RNA–Protein interactions for RNA: ENST00000262059.8

CALCOCO1-201, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CALCOCO1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-201ENST00000262059 ALDH3A1P30838 453 aa12.15□□□□□ -0.46
CALCOCO1-201ENST00000262059 CATIPQ7Z7H3 387 aa12.15□□□□□ -0.46
CALCOCO1-201ENST00000262059 N4BP2L2Q92802 583 aaPredicted RBP12.15□□□□□ -0.46
CALCOCO1-201ENST00000262059 CCDC61Q9Y6R9 512 aa12.15□□□□□ -0.46
CALCOCO1-201ENST00000262059 RNASE9P60153 205 aaKnown RBP12.15□□□□□ -0.46
CALCOCO1-201ENST00000262059 TNNC1P63316 161 aa12.15□□□□□ -0.46
CALCOCO1-201ENST00000262059 CETN1Q12798 172 aa12.15□□□□□ -0.46
CALCOCO1-201ENST00000262059 PPP1R7Q15435 360 aa12.15□□□□□ -0.46
CALCOCO1-201ENST00000262059 BRF1Q92994 677 aa12.15□□□□□ -0.46
CALCOCO1-201ENST00000262059 MCUR1Q96AQ8 359 aa12.15□□□□□ -0.46
CALCOCO1-201ENST00000262059 CBX8Q9HC52 389 aa12.15□□□□□ -0.46
CALCOCO1-201ENST00000262059 TMOD3Q9NYL9 352 aa12.15□□□□□ -0.46
CALCOCO1-201ENST00000262059 COG7P83436 770 aa12.14□□□□□ -0.47
CALCOCO1-201ENST00000262059 SH2D4BQ5SQS7 431 aa12.14□□□□□ -0.47
CALCOCO1-201ENST00000262059 SLF2Q8IX21 1173 aa12.14□□□□□ -0.47
CALCOCO1-201ENST00000262059 DDX12PQ92771 950 aa12.14□□□□□ -0.47
CALCOCO1-201ENST00000262059 NKIRAS1Q9NYS0 192 aa12.14□□□□□ -0.47
CALCOCO1-201ENST00000262059 PTPRCP08575 1304 aa12.14□□□□□ -0.47
CALCOCO1-201ENST00000262059 A6NNZ2 444 aa12.14□□□□□ -0.47
CALCOCO1-201ENST00000262059 AKR1B15C9JRZ8 316 aaPredicted RBP12.14□□□□□ -0.47
CALCOCO1-201ENST00000262059 IFIT3O14879 490 aaKnown RBP12.14□□□□□ -0.47
CALCOCO1-201ENST00000262059 IARSP41252 1262 aaKnown RBP12.14□□□□□ -0.47
CALCOCO1-201ENST00000262059 TUBB8Q3ZCM7 444 aa12.14□□□□□ -0.47
CALCOCO1-201ENST00000262059 C8orf74Q6P047 294 aa12.14□□□□□ -0.47
CALCOCO1-201ENST00000262059 RGS22Q8NE09 1264 aa12.14□□□□□ -0.47
CALCOCO1-201ENST00000262059 CALML4Q96GE6 196 aa12.14□□□□□ -0.47
CALCOCO1-201ENST00000262059 SLC8A1P32418 973 aa12.14□□□□□ -0.47
CALCOCO1-201ENST00000262059 CCT5P48643 541 aa12.14□□□□□ -0.47
CALCOCO1-201ENST00000262059 MAP7Q14244 749 aa12.14□□□□□ -0.47
CALCOCO1-201ENST00000262059 TSPYL2Q9H2G4 693 aaPredicted RBP12.14□□□□□ -0.47
CALCOCO1-201ENST00000262059 ABCC5O15440 1437 aa12.14□□□□□ -0.47
CALCOCO1-201ENST00000262059 SND1Q7KZF4 910 aaKnown RBP eCLIP12.14□□□□□ -0.47
CALCOCO1-201ENST00000262059 GSDMBQ8TAX9 411 aa12.14□□□□□ -0.47
CALCOCO1-201ENST00000262059 TSNARE1Q96NA8 513 aa12.14□□□□□ -0.47
CALCOCO1-201ENST00000262059 SPAG5Q96R06 1193 aa12.14□□□□□ -0.47
CALCOCO1-201ENST00000262059 DDX21Q9NR30 783 aaKnown RBP eCLIP12.14□□□□□ -0.47
CALCOCO1-201ENST00000262059 ODF2LQ9ULJ1 636 aa12.14□□□□□ -0.47
CALCOCO1-201ENST00000262059 NESP48681 1621 aa12.14□□□□□ -0.47
CALCOCO1-201ENST00000262059 GIGYF1O75420 1035 aaPredicted RBP12.14□□□□□ -0.47
CALCOCO1-201ENST00000262059 HDAC1Q13547 482 aaPredicted RBP12.14□□□□□ -0.47
CALCOCO1-201ENST00000262059 TTLL12Q14166 644 aaPredicted RBP12.14□□□□□ -0.47
CALCOCO1-201ENST00000262059 LONRF3Q496Y0 759 aa12.14□□□□□ -0.47
CALCOCO1-201ENST00000262059 TTC19Q6DKK2 380 aaPredicted RBP12.14□□□□□ -0.47
CALCOCO1-201ENST00000262059 BCAS4Q8TDM0 211 aa12.14□□□□□ -0.47
CALCOCO1-201ENST00000262059 MAP7D1Q3KQU3 841 aa12.13□□□□□ -0.47
CALCOCO1-201ENST00000262059 MICU3Q86XE3 530 aa12.13□□□□□ -0.47
CALCOCO1-201ENST00000262059 ABTB1Q969K4 478 aaPredicted RBP12.13□□□□□ -0.47
CALCOCO1-201ENST00000262059 PSMD1Q99460 953 aa12.13□□□□□ -0.47
CALCOCO1-201ENST00000262059 EXOC1Q9NV70 894 aa12.13□□□□□ -0.47
CALCOCO1-201ENST00000262059 LOC102724159A0A0B4J2E5 919 aa12.13□□□□□ -0.47
CALCOCO1-201ENST00000262059 SPAG1Q07617 926 aa12.13□□□□□ -0.47
CALCOCO1-201ENST00000262059 PWP2Q15269 919 aaKnown RBP12.13□□□□□ -0.47
CALCOCO1-201ENST00000262059 GSTA5Q7RTV2 222 aa12.13□□□□□ -0.47
CALCOCO1-201ENST00000262059 PIK3R5Q8WYR1 880 aa12.13□□□□□ -0.47
CALCOCO1-201ENST00000262059 ESYT1Q9BSJ8 1104 aa12.13□□□□□ -0.47
CALCOCO1-201ENST00000262059 SLC26A6Q9BXS9 759 aa12.13□□□□□ -0.47
CALCOCO1-201ENST00000262059 HAND2P61296 217 aa12.13□□□□□ -0.47
CALCOCO1-201ENST00000262059 PPFIA1Q13136 1202 aa12.13□□□□□ -0.47
CALCOCO1-201ENST00000262059 LRRD1A4D1F6 860 aa12.13□□□□□ -0.47
CALCOCO1-201ENST00000262059 ZPR1O75312 459 aa12.13□□□□□ -0.47
CALCOCO1-201ENST00000262059 TTF1Q15361 905 aaPredicted RBP12.13□□□□□ -0.47
CALCOCO1-201ENST00000262059 CCDC174Q6PII3 467 aa12.13□□□□□ -0.47
CALCOCO1-201ENST00000262059 RMND1Q9NWS8 449 aa12.13□□□□□ -0.47
CALCOCO1-201ENST00000262059 MTRF1LQ9UGC7 380 aaKnown RBP12.13□□□□□ -0.47
CALCOCO1-201ENST00000262059 GADD45BO75293 160 aaPredicted RBP12.13□□□□□ -0.47
CALCOCO1-201ENST00000262059 ATP1A2P50993 1020 aa12.13□□□□□ -0.47
CALCOCO1-201ENST00000262059 BIRC2Q13490 618 aa12.13□□□□□ -0.47
CALCOCO1-201ENST00000262059 RASIP1Q5U651 963 aa12.13□□□□□ -0.47
CALCOCO1-201ENST00000262059 CLTAP09496 248 aa12.12□□□□□ -0.47
CALCOCO1-201ENST00000262059 HNRNPH2P55795 449 aaKnown RBP12.12□□□□□ -0.47
CALCOCO1-201ENST00000262059 STXBP4Q6ZWJ1 553 aa12.12□□□□□ -0.47
CALCOCO1-201ENST00000262059 CNPY4Q8N129 248 aa12.12□□□□□ -0.47
CALCOCO1-201ENST00000262059 GPR161Q8N6U8 529 aaKnown RBP12.12□□□□□ -0.47
CALCOCO1-201ENST00000262059 STAG1Q8WVM7 1258 aa12.12□□□□□ -0.47
CALCOCO1-201ENST00000262059 LRRC27Q9C0I9 530 aa12.12□□□□□ -0.47
CALCOCO1-201ENST00000262059 TCP11L1Q9NUJ3 509 aa12.12□□□□□ -0.47
CALCOCO1-201ENST00000262059 OPHN1O60890 802 aa12.12□□□□□ -0.47
CALCOCO1-201ENST00000262059 SEC31AO94979 1220 aaKnown RBP12.12□□□□□ -0.47
CALCOCO1-201ENST00000262059 LRRC23Q53EV4 343 aaPredicted RBP12.12□□□□□ -0.47
CALCOCO1-201ENST00000262059 ANKIB1Q9P2G1 1089 aa12.12□□□□□ -0.47
CALCOCO1-201ENST00000262059 CCDC141Q6ZP82 1450 aa12.12□□□□□ -0.47
CALCOCO1-201ENST00000262059 ZWINTO95229 277 aa12.12□□□□□ -0.47
CALCOCO1-201ENST00000262059 SESN3P58005 492 aa12.12□□□□□ -0.47
CALCOCO1-201ENST00000262059 TTC16Q8NEE8 873 aa12.12□□□□□ -0.47
CALCOCO1-201ENST00000262059 DHX58Q96C10 678 aa12.12□□□□□ -0.47
CALCOCO1-201ENST00000262059 METAP2P50579 478 aaKnown RBP eCLIP12.12□□□□□ -0.47
CALCOCO1-201ENST00000262059 WHAMMQ8TF30 809 aa12.12□□□□□ -0.47
CALCOCO1-201ENST00000262059 FERMT2Q96AC1 680 aa12.12□□□□□ -0.47
CALCOCO1-201ENST00000262059 GJC1P36383 396 aa12.11□□□□□ -0.47
CALCOCO1-201ENST00000262059 UBA7P41226 1012 aa12.11□□□□□ -0.47
CALCOCO1-201ENST00000262059 AK2P54819 239 aa12.11□□□□□ -0.47
CALCOCO1-201ENST00000262059 ICE2Q659A1 982 aa12.11□□□□□ -0.47
CALCOCO1-201ENST00000262059 EFCAB13Q8IY85 973 aa12.11□□□□□ -0.47
CALCOCO1-201ENST00000262059 NPHP3Q7Z494 1330 aa12.11□□□□□ -0.47
CALCOCO1-201ENST00000262059 SPTLC2O15270 562 aa12.11□□□□□ -0.47
CALCOCO1-201ENST00000262059 GRM1Q13255 1194 aa12.11□□□□□ -0.47
CALCOCO1-201ENST00000262059 CCDC110Q8TBZ0 833 aa12.11□□□□□ -0.47
CALCOCO1-201ENST00000262059 SREK1Q8WXA9 508 aaKnown RBP12.11□□□□□ -0.47
CALCOCO1-201ENST00000262059 CAPS2Q9BXY5 557 aa12.11□□□□□ -0.47
CALCOCO1-201ENST00000262059 PDE11AQ9HCR9 933 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms