RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 TTC39AQ5SRH9 613 aa22.55■■□□□ 1.2
COL4A3BP-201ENST00000261415 KIAA1551Q9HCM1 1747 aa22.55■■□□□ 1.2
COL4A3BP-201ENST00000261415 C2CD5Q86YS7 1000 aa22.55■■□□□ 1.2
COL4A3BP-201ENST00000261415 HAUS7Q99871 368 aa22.55■■□□□ 1.2
COL4A3BP-201ENST00000261415 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.54■■□□□ 1.2
COL4A3BP-201ENST00000261415 PSDA5PKW4 1024 aaPredicted RBP22.54■■□□□ 1.2
COL4A3BP-201ENST00000261415 WTIPA6NIX2 430 aaPredicted RBP22.54■■□□□ 1.2
COL4A3BP-201ENST00000261415 EVI5LQ96CN4 794 aa22.54■■□□□ 1.2
COL4A3BP-201ENST00000261415 CCDC39Q9UFE4 941 aa22.54■■□□□ 1.2
COL4A3BP-201ENST00000261415 ATF5Q9Y2D1 282 aaPredicted RBP22.54■■□□□ 1.2
COL4A3BP-201ENST00000261415 NDUFB9Q9Y6M9 179 aa22.54■■□□□ 1.2
COL4A3BP-201ENST00000261415 H0YIN7 160 aa22.53■■□□□ 1.2
COL4A3BP-201ENST00000261415 ALDH1B1P30837 517 aa22.53■■□□□ 1.2
COL4A3BP-201ENST00000261415 CCDC102BQ68D86 513 aa22.53■■□□□ 1.2
COL4A3BP-201ENST00000261415 CLEC17AQ6ZS10 378 aa22.53■■□□□ 1.2
COL4A3BP-201ENST00000261415 DNAJC2Q99543 621 aaKnown RBP22.53■■□□□ 1.2
COL4A3BP-201ENST00000261415 DOCK2Q92608 1830 aa22.53■■□□□ 1.2
COL4A3BP-201ENST00000261415 PPEF1O14829 653 aaPredicted RBP22.52■■□□□ 1.2
COL4A3BP-201ENST00000261415 PHKA1P46020 1223 aa22.52■■□□□ 1.2
COL4A3BP-201ENST00000261415 HMGN5P82970 282 aaKnown RBP22.52■■□□□ 1.2
COL4A3BP-201ENST00000261415 TMC4Q7Z404 712 aa22.52■■□□□ 1.2
COL4A3BP-201ENST00000261415 PRIMPOLQ96LW4 560 aa22.52■■□□□ 1.2
COL4A3BP-201ENST00000261415 KCNJ4P48050 445 aa22.52■■□□□ 1.2
COL4A3BP-201ENST00000261415 EDC3Q96F86 508 aaKnown RBP22.52■■□□□ 1.2
COL4A3BP-201ENST00000261415 ZNF512BQ96KM6 892 aaPredicted RBP22.52■■□□□ 1.2
COL4A3BP-201ENST00000261415 ANKIB1Q9P2G1 1089 aa22.52■■□□□ 1.2
COL4A3BP-201ENST00000261415 XDHP47989 1333 aa22.52■■□□□ 1.19
COL4A3BP-201ENST00000261415 CASC1Q6TDU7 716 aa22.51■■□□□ 1.19
COL4A3BP-201ENST00000261415 ZNF622Q969S3 477 aaKnown RBP eCLIP22.51■■□□□ 1.191e-6■■□□□ 14
COL4A3BP-201ENST00000261415 BRCA1P38398 1863 aaKnown RBP22.51■■□□□ 1.19
COL4A3BP-201ENST00000261415 CHRNA5P30532 468 aa22.51■■□□□ 1.19
COL4A3BP-201ENST00000261415 CBX1P83916 185 aa22.51■■□□□ 1.19
COL4A3BP-201ENST00000261415 SCARF1Q14162 830 aa22.51■■□□□ 1.19
COL4A3BP-201ENST00000261415 STYK1Q6J9G0 422 aa22.51■■□□□ 1.19
COL4A3BP-201ENST00000261415 ZNF804BA4D1E1 1349 aa22.5■■□□□ 1.19
COL4A3BP-201ENST00000261415 POLD1P28340 1107 aa22.5■■□□□ 1.19
COL4A3BP-201ENST00000261415 ARID4AP29374 1257 aaPredicted RBP22.5■■□□□ 1.19
COL4A3BP-201ENST00000261415 DDX49Q9Y6V7 483 aaKnown RBP22.5■■□□□ 1.19
COL4A3BP-201ENST00000261415 CHMLP26374 656 aa22.5■■□□□ 1.19
COL4A3BP-201ENST00000261415 CDK11BP21127 795 aaKnown RBP22.49■■□□□ 1.19
COL4A3BP-201ENST00000261415 GTF2F1P35269 517 aaKnown RBP eCLIP22.49■■□□□ 1.19
COL4A3BP-201ENST00000261415 MCAMP43121 646 aa22.49■■□□□ 1.19
COL4A3BP-201ENST00000261415 MFAP1P55081 439 aaKnown RBP22.49■■□□□ 1.19
COL4A3BP-201ENST00000261415 GPSM2P81274 684 aa22.49■■□□□ 1.19
COL4A3BP-201ENST00000261415 SP8Q8IXZ3 490 aa22.49■■□□□ 1.19
COL4A3BP-201ENST00000261415 PAG1Q9NWQ8 432 aa22.49■■□□□ 1.19
COL4A3BP-201ENST00000261415 ATP6V0A2Q9Y487 856 aa22.49■■□□□ 1.19
COL4A3BP-201ENST00000261415 UQCRFS1P1P0C7P4 283 aa22.48■■□□□ 1.19
COL4A3BP-201ENST00000261415 BCAMP50895 628 aa22.48■■□□□ 1.19
COL4A3BP-201ENST00000261415 FSD1Q9BTV5 496 aa22.48■■□□□ 1.19
COL4A3BP-201ENST00000261415 LEMD3Q9Y2U8 911 aa22.48■■□□□ 1.19
COL4A3BP-201ENST00000261415 GOLIM4O00461 696 aa22.48■■□□□ 1.19
COL4A3BP-201ENST00000261415 KLRK1P26718 216 aa22.48■■□□□ 1.19
COL4A3BP-201ENST00000261415 SNRKQ9NRH2 765 aa22.48■■□□□ 1.19
COL4A3BP-201ENST00000261415 NSFL1CQ9UNZ2 370 aaKnown RBP22.48■■□□□ 1.19
COL4A3BP-201ENST00000261415 DUOX1Q9NRD9 1551 aa22.48■■□□□ 1.19
COL4A3BP-201ENST00000261415 GYG1P46976 350 aa22.47■■□□□ 1.19
COL4A3BP-201ENST00000261415 FKBP4Q02790 459 aaKnown RBP eCLIP22.47■■□□□ 1.19
COL4A3BP-201ENST00000261415 PI16Q6UXB8 463 aa22.47■■□□□ 1.19
COL4A3BP-201ENST00000261415 CAVIN4Q5BKX8 364 aa22.46■■□□□ 1.19
COL4A3BP-201ENST00000261415 SGIP1Q9BQI5 828 aa22.46■■□□□ 1.19
COL4A3BP-201ENST00000261415 IRS2Q9Y4H2 1338 aa22.46■■□□□ 1.19
COL4A3BP-201ENST00000261415 ZAP70P43403 619 aa22.46■■□□□ 1.19
COL4A3BP-201ENST00000261415 PRPF40BQ6NWY9 871 aaKnown RBP22.46■■□□□ 1.19
COL4A3BP-201ENST00000261415 CNKSR1Q969H4 720 aa22.46■■□□□ 1.19
COL4A3BP-201ENST00000261415 GOLGB1Q14789 3259 aaKnown RBP22.46■■□□□ 1.19
COL4A3BP-201ENST00000261415 RFX7Q2KHR2 1363 aa22.46■■□□□ 1.19
COL4A3BP-201ENST00000261415 RASGRF1Q13972 1273 aa22.45■■□□□ 1.18
COL4A3BP-201ENST00000261415 KBTBD3Q8NAB2 608 aa22.45■■□□□ 1.18
COL4A3BP-201ENST00000261415 FAM84BQ96KN1 310 aaPredicted RBP22.45■■□□□ 1.18
COL4A3BP-201ENST00000261415 ZNF830Q96NB3 372 aaPredicted RBP22.45■■□□□ 1.18
COL4A3BP-201ENST00000261415 UFL1O94874 794 aa22.45■■□□□ 1.18
COL4A3BP-201ENST00000261415 ESYT1Q9BSJ8 1104 aa22.45■■□□□ 1.18
COL4A3BP-201ENST00000261415 DIAPH3Q9NSV4 1193 aa22.45■■□□□ 1.18
COL4A3BP-201ENST00000261415 GGA1Q9UJY5 639 aa22.45■■□□□ 1.18
COL4A3BP-201ENST00000261415 ATP2B4P23634 1241 aa22.44■■□□□ 1.18
COL4A3BP-201ENST00000261415 TXNRD3Q86VQ6 643 aa22.44■■□□□ 1.18
COL4A3BP-201ENST00000261415 HMG20BQ9P0W2 317 aa22.44■■□□□ 1.18
COL4A3BP-201ENST00000261415 CCDC88AQ3V6T2 1871 aa22.44■■□□□ 1.18
COL4A3BP-201ENST00000261415 OLFM4Q6UX06 510 aa22.43■■□□□ 1.18
COL4A3BP-201ENST00000261415 FBXO33Q7Z6M2 555 aa22.43■■□□□ 1.18
COL4A3BP-201ENST00000261415 VPS37DQ86XT2 251 aa22.43■■□□□ 1.18
COL4A3BP-201ENST00000261415 SPATA5Q8NB90 893 aa22.43■■□□□ 1.18
COL4A3BP-201ENST00000261415 HIP1O00291 1037 aa22.43■■□□□ 1.18
COL4A3BP-201ENST00000261415 KIAA2012Q0VF49 1180 aa22.43■■□□□ 1.18
COL4A3BP-201ENST00000261415 GNL3LQ9NVN8 582 aaKnown RBP22.43■■□□□ 1.18
COL4A3BP-201ENST00000261415 CHD4Q14839 1912 aa22.43■■□□□ 1.18
COL4A3BP-201ENST00000261415 COL1A1P02452 1464 aaPredicted RBP22.43■■□□□ 1.18
COL4A3BP-201ENST00000261415 CWC27Q6UX04 472 aaKnown RBP22.42■■□□□ 1.18
COL4A3BP-201ENST00000261415 TBC1D16Q8TBP0 767 aa22.42■■□□□ 1.18
COL4A3BP-201ENST00000261415 CYP2E1P05181 493 aaPredicted RBP22.42■■□□□ 1.18
COL4A3BP-201ENST00000261415 HIBADHP31937 336 aaKnown RBP22.42■■□□□ 1.18
COL4A3BP-201ENST00000261415 PTGER2P43116 358 aa22.42■■□□□ 1.18
COL4A3BP-201ENST00000261415 GPR101Q96P66 508 aaPredicted RBP22.42■■□□□ 1.18
COL4A3BP-201ENST00000261415 TMX4Q9H1E5 349 aaPredicted RBP22.42■■□□□ 1.18
COL4A3BP-201ENST00000261415 IL25Q9H293 177 aa22.42■■□□□ 1.18
COL4A3BP-201ENST00000261415 POLLQ9UGP5 575 aa22.42■■□□□ 1.18
COL4A3BP-201ENST00000261415 IQSEC3Q9UPP2 1182 aaPredicted RBP22.42■■□□□ 1.18
COL4A3BP-201ENST00000261415 DPEP1P16444 411 aa22.41■■□□□ 1.18
COL4A3BP-201ENST00000261415 C15orf52Q6ZUT6 534 aaKnown RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms