RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 COMMD8Q9NX08 183 aa10.14□□□□□ -0.79
CTDSPL-201ENST00000273179 EIF3AQ14152 1382 aaKnown RBP10.14□□□□□ -0.79
CTDSPL-201ENST00000273179 TTC37Q6PGP7 1564 aa10.14□□□□□ -0.79
CTDSPL-201ENST00000273179 KIAA1107Q9UPP5 1409 aa10.14□□□□□ -0.79
CTDSPL-201ENST00000273179 CCDC159P0C7I6 412 aa10.13□□□□□ -0.79
CTDSPL-201ENST00000273179 CLCN2P51788 898 aa10.13□□□□□ -0.79
CTDSPL-201ENST00000273179 ARPC4P59998 168 aa10.13□□□□□ -0.79
CTDSPL-201ENST00000273179 CEP57Q86XR8 500 aa10.13□□□□□ -0.79
CTDSPL-201ENST00000273179 CCDC112Q8NEF3 446 aa10.13□□□□□ -0.79
CTDSPL-201ENST00000273179 HPS3Q969F9 1004 aa10.13□□□□□ -0.79
CTDSPL-201ENST00000273179 DHRS1Q96LJ7 313 aa10.13□□□□□ -0.79
CTDSPL-201ENST00000273179 NSRP1Q9H0G5 558 aaKnown RBP10.13□□□□□ -0.79
CTDSPL-201ENST00000273179 PANK3Q9H999 370 aa10.13□□□□□ -0.79
CTDSPL-201ENST00000273179 NUDCQ9Y266 331 aa10.13□□□□□ -0.79
CTDSPL-201ENST00000273179 MBD5Q9P267 1494 aa10.13□□□□□ -0.79
CTDSPL-201ENST00000273179 H0Y3Z8 333 aa10.13□□□□□ -0.79
CTDSPL-201ENST00000273179 GNPTABQ3T906 1256 aa10.13□□□□□ -0.79
CTDSPL-201ENST00000273179 FAM9CQ8IZT9 166 aa10.13□□□□□ -0.79
CTDSPL-201ENST00000273179 FNBP4Q8N3X1 1017 aaPredicted RBP10.13□□□□□ -0.79
CTDSPL-201ENST00000273179 KIAA1468Q9P260 1216 aa10.13□□□□□ -0.79
CTDSPL-201ENST00000273179 TEX14Q8IWB6 1497 aa10.13□□□□□ -0.79
CTDSPL-201ENST00000273179 PFDN1O60925 122 aa10.13□□□□□ -0.79
CTDSPL-201ENST00000273179 ATP6V1G1O75348 118 aa10.13□□□□□ -0.79
CTDSPL-201ENST00000273179 GCFC2P16383 781 aaKnown RBP10.13□□□□□ -0.79
CTDSPL-201ENST00000273179 NEK2P51955 445 aa10.13□□□□□ -0.79
CTDSPL-201ENST00000273179 PPP2R5CQ13362 524 aa10.13□□□□□ -0.79
CTDSPL-201ENST00000273179 IQCB1Q15051 598 aa10.13□□□□□ -0.79
CTDSPL-201ENST00000273179 ITSN2Q9NZM3 1697 aa10.13□□□□□ -0.79
CTDSPL-201ENST00000273179 MPP3Q13368 585 aa10.13□□□□□ -0.79
CTDSPL-201ENST00000273179 Q4G0T1 1027 aa10.13□□□□□ -0.79
CTDSPL-201ENST00000273179 MIEF2Q96C03 454 aa10.13□□□□□ -0.79
CTDSPL-201ENST00000273179 ALDH8A1Q9H2A2 487 aaPredicted RBP10.13□□□□□ -0.79
CTDSPL-201ENST00000273179 ZSWIM4Q9H7M6 989 aa10.13□□□□□ -0.79
CTDSPL-201ENST00000273179 GJA3Q9Y6H8 435 aa10.13□□□□□ -0.79
CTDSPL-201ENST00000273179 KIF5BP33176 963 aa10.12□□□□□ -0.79
CTDSPL-201ENST00000273179 TSNAXIP1Q2TAA8 658 aa10.12□□□□□ -0.79
CTDSPL-201ENST00000273179 CEP135Q66GS9 1140 aa10.12□□□□□ -0.79
CTDSPL-201ENST00000273179 KAZNQ674X7 775 aa10.12□□□□□ -0.79
CTDSPL-201ENST00000273179 SHQ1Q6PI26 577 aaKnown RBP10.12□□□□□ -0.79
CTDSPL-201ENST00000273179 CEP128Q6ZU80 1094 aa10.12□□□□□ -0.79
CTDSPL-201ENST00000273179 RELL1Q8IUW5 271 aa10.12□□□□□ -0.79
CTDSPL-201ENST00000273179 RBM12BQ8IXT5 1001 aaKnown RBP10.12□□□□□ -0.79
CTDSPL-201ENST00000273179 OSBPL10Q9BXB5 764 aa10.12□□□□□ -0.79
CTDSPL-201ENST00000273179 BNIP1Q12981 228 aa10.12□□□□□ -0.79
CTDSPL-201ENST00000273179 C4orf46Q504U0 113 aa10.12□□□□□ -0.79
CTDSPL-201ENST00000273179 RNF187Q5TA31 235 aaPredicted RBP10.12□□□□□ -0.79
CTDSPL-201ENST00000273179 ANKRD13BQ86YJ7 626 aa10.12□□□□□ -0.79
CTDSPL-201ENST00000273179 SLC43A3Q8NBI5 491 aa10.12□□□□□ -0.79
CTDSPL-201ENST00000273179 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.12□□□□□ -0.79
CTDSPL-201ENST00000273179 MYBBP1AQ9BQG0 1328 aaKnown RBP10.12□□□□□ -0.79
CTDSPL-201ENST00000273179 SAMD9LQ8IVG5 1584 aa10.12□□□□□ -0.79
CTDSPL-201ENST00000273179 FIBPO43427 364 aa10.12□□□□□ -0.79
CTDSPL-201ENST00000273179 PYGLP06737 847 aa10.12□□□□□ -0.79
CTDSPL-201ENST00000273179 TUFMP49411 452 aaKnown RBP10.12□□□□□ -0.79
CTDSPL-201ENST00000273179 GKAP1Q5VSY0 366 aaPredicted RBP10.12□□□□□ -0.79
CTDSPL-201ENST00000273179 SPATA21Q7Z572 469 aa10.12□□□□□ -0.79
CTDSPL-201ENST00000273179 SPC25Q9HBM1 224 aa10.12□□□□□ -0.79
CTDSPL-201ENST00000273179 PLEKHH2Q8IVE3 1493 aa10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 ST20-MTHFSA0A0A6YYL1 179 aa10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 CYP11B2P19099 503 aa10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 TMOD1P28289 359 aa10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 SMARCA1P28370 1054 aa10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 ZNF132P52740 706 aa10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 C11orf91Q3C1V1 193 aa10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 ALDH1L2Q3SY69 923 aa10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 ISM2Q6H9L7 571 aa10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 DAAM2Q86T65 1068 aa10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 PDGFDQ9GZP0 370 aaPredicted RBP10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 RPAP3Q9H6T3 665 aaPredicted RBP10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 KIF9Q9HAQ2 790 aa10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 DKK3Q9UBP4 350 aa10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 MAFFQ9ULX9 164 aa10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 PCDHGA4Q9Y5G9 962 aa10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 ENO4A6NNW6 628 aa10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 BIN1O00499 593 aa10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 PRC1O43663 620 aa10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 TRPC1P48995 793 aa10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 COL19A1Q14993 1142 aa10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 CCDC40Q4G0X9 1142 aa10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 PARP10Q53GL7 1025 aa10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 NCAPG2Q86XI2 1143 aa10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 KRT82Q9NSB4 513 aa10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 SSX2IPQ9Y2D8 614 aa10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 SUN5Q8TC36 379 aa10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.11□□□□□ -0.799e-6■□□□□ 9.3
CTDSPL-201ENST00000273179 NEMFO60524 1076 aa10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 DIAPH1O60610 1272 aaKnown RBP10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 DCTN1Q14203 1278 aa10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 TMCO3Q6UWJ1 677 aa10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 XPO4Q9C0E2 1151 aaKnown RBP10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 TBK1Q9UHD2 729 aa10.11□□□□□ -0.79
CTDSPL-201ENST00000273179 MAP7Q14244 749 aa10.1□□□□□ -0.79
CTDSPL-201ENST00000273179 ZNF304Q9HCX3 659 aa10.1□□□□□ -0.79
CTDSPL-201ENST00000273179 CARD8Q9Y2G2 431 aa10.1□□□□□ -0.79
CTDSPL-201ENST00000273179 ARHGEF12Q9NZN5 1544 aa10.1□□□□□ -0.79
CTDSPL-201ENST00000273179 NEK9Q8TD19 979 aa10.1□□□□□ -0.79
CTDSPL-201ENST00000273179 PLEKHG4BQ96PX9 1271 aa10.1□□□□□ -0.79
CTDSPL-201ENST00000273179 ADCY10Q96PN6 1610 aa10.1□□□□□ -0.79
CTDSPL-201ENST00000273179 CDC42BPBQ9Y5S2 1711 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms