RNA–Protein interactions for RNA: ENST00000269217.10

LAMA3-201, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-201ENST00000269217 WDR78Q5VTH9 848 aa11.59□□□□□ -0.55
LAMA3-201ENST00000269217 LMBR1Q8WVP7 490 aa11.59□□□□□ -0.55
LAMA3-201ENST00000269217 MMRN2Q9H8L6 949 aa11.59□□□□□ -0.55
LAMA3-201ENST00000269217 ZNF219Q9P2Y4 722 aaPredicted RBP11.59□□□□□ -0.55
LAMA3-201ENST00000269217 TEX14Q8IWB6 1497 aa11.59□□□□□ -0.55
LAMA3-201ENST00000269217 WDR7Q9Y4E6 1490 aa11.59□□□□□ -0.55
LAMA3-201ENST00000269217 IBSPP21815 317 aaPredicted RBP11.59□□□□□ -0.55
LAMA3-201ENST00000269217 DCAF5Q96JK2 942 aa11.59□□□□□ -0.55
LAMA3-201ENST00000269217 PUF60Q9UHX1 559 aaKnown RBP11.59□□□□□ -0.55
LAMA3-201ENST00000269217 NIP7Q9Y221 180 aaKnown RBP eCLIP11.59□□□□□ -0.55
LAMA3-201ENST00000269217 KRT79Q5XKE5 535 aa11.58□□□□□ -0.56
LAMA3-201ENST00000269217 BICD1Q96G01 975 aa11.58□□□□□ -0.56
LAMA3-201ENST00000269217 CCDC42Q96M95 316 aa11.58□□□□□ -0.56
LAMA3-201ENST00000269217 DRC1Q96MC2 740 aa11.58□□□□□ -0.56
LAMA3-201ENST00000269217 ELP1O95163 1332 aa11.58□□□□□ -0.56
LAMA3-201ENST00000269217 KDM2BQ8NHM5 1336 aa11.58□□□□□ -0.56
LAMA3-201ENST00000269217 TUBBP07437 444 aa11.58□□□□□ -0.56
LAMA3-201ENST00000269217 RPS6KB1P23443 525 aa11.58□□□□□ -0.56
LAMA3-201ENST00000269217 FAM160A1Q05DH4 1040 aa11.58□□□□□ -0.56
LAMA3-201ENST00000269217 MAPK8IP2Q13387 824 aaPredicted RBP11.58□□□□□ -0.56
LAMA3-201ENST00000269217 TRMT1LQ7Z2T5 733 aaKnown RBP11.58□□□□□ -0.56
LAMA3-201ENST00000269217 ZNF804AQ7Z570 1209 aa11.58□□□□□ -0.56
LAMA3-201ENST00000269217 FERMT1Q9BQL6 677 aa11.58□□□□□ -0.56
LAMA3-201ENST00000269217 DDX21Q9NR30 783 aaKnown RBP eCLIP11.58□□□□□ -0.56
LAMA3-201ENST00000269217 INSRP06213 1382 aa11.58□□□□□ -0.56
LAMA3-201ENST00000269217 RNMTO43148 476 aaKnown RBP11.58□□□□□ -0.56
LAMA3-201ENST00000269217 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.58□□□□□ -0.56
LAMA3-201ENST00000269217 MAGEB6Q8N7X4 407 aa11.58□□□□□ -0.56
LAMA3-201ENST00000269217 SBNO2Q9Y2G9 1366 aa11.58□□□□□ -0.56
LAMA3-201ENST00000269217 WDHD1O75717 1129 aaPredicted RBP11.58□□□□□ -0.56
LAMA3-201ENST00000269217 CHMP4BP1P59074 171 aa11.58□□□□□ -0.56
LAMA3-201ENST00000269217 MYL5Q02045 173 aa11.58□□□□□ -0.56
LAMA3-201ENST00000269217 IQUBQ8NA54 791 aa11.58□□□□□ -0.56
LAMA3-201ENST00000269217 RRP36Q96EU6 259 aaKnown RBP11.58□□□□□ -0.56
LAMA3-201ENST00000269217 DNAJC5BQ9UF47 199 aa11.58□□□□□ -0.56
LAMA3-201ENST00000269217 UBXN1Q04323 297 aa11.58□□□□□ -0.56
LAMA3-201ENST00000269217 DZIP3Q86Y13 1208 aaKnown RBP11.58□□□□□ -0.56
LAMA3-201ENST00000269217 NYXQ9GZU5 481 aa11.58□□□□□ -0.56
LAMA3-201ENST00000269217 HOMER2Q9NSB8 354 aa11.58□□□□□ -0.56
LAMA3-201ENST00000269217 RBM28Q9NW13 759 aaKnown RBP11.58□□□□□ -0.56
LAMA3-201ENST00000269217 IRS4O14654 1257 aaPredicted RBP11.57□□□□□ -0.56
LAMA3-201ENST00000269217 PZPP20742 1482 aa11.57□□□□□ -0.56
LAMA3-201ENST00000269217 HOXC9P31274 260 aa11.57□□□□□ -0.56
LAMA3-201ENST00000269217 NSRP1Q9H0G5 558 aaKnown RBP11.57□□□□□ -0.56
LAMA3-201ENST00000269217 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.57□□□□□ -0.56
LAMA3-201ENST00000269217 IKBKGQ9Y6K9 419 aa11.57□□□□□ -0.56
LAMA3-201ENST00000269217 DNMT1P26358 1616 aaKnown RBP11.57□□□□□ -0.56
LAMA3-201ENST00000269217 YTHDC2Q9H6S0 1430 aaKnown RBP11.57□□□□□ -0.56
LAMA3-201ENST00000269217 IL2RBP14784 551 aa11.57□□□□□ -0.56
LAMA3-201ENST00000269217 PLCG2P16885 1265 aa11.57□□□□□ -0.56
LAMA3-201ENST00000269217 GNA11P29992 359 aa11.57□□□□□ -0.56
LAMA3-201ENST00000269217 CNGA4Q8IV77 575 aa11.57□□□□□ -0.56
LAMA3-201ENST00000269217 HOXB7P09629 217 aa11.57□□□□□ -0.56
LAMA3-201ENST00000269217 LLPHQ9BRT6 129 aaKnown RBP11.57□□□□□ -0.56
LAMA3-201ENST00000269217 STX17P56962 302 aa11.56□□□□□ -0.56
LAMA3-201ENST00000269217 SYT10Q6XYQ8 523 aa11.56□□□□□ -0.56
LAMA3-201ENST00000269217 DTHD1Q6ZMT9 781 aa11.56□□□□□ -0.56
LAMA3-201ENST00000269217 NEK11Q8NG66 645 aa11.56□□□□□ -0.56
LAMA3-201ENST00000269217 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.56□□□□□ -0.56
LAMA3-201ENST00000269217 V9GYY5 206 aaPredicted RBP11.56□□□□□ -0.56
LAMA3-201ENST00000269217 MAP3K19Q56UN5 1328 aa11.56□□□□□ -0.56
LAMA3-201ENST00000269217 SMARCC2Q8TAQ2 1214 aa11.56□□□□□ -0.56
LAMA3-201ENST00000269217 IP6K1Q92551 441 aa11.56□□□□□ -0.56
LAMA3-201ENST00000269217 ZNF622Q969S3 477 aaKnown RBP eCLIP11.56□□□□□ -0.56
LAMA3-201ENST00000269217 MPHOSPH6Q99547 160 aaKnown RBP11.56□□□□□ -0.56
LAMA3-201ENST00000269217 SIRT1Q96EB6 747 aa11.56□□□□□ -0.56
LAMA3-201ENST00000269217 CCDC94Q9BW85 323 aaPredicted RBP11.56□□□□□ -0.56
LAMA3-201ENST00000269217 STMN4Q9H169 189 aaPredicted RBP11.56□□□□□ -0.56
LAMA3-201ENST00000269217 LUC7L2Q9Y383 392 aaKnown RBP11.56□□□□□ -0.56
LAMA3-201ENST00000269217 HSPA4P34932 840 aa11.56□□□□□ -0.56
LAMA3-201ENST00000269217 KARSQ15046 597 aaKnown RBP11.56□□□□□ -0.56
LAMA3-201ENST00000269217 C6orf163Q5TEZ5 329 aa11.56□□□□□ -0.56
LAMA3-201ENST00000269217 G2E3Q7L622 706 aa11.56□□□□□ -0.56
LAMA3-201ENST00000269217 DMRT2Q9Y5R5 561 aa11.56□□□□□ -0.56
LAMA3-201ENST00000269217 A0A1W2PRG0 241 aa11.55□□□□□ -0.56
LAMA3-201ENST00000269217 MCM7P33993 719 aa11.55□□□□□ -0.56
LAMA3-201ENST00000269217 ZNF569Q5MCW4 686 aa11.55□□□□□ -0.56
LAMA3-201ENST00000269217 CCDC77Q9BR77 488 aa11.55□□□□□ -0.56
LAMA3-201ENST00000269217 MCM9Q9NXL9 1143 aa11.55□□□□□ -0.56
LAMA3-201ENST00000269217 GUCA1BQ9UMX6 200 aa11.55□□□□□ -0.56
LAMA3-201ENST00000269217 SLC27A2O14975 620 aa11.55□□□□□ -0.56
LAMA3-201ENST00000269217 MIGA1Q8NAN2 632 aa11.55□□□□□ -0.56
LAMA3-201ENST00000269217 RBSNQ9H1K0 784 aa11.55□□□□□ -0.56
LAMA3-201ENST00000269217 LZTFL1Q9NQ48 299 aa11.55□□□□□ -0.56
LAMA3-201ENST00000269217 PPP1R2P41236 205 aa11.55□□□□□ -0.56
LAMA3-201ENST00000269217 TTLL12Q14166 644 aaPredicted RBP11.55□□□□□ -0.56
LAMA3-201ENST00000269217 RILPL1Q5EBL4 403 aa11.55□□□□□ -0.56
LAMA3-201ENST00000269217 EDC4Q6P2E9 1401 aaKnown RBP11.55□□□□□ -0.56
LAMA3-201ENST00000269217 A0A1B0GVL5 298 aa11.55□□□□□ -0.56
LAMA3-201ENST00000269217 CPA1P15085 419 aa11.55□□□□□ -0.56
LAMA3-201ENST00000269217 IL13P35225 146 aa11.55□□□□□ -0.56
LAMA3-201ENST00000269217 TMEM87BQ96K49 555 aa11.55□□□□□ -0.56
LAMA3-201ENST00000269217 SNX14Q9Y5W7 946 aa11.55□□□□□ -0.56
LAMA3-201ENST00000269217 GCP02774 474 aa11.55□□□□□ -0.56
LAMA3-201ENST00000269217 TICAM2Q86XR7 235 aa11.55□□□□□ -0.56
LAMA3-201ENST00000269217 PICALMQ13492 652 aa11.54□□□□□ -0.56
LAMA3-201ENST00000269217 OTUD7AQ8TE49 926 aaPredicted RBP11.54□□□□□ -0.56
LAMA3-201ENST00000269217 BAG1Q99933 345 aaPredicted RBP11.54□□□□□ -0.56
LAMA3-201ENST00000269217 RSPH14Q9UHP6 348 aa11.54□□□□□ -0.56
LAMA3-201ENST00000269217 SPDYE3A6NKU9 549 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms