RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 NR1I2O75469 434 aa12.09□□□□□ -0.47
LSG1-201ENST00000265245 CTSWP56202 376 aa12.09□□□□□ -0.47
LSG1-201ENST00000265245 CEBPZQ03701 1054 aaKnown RBP12.09□□□□□ -0.47
LSG1-201ENST00000265245 HLFQ16534 295 aa12.09□□□□□ -0.47
LSG1-201ENST00000265245 TTLL11Q8NHH1 800 aa12.09□□□□□ -0.47
LSG1-201ENST00000265245 GREM2Q9H772 168 aa12.09□□□□□ -0.47
LSG1-201ENST00000265245 TRMT112Q9UI30 125 aaKnown RBP12.09□□□□□ -0.47
LSG1-201ENST00000265245 MRVI1Q9Y6F6 885 aa12.09□□□□□ -0.47
LSG1-201ENST00000265245 FGAP02671 866 aa12.09□□□□□ -0.47
LSG1-201ENST00000265245 TPM3P06753 285 aa12.09□□□□□ -0.47
LSG1-201ENST00000265245 RIPOR2Q9Y4F9 1068 aa12.09□□□□□ -0.47
LSG1-201ENST00000265245 IRS4O14654 1257 aaPredicted RBP12.08□□□□□ -0.48
LSG1-201ENST00000265245 RBM43Q6ZSC3 357 aaKnown RBP12.08□□□□□ -0.48
LSG1-201ENST00000265245 SYTL4Q96C24 671 aaPredicted RBP12.08□□□□□ -0.48
LSG1-201ENST00000265245 SALL1Q9NSC2 1324 aa12.08□□□□□ -0.48
LSG1-201ENST00000265245 ANO6Q4KMQ2 910 aa12.08□□□□□ -0.48
LSG1-201ENST00000265245 SYNE4Q8N205 404 aa12.08□□□□□ -0.48
LSG1-201ENST00000265245 ZNF830Q96NB3 372 aaPredicted RBP12.08□□□□□ -0.48
LSG1-201ENST00000265245 TTC12Q9H892 705 aaPredicted RBP12.08□□□□□ -0.48
LSG1-201ENST00000265245 ZNF213O14771 459 aa12.08□□□□□ -0.48
LSG1-201ENST00000265245 GPAA1O43292 621 aa12.08□□□□□ -0.48
LSG1-201ENST00000265245 TOM1O60784 492 aa12.08□□□□□ -0.48
LSG1-201ENST00000265245 CYP19A1P11511 503 aaPredicted RBP12.08□□□□□ -0.48
LSG1-201ENST00000265245 EVCP57679 992 aa12.08□□□□□ -0.48
LSG1-201ENST00000265245 TTF1Q15361 905 aaPredicted RBP12.08□□□□□ -0.48
LSG1-201ENST00000265245 PI16Q6UXB8 463 aa12.08□□□□□ -0.48
LSG1-201ENST00000265245 NCOA7Q8NI08 942 aa12.08□□□□□ -0.48
LSG1-201ENST00000265245 PIBF1Q8WXW3 757 aa12.08□□□□□ -0.48
LSG1-201ENST00000265245 ZBTB9Q96C00 473 aa12.08□□□□□ -0.48
LSG1-201ENST00000265245 PUS7LQ9H0K6 701 aaKnown RBP12.08□□□□□ -0.48
LSG1-201ENST00000265245 RCOR1Q9UKL0 485 aa12.08□□□□□ -0.48
LSG1-201ENST00000265245 SHANK3Q9BYB0 1731 aa12.08□□□□□ -0.48
LSG1-201ENST00000265245 PRC1O43663 620 aa12.07□□□□□ -0.48
LSG1-201ENST00000265245 CAVIN2O95810 425 aa12.07□□□□□ -0.48
LSG1-201ENST00000265245 DNTTIP2Q5QJE6 756 aaKnown RBP12.07□□□□□ -0.48
LSG1-201ENST00000265245 CCDC73Q6ZRK6 1079 aa12.07□□□□□ -0.48
LSG1-201ENST00000265245 ZBTB1Q9Y2K1 713 aa12.07□□□□□ -0.48
LSG1-201ENST00000265245 IGSF3O75054 1194 aa12.07□□□□□ -0.48
LSG1-201ENST00000265245 TRDNQ13061 729 aa12.07□□□□□ -0.48
LSG1-201ENST00000265245 LUZP1Q86V48 1076 aa12.07□□□□□ -0.48
LSG1-201ENST00000265245 RIC1Q4ADV7 1423 aa12.07□□□□□ -0.48
LSG1-201ENST00000265245 CARMIL3Q8ND23 1372 aa12.07□□□□□ -0.48
LSG1-201ENST00000265245 EXOC5O00471 708 aa12.07□□□□□ -0.48
LSG1-201ENST00000265245 PPFIA3O75145 1194 aa12.07□□□□□ -0.48
LSG1-201ENST00000265245 MCAMP43121 646 aa12.07□□□□□ -0.48
LSG1-201ENST00000265245 TOGARAM1Q9Y4F4 1720 aa12.06□□□□□ -0.48
LSG1-201ENST00000265245 BCL9O00512 1426 aa12.06□□□□□ -0.48
LSG1-201ENST00000265245 GOLGA8BA8MQT2 603 aa12.06□□□□□ -0.48
LSG1-201ENST00000265245 CPLX1O14810 134 aa12.06□□□□□ -0.48
LSG1-201ENST00000265245 CTAGE5O15320 804 aa12.06□□□□□ -0.48
LSG1-201ENST00000265245 FOXP2O15409 715 aa12.06□□□□□ -0.48
LSG1-201ENST00000265245 PDE8AO60658 829 aa12.06□□□□□ -0.48
LSG1-201ENST00000265245 ADD1P35611 737 aaKnown RBP12.06□□□□□ -0.48
LSG1-201ENST00000265245 GUCY1B3Q02153 619 aa12.06□□□□□ -0.48
LSG1-201ENST00000265245 SLC9C2Q5TAH2 1124 aa12.06□□□□□ -0.48
LSG1-201ENST00000265245 ZNF512BQ96KM6 892 aaPredicted RBP12.06□□□□□ -0.48
LSG1-201ENST00000265245 CBX8Q9HC52 389 aa12.06□□□□□ -0.48
LSG1-201ENST00000265245 KLF18A0A0U1RQI7 1052 aa12.06□□□□□ -0.48
LSG1-201ENST00000265245 USP28Q96RU2 1077 aa12.06□□□□□ -0.48
LSG1-201ENST00000265245 TBC1D2BQ9UPU7 963 aa12.06□□□□□ -0.48
LSG1-201ENST00000265245 ERVV-1B6SEH8 477 aa12.05□□□□□ -0.48
LSG1-201ENST00000265245 IDH1O75874 414 aaKnown RBP12.05□□□□□ -0.48
LSG1-201ENST00000265245 PDE8BO95263 885 aa12.05□□□□□ -0.48
LSG1-201ENST00000265245 ZNF165P49910 485 aa12.05□□□□□ -0.48
LSG1-201ENST00000265245 DZIP3Q86Y13 1208 aaKnown RBP12.05□□□□□ -0.48
LSG1-201ENST00000265245 CCAR1Q8IX12 1150 aaKnown RBP12.05□□□□□ -0.48
LSG1-201ENST00000265245 MB21D2Q8IYB1 491 aaPredicted RBP12.05□□□□□ -0.48
LSG1-201ENST00000265245 AP5Z1O43299 807 aa12.05□□□□□ -0.48
LSG1-201ENST00000265245 KINO60870 393 aaKnown RBP12.05□□□□□ -0.48
LSG1-201ENST00000265245 ADD2P35612 726 aa12.05□□□□□ -0.48
LSG1-201ENST00000265245 IL6STP40189 918 aaPredicted RBP12.05□□□□□ -0.48
LSG1-201ENST00000265245 ME1P48163 572 aa12.05□□□□□ -0.48
LSG1-201ENST00000265245 NOLC1Q14978 699 aaKnown RBP eCLIP12.05□□□□□ -0.48
LSG1-201ENST00000265245 SPC24Q8NBT2 197 aa12.05□□□□□ -0.48
LSG1-201ENST00000265245 GPHNQ9NQX3 736 aaPredicted RBP12.05□□□□□ -0.48
LSG1-201ENST00000265245 C8orf76Q96K31 380 aa12.05□□□□□ -0.48
LSG1-201ENST00000265245 SLC4A9Q96Q91 983 aa12.05□□□□□ -0.48
LSG1-201ENST00000265245 FTOQ9C0B1 505 aaKnown RBP eCLIP12.05□□□□□ -0.48
LSG1-201ENST00000265245 WDR19Q8NEZ3 1342 aa12.05□□□□□ -0.48
LSG1-201ENST00000265245 APPP05067 770 aa12.04□□□□□ -0.48
LSG1-201ENST00000265245 UQCRFS1P1P0C7P4 283 aa12.04□□□□□ -0.48
LSG1-201ENST00000265245 UBE3CQ15386 1083 aa12.04□□□□□ -0.48
LSG1-201ENST00000265245 VGLL2Q8N8G2 317 aa12.04□□□□□ -0.48
LSG1-201ENST00000265245 DNAJC25Q9H1X3 360 aa12.04□□□□□ -0.48
LSG1-201ENST00000265245 ORC3Q9UBD5 711 aaPredicted RBP12.04□□□□□ -0.48
LSG1-201ENST00000265245 UQCRHLA0A096LP55 91 aa12.04□□□□□ -0.48
LSG1-201ENST00000265245 UQCRHP07919 91 aa12.04□□□□□ -0.48
LSG1-201ENST00000265245 FDPSP14324 419 aaKnown RBP12.04□□□□□ -0.48
LSG1-201ENST00000265245 PUM3Q15397 648 aaKnown RBP12.04□□□□□ -0.48
LSG1-201ENST00000265245 CCDC102BQ68D86 513 aa12.04□□□□□ -0.48
LSG1-201ENST00000265245 DISP2A7MBM2 1401 aa12.04□□□□□ -0.48
LSG1-201ENST00000265245 FAM160A1Q05DH4 1040 aa12.03□□□□□ -0.48
LSG1-201ENST00000265245 TDRD7Q8NHU6 1098 aaKnown RBP12.03□□□□□ -0.48
LSG1-201ENST00000265245 LPIN2Q92539 896 aa12.03□□□□□ -0.48
LSG1-201ENST00000265245 TRIM5Q9C035 493 aa12.03□□□□□ -0.48
LSG1-201ENST00000265245 SF3A1Q15459 793 aaKnown RBP12.03□□□□□ -0.48
LSG1-201ENST00000265245 DRC7Q8IY82 874 aa12.03□□□□□ -0.48
LSG1-201ENST00000265245 GOLGA6L19H0YKK7 550 aa12.03□□□□□ -0.48
LSG1-201ENST00000265245 ANTXR2P58335 489 aa12.03□□□□□ -0.48
LSG1-201ENST00000265245 FSIP1Q8NA03 581 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms