RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 C15orf52Q6ZUT6 534 aaKnown RBP19.6■□□□□ 0.73
TPM1-201ENST00000267996 PUS7LQ9H0K6 701 aaKnown RBP19.6■□□□□ 0.73
TPM1-201ENST00000267996 SLKQ9H2G2 1235 aaPredicted RBP19.6■□□□□ 0.73
TPM1-201ENST00000267996 COL1A1P02452 1464 aaPredicted RBP19.59■□□□□ 0.73
TPM1-201ENST00000267996 MAP3K12Q12852 859 aa19.59■□□□□ 0.73
TPM1-201ENST00000267996 ADCK5Q3MIX3 580 aa19.59■□□□□ 0.73
TPM1-201ENST00000267996 TMC4Q7Z404 712 aa19.59■□□□□ 0.73
TPM1-201ENST00000267996 WWC3Q9ULE0 1092 aa19.59■□□□□ 0.73
TPM1-201ENST00000267996 DENND2AQ9ULE3 1009 aa19.59■□□□□ 0.73
TPM1-201ENST00000267996 JAKMIP1Q96N16 626 aaKnown RBP19.59■□□□□ 0.73
TPM1-201ENST00000267996 ZNF532Q9HCE3 1301 aa19.58■□□□□ 0.72
TPM1-201ENST00000267996 FOXP2O15409 715 aa19.58■□□□□ 0.72
TPM1-201ENST00000267996 SRGNP10124 158 aa19.58■□□□□ 0.72
TPM1-201ENST00000267996 HIBADHP31937 336 aaKnown RBP19.58■□□□□ 0.72
TPM1-201ENST00000267996 VPS37DQ86XT2 251 aa19.58■□□□□ 0.72
TPM1-201ENST00000267996 SPRYD3Q8NCJ5 442 aa19.58■□□□□ 0.72
TPM1-201ENST00000267996 LRRC37AA6NMS7 1700 aa19.57■□□□□ 0.72
TPM1-201ENST00000267996 CASTP20810 708 aaKnown RBP19.57■□□□□ 0.72
TPM1-201ENST00000267996 PSMA5P28066 241 aa19.57■□□□□ 0.72
TPM1-201ENST00000267996 PDE6BP35913 854 aa19.57■□□□□ 0.72
TPM1-201ENST00000267996 KRT32Q14532 448 aa19.57■□□□□ 0.72
TPM1-201ENST00000267996 MSL1Q68DK7 614 aa19.57■□□□□ 0.72
TPM1-201ENST00000267996 DEFB132Q7Z7B7 95 aa19.57■□□□□ 0.72
TPM1-201ENST00000267996 SLC51AQ86UW1 340 aa19.57■□□□□ 0.72
TPM1-201ENST00000267996 PODXL2Q9NZ53 605 aa19.57■□□□□ 0.72
TPM1-201ENST00000267996 ANKIB1Q9P2G1 1089 aa19.57■□□□□ 0.72
TPM1-201ENST00000267996 TAF6LQ9Y6J9 622 aa19.57■□□□□ 0.72
TPM1-201ENST00000267996 GPAA1O43292 621 aa19.56■□□□□ 0.72
TPM1-201ENST00000267996 CYP21A2P08686 494 aa19.56■□□□□ 0.72
TPM1-201ENST00000267996 NPR1P16066 1061 aa19.56■□□□□ 0.72
TPM1-201ENST00000267996 GPSM2P81274 684 aa19.56■□□□□ 0.72
TPM1-201ENST00000267996 TXNRD3Q86VQ6 643 aa19.56■□□□□ 0.72
TPM1-201ENST00000267996 IQSEC3Q9UPP2 1182 aaPredicted RBP19.56■□□□□ 0.72
TPM1-201ENST00000267996 ATP2B4P23634 1241 aa19.56■□□□□ 0.72
TPM1-201ENST00000267996 RUFY3Q7L099 469 aa19.56■□□□□ 0.72
TPM1-201ENST00000267996 TMX3Q96JJ7 454 aa19.56■□□□□ 0.72
TPM1-201ENST00000267996 CHMP5Q9NZZ3 219 aa19.56■□□□□ 0.72
TPM1-201ENST00000267996 CYP46A1Q9Y6A2 500 aa19.56■□□□□ 0.72
TPM1-201ENST00000267996 CUL4AQ13619 759 aa19.55■□□□□ 0.72
TPM1-201ENST00000267996 SP8Q8IXZ3 490 aa19.55■□□□□ 0.72
TPM1-201ENST00000267996 MAGEB6Q8N7X4 407 aa19.55■□□□□ 0.72
TPM1-201ENST00000267996 CIZ1Q9ULV3 898 aaPredicted RBP19.55■□□□□ 0.72
TPM1-201ENST00000267996 LTBP1Q14766 1721 aa19.54■□□□□ 0.72
TPM1-201ENST00000267996 ALDH8A1Q9H2A2 487 aaPredicted RBP19.54■□□□□ 0.72
TPM1-201ENST00000267996 LRP2BPQ9P2M1 347 aa19.54■□□□□ 0.72
TPM1-201ENST00000267996 CTNNA3Q9UI47 895 aa19.54■□□□□ 0.72
TPM1-201ENST00000267996 COL11A2P13942 1736 aaPredicted RBP19.53■□□□□ 0.72
TPM1-201ENST00000267996 CPA1P15085 419 aa19.53■□□□□ 0.72
TPM1-201ENST00000267996 AK2P54819 239 aa19.53■□□□□ 0.72
TPM1-201ENST00000267996 STRBPQ96SI9 672 aaKnown RBP19.53■□□□□ 0.72
TPM1-201ENST00000267996 ATP6V0A2Q9Y487 856 aa19.53■□□□□ 0.72
TPM1-201ENST00000267996 MYH13Q9UKX3 1938 aa19.53■□□□□ 0.72
TPM1-201ENST00000267996 PPEF1O14829 653 aaPredicted RBP19.52■□□□□ 0.72
TPM1-201ENST00000267996 HSP90AA1P07900 732 aaKnown RBP19.52■□□□□ 0.72
TPM1-201ENST00000267996 ALDH1B1P30837 517 aa19.52■□□□□ 0.72
TPM1-201ENST00000267996 CCDC125Q86Z20 511 aa19.52■□□□□ 0.72
TPM1-201ENST00000267996 MASTLQ96GX5 879 aa19.52■□□□□ 0.72
TPM1-201ENST00000267996 PDRG1Q9NUG6 133 aa19.52■□□□□ 0.72
TPM1-201ENST00000267996 GGA1Q9UJY5 639 aa19.52■□□□□ 0.72
TPM1-201ENST00000267996 NSFL1CQ9UNZ2 370 aaKnown RBP19.52■□□□□ 0.72
TPM1-201ENST00000267996 FGAP02671 866 aa19.52■□□□□ 0.71
TPM1-201ENST00000267996 RPS6KB1P23443 525 aa19.52■□□□□ 0.71
TPM1-201ENST00000267996 BLOC1S2Q6QNY1 142 aa19.52■□□□□ 0.71
TPM1-201ENST00000267996 TDRD7Q8NHU6 1098 aaKnown RBP19.52■□□□□ 0.71
TPM1-201ENST00000267996 CACNA1SQ13698 1873 aa19.51■□□□□ 0.71
TPM1-201ENST00000267996 IGSF3O75054 1194 aa19.51■□□□□ 0.71
TPM1-201ENST00000267996 UFL1O94874 794 aa19.51■□□□□ 0.71
TPM1-201ENST00000267996 COL9A3Q14050 684 aaPredicted RBP19.51■□□□□ 0.71
TPM1-201ENST00000267996 ALX1Q15699 326 aa19.51■□□□□ 0.71
TPM1-201ENST00000267996 STOX1Q6ZVD7 989 aa19.51■□□□□ 0.71
TPM1-201ENST00000267996 NEK1Q96PY6 1258 aa19.51■□□□□ 0.71
TPM1-201ENST00000267996 TTLL5Q6EMB2 1281 aa19.5■□□□□ 0.71
TPM1-201ENST00000267996 TMED8Q6PL24 325 aaPredicted RBP19.5■□□□□ 0.71
TPM1-201ENST00000267996 TBC1D16Q8TBP0 767 aa19.5■□□□□ 0.71
TPM1-201ENST00000267996 AIDAQ96BJ3 306 aa19.5■□□□□ 0.71
TPM1-201ENST00000267996 INTS4Q96HW7 963 aaKnown RBP19.5■□□□□ 0.71
TPM1-201ENST00000267996 CWC22Q9HCG8 908 aaKnown RBP19.5■□□□□ 0.71
TPM1-201ENST00000267996 ABCF2Q9UG63 623 aa19.5■□□□□ 0.71
TPM1-201ENST00000267996 LIMCH1Q9UPQ0 1083 aa19.5■□□□□ 0.71
TPM1-201ENST00000267996 SALL1Q9NSC2 1324 aa19.5■□□□□ 0.71
TPM1-201ENST00000267996 FRAT2O75474 233 aaPredicted RBP19.49■□□□□ 0.71
TPM1-201ENST00000267996 STYK1Q6J9G0 422 aa19.49■□□□□ 0.71
TPM1-201ENST00000267996 ZNF804AQ7Z570 1209 aa19.49■□□□□ 0.71
TPM1-201ENST00000267996 FOXD4L1Q9NU39 408 aa19.49■□□□□ 0.71
TPM1-201ENST00000267996 POLLQ9UGP5 575 aa19.49■□□□□ 0.71
TPM1-201ENST00000267996 ZMYM6O95789 1325 aa19.49■□□□□ 0.71
TPM1-201ENST00000267996 A0A0G2JLW4 131 aa19.49■□□□□ 0.71
TPM1-201ENST00000267996 MBD4O95243 580 aa19.49■□□□□ 0.71
TPM1-201ENST00000267996 HMGB1P09429 215 aaKnown RBP19.49■□□□□ 0.71
TPM1-201ENST00000267996 CYP7A1P22680 504 aa19.49■□□□□ 0.71
TPM1-201ENST00000267996 ANP32EQ9BTT0 268 aa19.49■□□□□ 0.71
TPM1-201ENST00000267996 RAI14Q9P0K7 980 aa19.49■□□□□ 0.71
TPM1-201ENST00000267996 IMMTQ16891 758 aaKnown RBP19.48■□□□□ 0.71
TPM1-201ENST00000267996 C2CD5Q86YS7 1000 aa19.48■□□□□ 0.71
TPM1-201ENST00000267996 ZNF384Q8TF68 577 aa19.48■□□□□ 0.71
TPM1-201ENST00000267996 SLC16A10Q8TF71 515 aa19.48■□□□□ 0.71
TPM1-201ENST00000267996 PDGFDQ9GZP0 370 aaPredicted RBP19.48■□□□□ 0.71
TPM1-201ENST00000267996 PATL2C9JE40 543 aaKnown RBP19.47■□□□□ 0.71
TPM1-201ENST00000267996 E7EWF7 191 aa19.47■□□□□ 0.71
TPM1-201ENST00000267996 IL1R1P14778 569 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms