RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 NBPF4Q96M43 638 aa19.71■□□□□ 0.75
NOTCH3-201ENST00000263388 XRCC6P12956 609 aaKnown RBP eCLIP19.7■□□□□ 0.74
NOTCH3-201ENST00000263388 CFAP58Q5T655 872 aa19.7■□□□□ 0.74
NOTCH3-201ENST00000263388 CCDC50Q8IVM0 306 aa19.7■□□□□ 0.74
NOTCH3-201ENST00000263388 CCDC63Q8NA47 563 aa19.7■□□□□ 0.74
NOTCH3-201ENST00000263388 ZFYVE9O95405 1425 aa19.7■□□□□ 0.74
NOTCH3-201ENST00000263388 NPHP3Q7Z494 1330 aa19.7■□□□□ 0.74
NOTCH3-201ENST00000263388 DTHD1Q6ZMT9 781 aa19.7■□□□□ 0.74
NOTCH3-201ENST00000263388 ADGRF5Q8IZF2 1346 aa19.7■□□□□ 0.74
NOTCH3-201ENST00000263388 PSMC4P43686 418 aa19.7■□□□□ 0.74
NOTCH3-201ENST00000263388 TRMT1LQ7Z2T5 733 aaKnown RBP19.7■□□□□ 0.74
NOTCH3-201ENST00000263388 RRP36Q96EU6 259 aaKnown RBP19.7■□□□□ 0.74
NOTCH3-201ENST00000263388 ARL1P40616 181 aaPredicted RBP19.7■□□□□ 0.74
NOTCH3-201ENST00000263388 ARID5AQ03989 594 aa19.7■□□□□ 0.74
NOTCH3-201ENST00000263388 RAB11FIP4Q86YS3 637 aa19.7■□□□□ 0.74
NOTCH3-201ENST00000263388 CCDC110Q8TBZ0 833 aa19.7■□□□□ 0.74
NOTCH3-201ENST00000263388 EIF4G3O43432 1585 aaKnown RBP19.7■□□□□ 0.74
NOTCH3-201ENST00000263388 MAP3K9P80192 1104 aa19.7■□□□□ 0.74
NOTCH3-201ENST00000263388 ATP2C2O75185 946 aa19.7■□□□□ 0.74
NOTCH3-201ENST00000263388 NBPF11Q86T75 865 aa19.7■□□□□ 0.74
NOTCH3-201ENST00000263388 MEIS3Q99687 375 aa19.7■□□□□ 0.74
NOTCH3-201ENST00000263388 SAMD15Q9P1V8 674 aa19.7■□□□□ 0.74
NOTCH3-201ENST00000263388 VPS18Q9P253 973 aa19.7■□□□□ 0.74
NOTCH3-201ENST00000263388 B4DLN1 442 aa19.69■□□□□ 0.74
NOTCH3-201ENST00000263388 ALDH3A1P30838 453 aa19.69■□□□□ 0.74
NOTCH3-201ENST00000263388 MRPL12P52815 198 aaKnown RBP19.69■□□□□ 0.74
NOTCH3-201ENST00000263388 B4GALNT4Q76KP1 1039 aa19.69■□□□□ 0.74
NOTCH3-201ENST00000263388 HS2ST1Q7LGA3 356 aa19.69■□□□□ 0.74
NOTCH3-201ENST00000263388 PPIP5K1Q6PFW1 1433 aa19.69■□□□□ 0.74
NOTCH3-201ENST00000263388 FAM83GA6ND36 823 aa19.69■□□□□ 0.74
NOTCH3-201ENST00000263388 NAA16Q6N069 864 aaPredicted RBP19.69■□□□□ 0.74
NOTCH3-201ENST00000263388 FAM76AQ8TAV0 307 aa19.69■□□□□ 0.74
NOTCH3-201ENST00000263388 PLCG2P16885 1265 aa19.69■□□□□ 0.74
NOTCH3-201ENST00000263388 RUFY3Q7L099 469 aa19.69■□□□□ 0.74
NOTCH3-201ENST00000263388 MYCNP04198 464 aaPredicted RBP19.69■□□□□ 0.74
NOTCH3-201ENST00000263388 RBM28Q9NW13 759 aaKnown RBP19.69■□□□□ 0.74
NOTCH3-201ENST00000263388 SETSIPP0DME0 302 aa19.69■□□□□ 0.74
NOTCH3-201ENST00000263388 TNNC1P63316 161 aa19.69■□□□□ 0.74
NOTCH3-201ENST00000263388 LRRC2Q9BYS8 371 aa19.69■□□□□ 0.74
NOTCH3-201ENST00000263388 A6NNZ2 444 aa19.69■□□□□ 0.74
NOTCH3-201ENST00000263388 TUBB8Q3ZCM7 444 aa19.69■□□□□ 0.74
NOTCH3-201ENST00000263388 EEF2P13639 858 aaKnown RBP19.69■□□□□ 0.74
NOTCH3-201ENST00000263388 APBB1IPQ7Z5R6 666 aaPredicted RBP19.68■□□□□ 0.74
NOTCH3-201ENST00000263388 MTUS1Q9ULD2 1270 aa19.68■□□□□ 0.74
NOTCH3-201ENST00000263388 ELP1O95163 1332 aa19.68■□□□□ 0.74
NOTCH3-201ENST00000263388 PPP1R2P41236 205 aa19.68■□□□□ 0.74
NOTCH3-201ENST00000263388 GUCA1BQ9UMX6 200 aa19.68■□□□□ 0.74
NOTCH3-201ENST00000263388 ALDH1L1O75891 902 aa19.68■□□□□ 0.74
NOTCH3-201ENST00000263388 FAM13AO94988 1023 aa19.68■□□□□ 0.74
NOTCH3-201ENST00000263388 LUC7L2Q9Y383 392 aaKnown RBP19.68■□□□□ 0.74
NOTCH3-201ENST00000263388 ZNF804AQ7Z570 1209 aa19.68■□□□□ 0.74
NOTCH3-201ENST00000263388 TRIM7Q9C029 511 aa19.68■□□□□ 0.74
NOTCH3-201ENST00000263388 SELENOSQ9BQE4 189 aa19.68■□□□□ 0.74
NOTCH3-201ENST00000263388 MICALL1Q8N3F8 863 aa19.68■□□□□ 0.74
NOTCH3-201ENST00000263388 DHX58Q96C10 678 aa19.68■□□□□ 0.74
NOTCH3-201ENST00000263388 ZEB2O60315 1214 aa19.67■□□□□ 0.74
NOTCH3-201ENST00000263388 PPP1R7Q15435 360 aa19.67■□□□□ 0.74
NOTCH3-201ENST00000263388 CCDC26Q8TAB7 109 aa19.67■□□□□ 0.74
NOTCH3-201ENST00000263388 FRMD4BQ9Y2L6 1034 aa19.67■□□□□ 0.74
NOTCH3-201ENST00000263388 ATP6V0A2Q9Y487 856 aa19.67■□□□□ 0.74
NOTCH3-201ENST00000263388 MAGEB6P1A0A0J9YX57 407 aa19.67■□□□□ 0.74
NOTCH3-201ENST00000263388 TUBB2AQ13885 445 aa19.67■□□□□ 0.74
NOTCH3-201ENST00000263388 SETDB1Q15047 1291 aa19.67■□□□□ 0.74
NOTCH3-201ENST00000263388 CAPZA3Q96KX2 299 aa19.67■□□□□ 0.74
NOTCH3-201ENST00000263388 SETDB2Q96T68 719 aa19.67■□□□□ 0.74
NOTCH3-201ENST00000263388 TUBB2BQ9BVA1 445 aa19.67■□□□□ 0.74
NOTCH3-201ENST00000263388 TPD52P55327 224 aaPredicted RBP19.67■□□□□ 0.74
NOTCH3-201ENST00000263388 HMGB1P1B2RPK0 211 aaPredicted RBP19.67■□□□□ 0.74
NOTCH3-201ENST00000263388 GAS8O95995 478 aa19.67■□□□□ 0.74
NOTCH3-201ENST00000263388 GMNNO75496 209 aa19.67■□□□□ 0.74
NOTCH3-201ENST00000263388 MAK16Q9BXY0 300 aaKnown RBP19.67■□□□□ 0.74
NOTCH3-201ENST00000263388 PCDHB15Q9Y5E8 787 aa19.67■□□□□ 0.74
NOTCH3-201ENST00000263388 SLC9C2Q5TAH2 1124 aa19.66■□□□□ 0.74
NOTCH3-201ENST00000263388 SMC1BQ8NDV3 1235 aa19.66■□□□□ 0.74
NOTCH3-201ENST00000263388 TRIM14Q14142 442 aa19.66■□□□□ 0.74
NOTCH3-201ENST00000263388 IQUBQ8NA54 791 aa19.66■□□□□ 0.74
NOTCH3-201ENST00000263388 C14orf93Q9H972 538 aaKnown RBP19.66■□□□□ 0.74
NOTCH3-201ENST00000263388 SMC5Q8IY18 1101 aa19.66■□□□□ 0.74
NOTCH3-201ENST00000263388 NYXQ9GZU5 481 aa19.66■□□□□ 0.74
NOTCH3-201ENST00000263388 ZMYM4Q5VZL5 1548 aa19.66■□□□□ 0.74
NOTCH3-201ENST00000263388 ATP8B2P98198 1209 aa19.66■□□□□ 0.74
NOTCH3-201ENST00000263388 GPR161Q8N6U8 529 aaKnown RBP19.66■□□□□ 0.74
NOTCH3-201ENST00000263388 KRT79Q5XKE5 535 aa19.66■□□□□ 0.74
NOTCH3-201ENST00000263388 CEP57Q86XR8 500 aa19.66■□□□□ 0.74
NOTCH3-201ENST00000263388 ZNF354CQ86Y25 554 aa19.66■□□□□ 0.74
NOTCH3-201ENST00000263388 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.66■□□□□ 0.74
NOTCH3-201ENST00000263388 SYCP2Q9BX26 1530 aa19.66■□□□□ 0.74
NOTCH3-201ENST00000263388 RPL13P26373 211 aaKnown RBP19.66■□□□□ 0.74
NOTCH3-201ENST00000263388 OGFOD1Q8N543 542 aa19.66■□□□□ 0.74
NOTCH3-201ENST00000263388 IFNKQ9P0W0 207 aa19.66■□□□□ 0.74
NOTCH3-201ENST00000263388 DENND4BO75064 1496 aaPredicted RBP19.66■□□□□ 0.74
NOTCH3-201ENST00000263388 PPFIA3O75145 1194 aa19.65■□□□□ 0.74
NOTCH3-201ENST00000263388 CSRNP2Q9H175 543 aa19.65■□□□□ 0.74
NOTCH3-201ENST00000263388 LZTFL1Q9NQ48 299 aa19.65■□□□□ 0.74
NOTCH3-201ENST00000263388 DNAJC21Q5F1R6 531 aaKnown RBP19.65■□□□□ 0.74
NOTCH3-201ENST00000263388 ZNF569Q5MCW4 686 aa19.65■□□□□ 0.74
NOTCH3-201ENST00000263388 KSR2Q6VAB6 950 aa19.65■□□□□ 0.74
NOTCH3-201ENST00000263388 CCDC114Q96M63 670 aa19.65■□□□□ 0.74
NOTCH3-201ENST00000263388 TMEM110-MUSTN1A8MSY1 372 aa19.65■□□□□ 0.74
NOTCH3-201ENST00000263388 AKR1B15C9JRZ8 316 aaPredicted RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms