RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 CHAF1AQ13111 956 aaPredicted RBP33.4■■■□□ 2.94
SMARCD3-201ENST00000262188 SOGA3Q5TF21 947 aa33.4■■■□□ 2.94
SMARCD3-201ENST00000262188 EYA3Q99504 573 aa33.4■■■□□ 2.94
SMARCD3-201ENST00000262188 CHGBP05060 677 aa33.4■■■□□ 2.94
SMARCD3-201ENST00000262188 IPO9Q96P70 1041 aaKnown RBP33.4■■■□□ 2.94
SMARCD3-201ENST00000262188 PSMD1Q99460 953 aa33.4■■■□□ 2.94
SMARCD3-201ENST00000262188 GNL3LQ9NVN8 582 aaKnown RBP33.4■■■□□ 2.94
SMARCD3-201ENST00000262188 PAG1Q9NWQ8 432 aa33.4■■■□□ 2.94
SMARCD3-201ENST00000262188 FER1L6Q2WGJ9 1857 aa33.39■■■□□ 2.94
SMARCD3-201ENST00000262188 ARFGEF1Q9Y6D6 1849 aa33.39■■■□□ 2.94
SMARCD3-201ENST00000262188 PPIP5K2O43314 1243 aa33.39■■■□□ 2.94
SMARCD3-201ENST00000262188 CYP2E1P05181 493 aaPredicted RBP33.39■■■□□ 2.94
SMARCD3-201ENST00000262188 PPIL4Q8WUA2 492 aaKnown RBP eCLIP33.39■■■□□ 2.94
SMARCD3-201ENST00000262188 KCNQ5Q9NR82 932 aa33.38■■■□□ 2.93
SMARCD3-201ENST00000262188 CHD4Q14839 1912 aa33.38■■■□□ 2.93
SMARCD3-201ENST00000262188 COL4A5P29400 1685 aa33.38■■■□□ 2.93
SMARCD3-201ENST00000262188 TDRD7Q8NHU6 1098 aaKnown RBP33.38■■■□□ 2.93
SMARCD3-201ENST00000262188 TAOK3Q9H2K8 898 aa33.37■■■□□ 2.93
SMARCD3-201ENST00000262188 PIH1D3Q9NQM4 214 aaKnown RBP33.37■■■□□ 2.93
SMARCD3-201ENST00000262188 PRELPP51888 382 aa33.36■■■□□ 2.93
SMARCD3-201ENST00000262188 KIAA2012Q0VF49 1180 aa33.36■■■□□ 2.93
SMARCD3-201ENST00000262188 SLFNL1Q499Z3 407 aa33.36■■■□□ 2.93
SMARCD3-201ENST00000262188 CNTROBQ8N137 903 aa33.36■■■□□ 2.93
SMARCD3-201ENST00000262188 SUPT20HQ8NEM7 779 aa33.36■■■□□ 2.93
SMARCD3-201ENST00000262188 G3V3G9 751 aa33.35■■■□□ 2.93
SMARCD3-201ENST00000262188 DCAF8Q5TAQ9 597 aa33.35■■■□□ 2.93
SMARCD3-201ENST00000262188 MYO5AQ9Y4I1 1855 aaKnown RBP33.35■■■□□ 2.93
SMARCD3-201ENST00000262188 IL1R1P14778 569 aa33.34■■■□□ 2.93
SMARCD3-201ENST00000262188 GRIPAP1Q4V328 841 aa33.34■■■□□ 2.93
SMARCD3-201ENST00000262188 MYH13Q9UKX3 1938 aa33.34■■■□□ 2.93
SMARCD3-201ENST00000262188 AK9Q5TCS8 1911 aa33.34■■■□□ 2.93
SMARCD3-201ENST00000262188 ANP32AP39687 249 aaKnown RBP33.34■■■□□ 2.93
SMARCD3-201ENST00000262188 ARHGAP27Q6ZUM4 889 aa33.34■■■□□ 2.93
SMARCD3-201ENST00000262188 EVI5LQ96CN4 794 aa33.34■■■□□ 2.93
SMARCD3-201ENST00000262188 COA1Q9GZY4 146 aa33.34■■■□□ 2.93
SMARCD3-201ENST00000262188 FSD1Q9BTV5 496 aa33.33■■■□□ 2.93
SMARCD3-201ENST00000262188 DENND2AQ9ULE3 1009 aa33.33■■■□□ 2.93
SMARCD3-201ENST00000262188 ECE2O60344 883 aa33.32■■■□□ 2.93
SMARCD3-201ENST00000262188 LARGE2Q8N3Y3 721 aa33.32■■■□□ 2.93
SMARCD3-201ENST00000262188 FBXW7Q969H0 707 aa33.32■■■□□ 2.93
SMARCD3-201ENST00000262188 IARSP41252 1262 aaKnown RBP33.3■■■□□ 2.92
SMARCD3-201ENST00000262188 C8orf34Q49A92 452 aa33.3■■■□□ 2.92
SMARCD3-201ENST00000262188 MXD3Q9BW11 206 aa33.3■■■□□ 2.92
SMARCD3-201ENST00000262188 ABCF2Q9UG63 623 aa33.3■■■□□ 2.92
SMARCD3-201ENST00000262188 GTF2IP78347 998 aa33.3■■■□□ 2.92
SMARCD3-201ENST00000262188 YDJCA8MPS7 323 aa33.29■■■□□ 2.92
SMARCD3-201ENST00000262188 GRIK5Q16478 980 aa33.29■■■□□ 2.92
SMARCD3-201ENST00000262188 KBTBD3Q8NAB2 608 aa33.29■■■□□ 2.92
SMARCD3-201ENST00000262188 SCN9AQ15858 1988 aa33.29■■■□□ 2.92
SMARCD3-201ENST00000262188 SEMA3EO15041 775 aa33.29■■■□□ 2.92
SMARCD3-201ENST00000262188 IDH1O75874 414 aaKnown RBP33.29■■■□□ 2.92
SMARCD3-201ENST00000262188 CDC45O75419 566 aa33.26■■■□□ 2.91
SMARCD3-201ENST00000262188 CHMLP26374 656 aa33.25■■■□□ 2.91
SMARCD3-201ENST00000262188 RTN4Q9NQC3 1192 aaKnown RBP33.25■■■□□ 2.91
SMARCD3-201ENST00000262188 PRDX5P30044 214 aa33.25■■■□□ 2.91
SMARCD3-201ENST00000262188 GPR162Q16538 588 aa33.25■■■□□ 2.91
SMARCD3-201ENST00000262188 IL25Q9H293 177 aa33.25■■■□□ 2.91
SMARCD3-201ENST00000262188 PODNQ7Z5L7 613 aa33.24■■■□□ 2.91
SMARCD3-201ENST00000262188 FAM227BQ96M60 508 aa33.24■■■□□ 2.91
SMARCD3-201ENST00000262188 LRP2BPQ9P2M1 347 aa33.24■■■□□ 2.91
SMARCD3-201ENST00000262188 LTBP3Q9NS15 1303 aa33.23■■■□□ 2.91
SMARCD3-201ENST00000262188 TTLL5Q6EMB2 1281 aa33.23■■■□□ 2.91
SMARCD3-201ENST00000262188 CCDC88AQ3V6T2 1871 aa33.23■■■□□ 2.91
SMARCD3-201ENST00000262188 RAD17O75943 681 aa33.22■■■□□ 2.91
SMARCD3-201ENST00000262188 TTF1Q15361 905 aaPredicted RBP33.22■■■□□ 2.91
SMARCD3-201ENST00000262188 NIM1KQ8IY84 436 aa33.22■■■□□ 2.91
SMARCD3-201ENST00000262188 PDS5AQ29RF7 1337 aaKnown RBP33.22■■■□□ 2.91
SMARCD3-201ENST00000262188 MFSD14BQ5SR56 506 aa33.21■■■□□ 2.91
SMARCD3-201ENST00000262188 CWC27Q6UX04 472 aaKnown RBP33.21■■■□□ 2.91
SMARCD3-201ENST00000262188 CERS5Q8N5B7 392 aa33.21■■■□□ 2.91
SMARCD3-201ENST00000262188 RAI14Q9P0K7 980 aa33.21■■■□□ 2.91
SMARCD3-201ENST00000262188 SEC24BO95487 1268 aa33.21■■■□□ 2.91
SMARCD3-201ENST00000262188 NMIQ13287 307 aaPredicted RBP33.21■■■□□ 2.91
SMARCD3-201ENST00000262188 SEC62Q99442 399 aaKnown RBP33.21■■■□□ 2.91
SMARCD3-201ENST00000262188 DOCK2Q92608 1830 aa33.2■■■□□ 2.91
SMARCD3-201ENST00000262188 FAM205AQ6ZU69 1335 aa33.2■■■□□ 2.91
SMARCD3-201ENST00000262188 SLC9C2Q5TAH2 1124 aa33.2■■■□□ 2.91
SMARCD3-201ENST00000262188 WDR66Q8TBY9 1149 aa33.2■■■□□ 2.91
SMARCD3-201ENST00000262188 ZNF384Q8TF68 577 aa33.2■■■□□ 2.91
SMARCD3-201ENST00000262188 A0A0D9SFI3 127 aa33.2■■■□□ 2.9
SMARCD3-201ENST00000262188 DIAPH3Q9NSV4 1193 aa33.2■■■□□ 2.9
SMARCD3-201ENST00000262188 MAGEB6Q8N7X4 407 aa33.19■■■□□ 2.9
SMARCD3-201ENST00000262188 VPS33BQ9H267 617 aa33.18■■■□□ 2.9
SMARCD3-201ENST00000262188 F8W031 263 aaPredicted RBP33.18■■■□□ 2.9
SMARCD3-201ENST00000262188 PDE6AP16499 860 aa33.18■■■□□ 2.9
SMARCD3-201ENST00000262188 ZNRF3Q9ULT6 936 aa33.18■■■□□ 2.9
SMARCD3-201ENST00000262188 ZNF646O15015 1829 aaPredicted RBP33.17■■■□□ 2.9
SMARCD3-201ENST00000262188 RNF113AO15541 343 aaKnown RBP33.17■■■□□ 2.9
SMARCD3-201ENST00000262188 JDP2Q8WYK2 163 aa33.17■■■□□ 2.9
SMARCD3-201ENST00000262188 MYH7P12883 1935 aa33.16■■■□□ 2.9
SMARCD3-201ENST00000262188 USP17L3A6NCW0 530 aa33.16■■■□□ 2.9
SMARCD3-201ENST00000262188 USP17L4A6NCW7 530 aa33.16■■■□□ 2.9
SMARCD3-201ENST00000262188 ZBTB22O15209 634 aa33.16■■■□□ 2.9
SMARCD3-201ENST00000262188 MAP3K12Q12852 859 aa33.16■■■□□ 2.9
SMARCD3-201ENST00000262188 DACT2Q5SW24 774 aa33.16■■■□□ 2.9
SMARCD3-201ENST00000262188 USP17L1Q7RTZ2 530 aa33.16■■■□□ 2.9
SMARCD3-201ENST00000262188 ZNF532Q9HCE3 1301 aa33.16■■■□□ 2.9
SMARCD3-201ENST00000262188 SALL1Q9NSC2 1324 aa33.16■■■□□ 2.9
SMARCD3-201ENST00000262188 ADD2P35612 726 aa33.16■■■□□ 2.9
SMARCD3-201ENST00000262188 MECOMQ03112 1051 aa33.16■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms