RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 CETN1Q12798 172 aa16■□□□□ 0.15
CDH3-201ENST00000264012 HSP90AA4PQ58FG1 418 aa16■□□□□ 0.15
CDH3-201ENST00000264012 AOPEPQ8N6M6 819 aa16■□□□□ 0.15
CDH3-201ENST00000264012 KBTBD3Q8NAB2 608 aa16■□□□□ 0.15
CDH3-201ENST00000264012 APPBP2Q92624 585 aa16■□□□□ 0.15
CDH3-201ENST00000264012 USP44Q9H0E7 712 aa16■□□□□ 0.15
CDH3-201ENST00000264012 TMX1Q9H3N1 280 aa16■□□□□ 0.15
CDH3-201ENST00000264012 HDAC9Q9UKV0 1011 aa16■□□□□ 0.15
CDH3-201ENST00000264012 CFAP74Q9C0B2 1584 aa15.99■□□□□ 0.15
CDH3-201ENST00000264012 DNA2P51530 1060 aa15.99■□□□□ 0.15
CDH3-201ENST00000264012 TRAF1Q13077 416 aa15.99■□□□□ 0.15
CDH3-201ENST00000264012 SNW1Q13573 536 aaKnown RBP15.99■□□□□ 0.15
CDH3-201ENST00000264012 CRACR2AQ9BSW2 395 aa15.99■□□□□ 0.15
CDH3-201ENST00000264012 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.99■□□□□ 0.15
CDH3-201ENST00000264012 FBXO3Q9UK99 471 aa15.99■□□□□ 0.15
CDH3-201ENST00000264012 DESP17661 470 aa15.99■□□□□ 0.15
CDH3-201ENST00000264012 STXBP4Q6ZWJ1 553 aa15.99■□□□□ 0.15
CDH3-201ENST00000264012 ERMNQ8TAM6 284 aa15.99■□□□□ 0.15
CDH3-201ENST00000264012 PLEKHF1Q96S99 279 aa15.99■□□□□ 0.15
CDH3-201ENST00000264012 TTC37Q6PGP7 1564 aa15.99■□□□□ 0.15
CDH3-201ENST00000264012 FAM135BQ49AJ0 1406 aa15.99■□□□□ 0.15
CDH3-201ENST00000264012 KDM5DQ9BY66 1539 aa15.99■□□□□ 0.15
CDH3-201ENST00000264012 GOLGA6L9A6NEM1 432 aa15.99■□□□□ 0.15
CDH3-201ENST00000264012 CHMP4BP1P59074 171 aa15.99■□□□□ 0.15
CDH3-201ENST00000264012 CCNL1Q9UK58 526 aaPredicted RBP15.99■□□□□ 0.15
CDH3-201ENST00000264012 CETN2P41208 172 aa15.99■□□□□ 0.15
CDH3-201ENST00000264012 TAF3Q5VWG9 929 aa15.99■□□□□ 0.15
CDH3-201ENST00000264012 DHX58Q96C10 678 aa15.99■□□□□ 0.15
CDH3-201ENST00000264012 ZKSCAN3Q9BRR0 538 aa15.99■□□□□ 0.15
CDH3-201ENST00000264012 C6orf50Q9HD87 102 aa15.99■□□□□ 0.15
CDH3-201ENST00000264012 CCDC186Q7Z3E2 898 aa15.98■□□□□ 0.15
CDH3-201ENST00000264012 CNBD1Q8NA66 436 aa15.98■□□□□ 0.15
CDH3-201ENST00000264012 TBCAO75347 108 aaKnown RBP15.98■□□□□ 0.15
CDH3-201ENST00000264012 PAFAH1B1P43034 410 aa15.98■□□□□ 0.15
CDH3-201ENST00000264012 ZNF830Q96NB3 372 aaPredicted RBP15.98■□□□□ 0.15
CDH3-201ENST00000264012 CCDC87Q9NVE4 849 aa15.98■□□□□ 0.15
CDH3-201ENST00000264012 MYOM2P54296 1465 aa15.98■□□□□ 0.15
CDH3-201ENST00000264012 MLH3Q9UHC1 1453 aa15.98■□□□□ 0.15
CDH3-201ENST00000264012 NEURL1BA8MQ27 555 aa15.98■□□□□ 0.15
CDH3-201ENST00000264012 B4E1Z4 1266 aa15.98■□□□□ 0.15
CDH3-201ENST00000264012 RIMBP2O15034 1052 aa15.98■□□□□ 0.15
CDH3-201ENST00000264012 AATKQ6ZMQ8 1374 aa15.98■□□□□ 0.15
CDH3-201ENST00000264012 NDUFB9Q9Y6M9 179 aa15.98■□□□□ 0.15
CDH3-201ENST00000264012 LIG1P18858 919 aa15.97■□□□□ 0.15
CDH3-201ENST00000264012 KRT2P35908 639 aa15.97■□□□□ 0.15
CDH3-201ENST00000264012 SPAG1Q07617 926 aa15.97■□□□□ 0.15
CDH3-201ENST00000264012 PARP3Q9Y6F1 533 aa15.97■□□□□ 0.15
CDH3-201ENST00000264012 EFCAB6Q5THR3 1501 aa15.97■□□□□ 0.15
CDH3-201ENST00000264012 ERVV-2B6SEH9 535 aa15.97■□□□□ 0.15
CDH3-201ENST00000264012 GPAA1O43292 621 aa15.97■□□□□ 0.15
CDH3-201ENST00000264012 SEPT7Q16181 437 aaKnown RBP15.97■□□□□ 0.15
CDH3-201ENST00000264012 SYCP3Q8IZU3 236 aa15.97■□□□□ 0.15
CDH3-201ENST00000264012 KDM5CP41229 1560 aa15.97■□□□□ 0.15
CDH3-201ENST00000264012 PHKG2P15735 406 aa15.97■□□□□ 0.15
CDH3-201ENST00000264012 TAX1BP1Q86VP1 789 aa15.97■□□□□ 0.15
CDH3-201ENST00000264012 SSH3Q8TE77 659 aa15.97■□□□□ 0.15
CDH3-201ENST00000264012 RRP36Q96EU6 259 aaKnown RBP15.97■□□□□ 0.15
CDH3-201ENST00000264012 SKILP12757 684 aa15.96■□□□□ 0.15
CDH3-201ENST00000264012 TRIM21P19474 475 aaKnown RBP15.96■□□□□ 0.15
CDH3-201ENST00000264012 CTAGE1Q96RT6 745 aa15.96■□□□□ 0.15
CDH3-201ENST00000264012 ARMT1Q9H993 441 aa15.96■□□□□ 0.15
CDH3-201ENST00000264012 PSMA7O14818 248 aa15.96■□□□□ 0.15
CDH3-201ENST00000264012 IBSPP21815 317 aaPredicted RBP15.96■□□□□ 0.15
CDH3-201ENST00000264012 HIBADHP31937 336 aaKnown RBP15.96■□□□□ 0.15
CDH3-201ENST00000264012 ASIC1P78348 528 aa15.96■□□□□ 0.15
CDH3-201ENST00000264012 LUZP1Q86V48 1076 aa15.96■□□□□ 0.15
CDH3-201ENST00000264012 LMOD1P29536 600 aaPredicted RBP15.96■□□□□ 0.15
CDH3-201ENST00000264012 GNG11P61952 73 aa15.96■□□□□ 0.15
CDH3-201ENST00000264012 PLEKHG1Q9ULL1 1385 aa15.96■□□□□ 0.14
CDH3-201ENST00000264012 DYNC1I1O14576 645 aa15.96■□□□□ 0.14
CDH3-201ENST00000264012 LPIN2Q92539 896 aa15.96■□□□□ 0.14
CDH3-201ENST00000264012 TMEM87BQ96K49 555 aa15.96■□□□□ 0.14
CDH3-201ENST00000264012 TAF5LO75529 589 aa15.95■□□□□ 0.14
CDH3-201ENST00000264012 WDHD1O75717 1129 aaPredicted RBP15.95■□□□□ 0.14
CDH3-201ENST00000264012 MAP9Q49MG5 647 aa15.95■□□□□ 0.14
CDH3-201ENST00000264012 EYA3Q99504 573 aa15.95■□□□□ 0.14
CDH3-201ENST00000264012 ATL3Q6DD88 541 aa15.95■□□□□ 0.14
CDH3-201ENST00000264012 TRMT2AQ8IZ69 625 aaKnown RBP15.95■□□□□ 0.14
CDH3-201ENST00000264012 ALS2CR12Q96Q35 445 aa15.95■□□□□ 0.14
CDH3-201ENST00000264012 USP8P40818 1118 aa15.95■□□□□ 0.14
CDH3-201ENST00000264012 AKR1B10O60218 316 aa15.94■□□□□ 0.14
CDH3-201ENST00000264012 TNNI2P48788 182 aa15.94■□□□□ 0.14
CDH3-201ENST00000264012 TCIRG1Q13488 830 aa15.94■□□□□ 0.14
CDH3-201ENST00000264012 FAM98CQ17RN3 349 aaKnown RBP15.94■□□□□ 0.14
CDH3-201ENST00000264012 CEP135Q66GS9 1140 aa15.94■□□□□ 0.14
CDH3-201ENST00000264012 SMARCC2Q8TAQ2 1214 aa15.94■□□□□ 0.14
CDH3-201ENST00000264012 NCOA5Q9HCD5 579 aaKnown RBP15.94■□□□□ 0.14
CDH3-201ENST00000264012 ANGEL1Q9UNK9 670 aaKnown RBP15.94■□□□□ 0.14
CDH3-201ENST00000264012 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.94■□□□□ 0.14
CDH3-201ENST00000264012 GNA11P29992 359 aa15.94■□□□□ 0.14
CDH3-201ENST00000264012 RBM17Q96I25 401 aaKnown RBP15.94■□□□□ 0.14
CDH3-201ENST00000264012 RBM28Q9NW13 759 aaKnown RBP15.94■□□□□ 0.14
CDH3-201ENST00000264012 UFL1O94874 794 aa15.93■□□□□ 0.14
CDH3-201ENST00000264012 MCM7P33993 719 aa15.93■□□□□ 0.14
CDH3-201ENST00000264012 TTC6Q86TZ1 520 aa15.93■□□□□ 0.14
CDH3-201ENST00000264012 ATP5JP18859 108 aa15.93■□□□□ 0.14
CDH3-201ENST00000264012 MCM3P25205 808 aa15.93■□□□□ 0.14
CDH3-201ENST00000264012 HSPA4P34932 840 aa15.93■□□□□ 0.14
CDH3-201ENST00000264012 TEX11Q8IYF3 940 aa15.93■□□□□ 0.14
CDH3-201ENST00000264012 LLPHQ9BRT6 129 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms