RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 DENND2AQ9ULE3 1009 aa17.48■□□□□ 0.39
SSBP1-201ENST00000265304 AOX1Q06278 1338 aa17.47■□□□□ 0.39
SSBP1-201ENST00000265304 DOCK2Q92608 1830 aa17.47■□□□□ 0.39
SSBP1-201ENST00000265304 USP17L3A6NCW0 530 aa17.47■□□□□ 0.39
SSBP1-201ENST00000265304 USP17L4A6NCW7 530 aa17.47■□□□□ 0.39
SSBP1-201ENST00000265304 MMP14P50281 582 aa17.47■□□□□ 0.39
SSBP1-201ENST00000265304 RASGRF1Q13972 1273 aa17.47■□□□□ 0.39
SSBP1-201ENST00000265304 DACT2Q5SW24 774 aa17.47■□□□□ 0.39
SSBP1-201ENST00000265304 USP17L1Q7RTZ2 530 aa17.47■□□□□ 0.39
SSBP1-201ENST00000265304 VPS37DQ86XT2 251 aa17.47■□□□□ 0.39
SSBP1-201ENST00000265304 PLEKHM2Q8IWE5 1019 aa17.47■□□□□ 0.39
SSBP1-201ENST00000265304 OTUD7AQ8TE49 926 aaPredicted RBP17.47■□□□□ 0.39
SSBP1-201ENST00000265304 LNPKQ9C0E8 428 aa17.47■□□□□ 0.39
SSBP1-201ENST00000265304 HMG20BQ9P0W2 317 aa17.47■□□□□ 0.39
SSBP1-201ENST00000265304 SUGT1Q9Y2Z0 365 aa17.47■□□□□ 0.39
SSBP1-201ENST00000265304 COL1A1P02452 1464 aaPredicted RBP17.47■□□□□ 0.39
SSBP1-201ENST00000265304 PDE4AP27815 886 aa17.46■□□□□ 0.39
SSBP1-201ENST00000265304 MCAMP43121 646 aa17.46■□□□□ 0.39
SSBP1-201ENST00000265304 PDE1AP54750 535 aa17.46■□□□□ 0.39
SSBP1-201ENST00000265304 SCARF1Q14162 830 aa17.46■□□□□ 0.39
SSBP1-201ENST00000265304 TNIP1Q15025 636 aa17.46■□□□□ 0.39
SSBP1-201ENST00000265304 GORABQ5T7V8 394 aa17.46■□□□□ 0.39
SSBP1-201ENST00000265304 TTLL5Q6EMB2 1281 aa17.46■□□□□ 0.39
SSBP1-201ENST00000265304 GPC2Q8N158 579 aa17.46■□□□□ 0.39
SSBP1-201ENST00000265304 PI4K2BQ8TCG2 481 aa17.46■□□□□ 0.39
SSBP1-201ENST00000265304 TBC1D22AQ8WUA7 517 aa17.46■□□□□ 0.39
SSBP1-201ENST00000265304 ZBTB47Q9UFB7 747 aaPredicted RBP17.46■□□□□ 0.39
SSBP1-201ENST00000265304 SCN4AP35499 1836 aa17.45■□□□□ 0.38
SSBP1-201ENST00000265304 MX1P20591 662 aa17.45■□□□□ 0.38
SSBP1-201ENST00000265304 EIF6P56537 245 aaKnown RBP17.45■□□□□ 0.38
SSBP1-201ENST00000265304 CIAPIN1Q6FI81 312 aa17.45■□□□□ 0.38
SSBP1-201ENST00000265304 TICAM2Q86XR7 235 aa17.45■□□□□ 0.38
SSBP1-201ENST00000265304 SPATA5Q8NB90 893 aa17.45■□□□□ 0.38
SSBP1-201ENST00000265304 WDR66Q8TBY9 1149 aa17.45■□□□□ 0.38
SSBP1-201ENST00000265304 DPF2Q92785 391 aa17.45■□□□□ 0.38
SSBP1-201ENST00000265304 MRIQ9BWK5 157 aa17.45■□□□□ 0.38
SSBP1-201ENST00000265304 MYH7P12883 1935 aa17.45■□□□□ 0.38
SSBP1-201ENST00000265304 MYO3BQ8WXR4 1341 aa17.45■□□□□ 0.38
SSBP1-201ENST00000265304 WDR90Q96KV7 1748 aa17.44■□□□□ 0.38
SSBP1-201ENST00000265304 G3V3G9 751 aa17.44■□□□□ 0.38
SSBP1-201ENST00000265304 RPS12P25398 132 aaKnown RBP17.44■□□□□ 0.38
SSBP1-201ENST00000265304 TTC39AQ5SRH9 613 aa17.44■□□□□ 0.38
SSBP1-201ENST00000265304 DCAF8Q5TAQ9 597 aa17.44■□□□□ 0.38
SSBP1-201ENST00000265304 AGBL3Q8NEM8 1001 aa17.44■□□□□ 0.38
SSBP1-201ENST00000265304 L3MBTL3Q96JM7 780 aaPredicted RBP17.44■□□□□ 0.38
SSBP1-201ENST00000265304 HAUS7Q99871 368 aa17.44■□□□□ 0.38
SSBP1-201ENST00000265304 ZNF541Q9H0D2 1346 aa17.44■□□□□ 0.38
SSBP1-201ENST00000265304 GLTPD2A6NH11 291 aa17.43■□□□□ 0.38
SSBP1-201ENST00000265304 PSMD14O00487 310 aa17.43■□□□□ 0.38
SSBP1-201ENST00000265304 GLRX3O76003 335 aaKnown RBP17.43■□□□□ 0.38
SSBP1-201ENST00000265304 GTF2IP78347 998 aa17.43■□□□□ 0.38
SSBP1-201ENST00000265304 RSBN1LQ6PCB5 846 aaPredicted RBP17.43■□□□□ 0.38
SSBP1-201ENST00000265304 TMED8Q6PL24 325 aaPredicted RBP17.43■□□□□ 0.38
SSBP1-201ENST00000265304 CERS5Q8N5B7 392 aa17.43■□□□□ 0.38
SSBP1-201ENST00000265304 GPATCH3Q96I76 525 aa17.43■□□□□ 0.38
SSBP1-201ENST00000265304 ERC2O15083 957 aa17.42■□□□□ 0.38
SSBP1-201ENST00000265304 RAD17O75943 681 aa17.42■□□□□ 0.38
SSBP1-201ENST00000265304 DPY19L2Q6NUT2 758 aa17.42■□□□□ 0.38
SSBP1-201ENST00000265304 CYP2E1P05181 493 aaPredicted RBP17.41■□□□□ 0.38
SSBP1-201ENST00000265304 HDLBPQ00341 1268 aaKnown RBP17.41■□□□□ 0.38
SSBP1-201ENST00000265304 ZGPATQ8N5A5 531 aaKnown RBP17.41■□□□□ 0.38
SSBP1-201ENST00000265304 IQSEC3Q9UPP2 1182 aaPredicted RBP17.41■□□□□ 0.38
SSBP1-201ENST00000265304 MYH2Q9UKX2 1941 aa17.41■□□□□ 0.38
SSBP1-201ENST00000265304 ZAP70P43403 619 aa17.4■□□□□ 0.38
SSBP1-201ENST00000265304 ZNF280AP59817 542 aaPredicted RBP17.4■□□□□ 0.38
SSBP1-201ENST00000265304 MFSD14BQ5SR56 506 aa17.4■□□□□ 0.38
SSBP1-201ENST00000265304 PI16Q6UXB8 463 aa17.4■□□□□ 0.38
SSBP1-201ENST00000265304 AK9Q5TCS8 1911 aa17.4■□□□□ 0.38
SSBP1-201ENST00000265304 FRAT2O75474 233 aaPredicted RBP17.39■□□□□ 0.37
SSBP1-201ENST00000265304 FAM163AQ96GL9 167 aaPredicted RBP17.39■□□□□ 0.37
SSBP1-201ENST00000265304 GTF3C3Q9Y5Q9 886 aa17.39■□□□□ 0.37
SSBP1-201ENST00000265304 DDNO94850 711 aaPredicted RBP17.38■□□□□ 0.37
SSBP1-201ENST00000265304 SCNN1DP51172 638 aa17.38■□□□□ 0.37
SSBP1-201ENST00000265304 TTF1Q15361 905 aaPredicted RBP17.38■□□□□ 0.37
SSBP1-201ENST00000265304 SPTY2D1Q68D10 685 aaPredicted RBP17.38■□□□□ 0.37
SSBP1-201ENST00000265304 MTMR14Q8NCE2 650 aa17.38■□□□□ 0.37
SSBP1-201ENST00000265304 BOLA2Q9H3K6 86 aa17.38■□□□□ 0.37
SSBP1-201ENST00000265304 GPRC5DQ9NZD1 345 aa17.38■□□□□ 0.37
SSBP1-201ENST00000265304 POTECB2RU33 542 aa17.37■□□□□ 0.37
SSBP1-201ENST00000265304 GRIK5Q16478 980 aa17.37■□□□□ 0.37
SSBP1-201ENST00000265304 ZNF384Q8TF68 577 aa17.37■□□□□ 0.37
SSBP1-201ENST00000265304 ZBED3Q96IU2 234 aaPredicted RBP17.37■□□□□ 0.37
SSBP1-201ENST00000265304 SNRKQ9NRH2 765 aa17.37■□□□□ 0.37
SSBP1-201ENST00000265304 PAG1Q9NWQ8 432 aa17.37■□□□□ 0.37
SSBP1-201ENST00000265304 MAST2Q6P0Q8 1798 aa17.37■□□□□ 0.37
SSBP1-201ENST00000265304 ECM29Q5VYK3 1845 aa17.37■□□□□ 0.37
SSBP1-201ENST00000265304 USP17L8P0C7I0 530 aa17.36■□□□□ 0.37
SSBP1-201ENST00000265304 GMPSP49915 693 aaPredicted RBP17.36■□□□□ 0.37
SSBP1-201ENST00000265304 CHAF1AQ13111 956 aaPredicted RBP17.36■□□□□ 0.37
SSBP1-201ENST00000265304 HHIPL2Q6UWX4 724 aa17.36■□□□□ 0.37
SSBP1-201ENST00000265304 MXD3Q9BW11 206 aa17.36■□□□□ 0.37
SSBP1-201ENST00000265304 ANTXR1Q9H6X2 564 aa17.36■□□□□ 0.37
SSBP1-201ENST00000265304 PIH1D3Q9NQM4 214 aaKnown RBP17.36■□□□□ 0.37
SSBP1-201ENST00000265304 ZBTB12Q9Y330 459 aaPredicted RBP17.36■□□□□ 0.37
SSBP1-201ENST00000265304 POLR2AP24928 1970 aaKnown RBP17.36■□□□□ 0.37
SSBP1-201ENST00000265304 LDHBP07195 334 aaKnown RBP17.35■□□□□ 0.37
SSBP1-201ENST00000265304 PRDX5P30044 214 aa17.35■□□□□ 0.37
SSBP1-201ENST00000265304 TSHZ3Q63HK5 1081 aa17.35■□□□□ 0.37
SSBP1-201ENST00000265304 TBC1D9Q6ZT07 1266 aa17.35■□□□□ 0.37
SSBP1-201ENST00000265304 KBTBD3Q8NAB2 608 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms