□ -0.02
COL8A1-202ENST00000273342 PAG1Q9NWQ8 432 aa14.95□□□□□ -0.02
COL8A1-202ENST00000273342 RGPD8O14715 1765 aaPredicted RBP14.94□□□□□ -0.02
COL8A1-202ENST00000273342 GOLGA8BA8MQT2 603 aa14.94□□□□□ -0.02
COL8A1-202ENST00000273342 WDHD1O75717 1129 aaPredicted RBP14.94□□□□□ -0.02
COL8A1-202ENST00000273342 SASH3O75995 380 aa14.94□□□□□ -0.02
COL8A1-202ENST00000273342 ANKRD13DQ6ZTN6 518 aa14.94□□□□□ -0.02
COL8A1-202ENST00000273342 SMARCE1Q969G3 411 aa14.94□□□□□ -0.02
COL8A1-202ENST00000273342 CLIC6Q96NY7 704 aa14.94□□□□□ -0.02
COL8A1-202ENST00000273342 DESI2Q9BSY9 194 aa14.94□□□□□ -0.02
COL8A1-202ENST00000273342 TRIM34Q9BYJ4 488 aa14.94□□□□□ -0.02
COL8A1-202ENST00000273342 LRRC37A3O60309 1634 aa14.94□□□□□ -0.02
COL8A1-202ENST00000273342 CRYBG1Q9Y4K1 1723 aa14.94□□□□□ -0.02
COL8A1-202ENST00000273342 EXOSC10Q01780 885 aaKnown RBP14.94□□□□□ -0.02
COL8A1-202ENST00000273342 KARSQ15046 597 aaKnown RBP14.94□□□□□ -0.02
COL8A1-202ENST00000273342 WDR24Q96S15 920 aa14.94□□□□□ -0.02
COL8A1-202ENST00000273342 HAUS7Q99871 368 aa14.94□□□□□ -0.02
COL8A1-202ENST00000273342 RTEL1Q9NZ71 1219 aa14.94□□□□□ -0.02
COL8A1-202ENST00000273342 PSDA5PKW4 1024 aaPredicted RBP14.93□□□□□ -0.02
COL8A1-202ENST00000273342 ADKP55263 362 aaKnown RBP14.93□□□□□ -0.02
COL8A1-202ENST00000273342 NLRP12P59046 1061 aa14.93□□□□□ -0.02
COL8A1-202ENST00000273342 TRIM65Q6PJ69 517 aa14.93□□□□□ -0.02
COL8A1-202ENST00000273342 THEMISQ8N1K5 641 aaPredicted RBP14.93□□□□□ -0.02
COL8A1-202ENST00000273342 IRX2Q9BZI1 471 aaPredicted RBP14.93□□□□□ -0.02
COL8A1-202ENST00000273342 FANCLQ9NW38 375 aa14.93□□□□□ -0.02
COL8A1-202ENST00000273342 DENND2AQ9ULE3 1009 aa14.93□□□□□ -0.02
COL8A1-202ENST00000273342 MROH7-TTC4A0A0A0MT08 1334 aa14.93□□□□□ -0.02
COL8A1-202ENST00000273342 HMGB1P09429 215 aaKnown RBP14.93□□□□□ -0.02
COL8A1-202ENST00000273342 TOP1P11387 765 aaKnown RBP14.93□□□□□ -0.02
COL8A1-202ENST00000273342 OAS2P29728 719 aaKnown RBP14.93□□□□□ -0.02
COL8A1-202ENST00000273342 MYSM1Q5VVJ2 828 aa14.93□□□□□ -0.02
COL8A1-202ENST00000273342 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.93□□□□□ -0.02
COL8A1-202ENST00000273342 PXDNQ92626 1479 aa14.93□□□□□ -0.02
COL8A1-202ENST00000273342 PIK3C2AO00443 1686 aa14.93□□□□□ -0.02
COL8A1-202ENST00000273342 KRBA2Q6ZNG9 492 aa14.92□□□□□ -0.02
COL8A1-202ENST00000273342 M0R2C6 588 aa14.92□□□□□ -0.02
COL8A1-202ENST00000273342 RFX5P48382 616 aaPredicted RBP14.92□□□□□ -0.02
COL8A1-202ENST00000273342 NLRP2Q9NX02 1062 aa14.92□□□□□ -0.02
COL8A1-202ENST00000273342 NEDD4P46934 1319 aa14.92□□□□□ -0.02
COL8A1-202ENST00000273342 FOXN1O15353 648 aa14.92□□□□□ -0.02
COL8A1-202ENST00000273342 SYKP43405 635 aa14.92□□□□□ -0.02
COL8A1-202ENST00000273342 ZNF496Q96IT1 587 aaPredicted RBP14.92□□□□□ -0.02
COL8A1-202ENST00000273342 HSD3B7Q9H2F3 369 aa14.92□□□□□ -0.02
COL8A1-202ENST00000273342 COPRSQ9NQ92 184 aa14.92□□□□□ -0.02
COL8A1-202ENST00000273342 MAST3O60307 1309 aa14.91□□□□□ -0.02
COL8A1-202ENST00000273342 UBE2Q2LH0YL09 131 aa14.91□□□□□ -0.02
COL8A1-202ENST00000273342 CSB-PGBD3P0DP91 1061 aa14.91□□□□□ -0.02
COL8A1-202ENST00000273342 ZNF827Q17R98 1081 aa14.91□□□□□ -0.02
COL8A1-202ENST00000273342 KCNG4Q8TDN1 519 aa14.91□□□□□ -0.02
COL8A1-202ENST00000273342 CABLES1Q8TDN4 633 aa14.91□□□□□ -0.02
COL8A1-202ENST00000273342 METTL22Q9BUU2 404 aaPredicted RBP14.91□□□□□ -0.02
COL8A1-202ENST00000273342 PARP3Q9Y6F1 533 aa14.91□□□□□ -0.02
COL8A1-202ENST00000273342 TADA3O75528 432 aa14.91□□□□□ -0.02
COL8A1-202ENST00000273342 ZRANB2O95218 330 aaKnown RBP eCLIP14.91□□□□□ -0.02
COL8A1-202ENST00000273342 RAD51AP2Q09MP3 1159 aa14.91□□□□□ -0.02
COL8A1-202ENST00000273342 LRRC24Q50LG9 513 aa14.91□□□□□ -0.02
COL8A1-202ENST00000273342 ANO1Q5XXA6 986 aa14.91□□□□□ -0.02
COL8A1-202ENST00000273342 ZNF790Q6PG37 636 aa14.91□□□□□ -0.02
COL8A1-202ENST00000273342 REXO1L1PQ8IX06 675 aa14.91□□□□□ -0.02
COL8A1-202ENST00000273342 TRMT44Q8IYL2 757 aaKnown RBP14.91□□□□□ -0.02
COL8A1-202ENST00000273342 ANKRD24Q8TF21 1146 aa14.91□□□□□ -0.02
COL8A1-202ENST00000273342 JCADQ9P266 1359 aa14.91□□□□□ -0.02
COL8A1-202ENST00000273342 PRC1O43663 620 aa14.9□□□□□ -0.02
COL8A1-202ENST00000273342 IFIT1P09914 478 aaKnown RBP14.9□□□□□ -0.02
COL8A1-202ENST00000273342 FBXO18Q8NFZ0 1043 aa14.9□□□□□ -0.02
COL8A1-202ENST00000273342 PHKBQ93100 1093 aa14.9□□□□□ -0.02
COL8A1-202ENST00000273342 OSBP2Q969R2 916 aa14.9□□□□□ -0.02
COL8A1-202ENST00000273342 AXIN2Q9Y2T1 843 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms