RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 BICC1Q9H694 974 aaKnown RBP21.31■■□□□ 1
CGREF1-201ENST00000260595 RIPOR2Q9Y4F9 1068 aa21.31■■□□□ 1
CGREF1-201ENST00000260595 PAPPA2Q9BXP8 1791 aa21.31■■□□□ 1
CGREF1-201ENST00000260595 UBE4AQ14139 1066 aa21.3■■□□□ 1
CGREF1-201ENST00000260595 MTMR14Q8NCE2 650 aa21.3■■□□□ 1
CGREF1-201ENST00000260595 CSRNP1Q96S65 589 aa21.3■■□□□ 1
CGREF1-201ENST00000260595 UBE2Q2LH0YL09 131 aa21.29■■□□□ 1
CGREF1-201ENST00000260595 ALDH1L2Q3SY69 923 aa21.29■■□□□ 1
CGREF1-201ENST00000260595 USP44Q9H0E7 712 aa21.29■■□□□ 1
CGREF1-201ENST00000260595 SAGE1Q9NXZ1 904 aa21.29■■□□□ 1
CGREF1-201ENST00000260595 PCDHAC2Q9Y5I4 1007 aa21.29■■□□□ 1
CGREF1-201ENST00000260595 DLGAP5Q15398 846 aa21.28■■□□□ 1
CGREF1-201ENST00000260595 APOBEC3FQ8IUX4 373 aaKnown RBP21.28■■□□□ 1
CGREF1-201ENST00000260595 TDRD7Q8NHU6 1098 aaKnown RBP21.28■■□□□ 1
CGREF1-201ENST00000260595 RNF186Q9NXI6 227 aa21.28■■□□□ 1
CGREF1-201ENST00000260595 JAG2Q9Y219 1238 aa21.28■■□□□ 1
CGREF1-201ENST00000260595 FAM205AQ6ZU69 1335 aa21.28■■□□□ 1
CGREF1-201ENST00000260595 FAM84BQ96KN1 310 aaPredicted RBP21.27■■□□□ 1
CGREF1-201ENST00000260595 MROH5Q6ZUA9 1318 aa21.27■□□□□ 0.99
CGREF1-201ENST00000260595 F8W031 263 aaPredicted RBP21.26■□□□□ 0.99
CGREF1-201ENST00000260595 GYG1P46976 350 aa21.26■□□□□ 0.99
CGREF1-201ENST00000260595 LRRC24Q50LG9 513 aa21.26■□□□□ 0.99
CGREF1-201ENST00000260595 TRPA1O75762 1119 aa21.25■□□□□ 0.99
CGREF1-201ENST00000260595 HIBADHP31937 336 aaKnown RBP21.25■□□□□ 0.99
CGREF1-201ENST00000260595 NF2P35240 595 aa21.25■□□□□ 0.99
CGREF1-201ENST00000260595 CFAP100Q494V2 611 aa21.25■□□□□ 0.99
CGREF1-201ENST00000260595 REM2Q8IYK8 340 aaPredicted RBP21.25■□□□□ 0.99
CGREF1-201ENST00000260595 PRMT6Q96LA8 375 aaPredicted RBP21.25■□□□□ 0.99
CGREF1-201ENST00000260595 AOX1Q06278 1338 aa21.25■□□□□ 0.99
CGREF1-201ENST00000260595 SPDYE2BA6NHP3 402 aa21.24■□□□□ 0.99
CGREF1-201ENST00000260595 CCER2I3L3R5 266 aa21.24■□□□□ 0.99
CGREF1-201ENST00000260595 SPDYE6P0CI01 402 aa21.24■□□□□ 0.99
CGREF1-201ENST00000260595 TTLL12Q14166 644 aaPredicted RBP21.24■□□□□ 0.99
CGREF1-201ENST00000260595 VGLL2Q8N8G2 317 aa21.24■□□□□ 0.99
CGREF1-201ENST00000260595 DEFB129Q9H1M3 183 aa21.24■□□□□ 0.99
CGREF1-201ENST00000260595 FBXO33Q7Z6M2 555 aa21.23■□□□□ 0.99
CGREF1-201ENST00000260595 KLHDC4Q8TBB5 520 aa21.23■□□□□ 0.99
CGREF1-201ENST00000260595 MCOLN1Q9GZU1 580 aa21.23■□□□□ 0.99
CGREF1-201ENST00000260595 SMC4Q9NTJ3 1288 aa21.23■□□□□ 0.99
CGREF1-201ENST00000260595 COL1A1P02452 1464 aaPredicted RBP21.22■□□□□ 0.99
CGREF1-201ENST00000260595 PTPN12Q05209 780 aaKnown RBP21.22■□□□□ 0.99
CGREF1-201ENST00000260595 MFSD14BQ5SR56 506 aa21.22■□□□□ 0.99
CGREF1-201ENST00000260595 LDLRAD1Q5T700 205 aa21.22■□□□□ 0.99
CGREF1-201ENST00000260595 CASP8AP2Q9UKL3 1982 aa21.21■□□□□ 0.99
CGREF1-201ENST00000260595 CLRN2A0PK11 232 aa21.21■□□□□ 0.99
CGREF1-201ENST00000260595 PDE8BO95263 885 aa21.21■□□□□ 0.99
CGREF1-201ENST00000260595 CT47B1P0C2W7 299 aaPredicted RBP21.21■□□□□ 0.99
CGREF1-201ENST00000260595 RFX5P48382 616 aaPredicted RBP21.21■□□□□ 0.99
CGREF1-201ENST00000260595 PRKG1Q13976 671 aa21.21■□□□□ 0.99
CGREF1-201ENST00000260595 METTL24Q5JXM2 366 aa21.21■□□□□ 0.99
CGREF1-201ENST00000260595 ARMC9Q7Z3E5 817 aa21.21■□□□□ 0.99
CGREF1-201ENST00000260595 PPP2R3BQ9Y5P8 575 aa21.21■□□□□ 0.99
CGREF1-201ENST00000260595 FZD1Q9UP38 647 aa21.2■□□□□ 0.98
CGREF1-201ENST00000260595 SSC5DA1L4H1 1573 aa21.19■□□□□ 0.98
CGREF1-201ENST00000260595 MYO1BO43795 1136 aa21.19■□□□□ 0.98
CGREF1-201ENST00000260595 TM4SF4P48230 202 aa21.19■□□□□ 0.98
CGREF1-201ENST00000260595 DGKZQ13574 1117 aa21.19■□□□□ 0.98
CGREF1-201ENST00000260595 MAP3K11Q16584 847 aa21.19■□□□□ 0.98
CGREF1-201ENST00000260595 SERPINA10Q9UK55 444 aa21.19■□□□□ 0.98
CGREF1-201ENST00000260595 NOB1Q9ULX3 412 aaKnown RBP21.19■□□□□ 0.98
CGREF1-201ENST00000260595 ANGEL1Q9UNK9 670 aaKnown RBP21.19■□□□□ 0.98
CGREF1-201ENST00000260595 TTF2Q9UNY4 1162 aaKnown RBP21.19■□□□□ 0.98
CGREF1-201ENST00000260595 FGFR2P21802 821 aa21.18■□□□□ 0.98
CGREF1-201ENST00000260595 RBM5P52756 815 aaKnown RBP eCLIP21.18■□□□□ 0.98
CGREF1-201ENST00000260595 GRIK5Q16478 980 aa21.18■□□□□ 0.98
CGREF1-201ENST00000260595 CCDC85CA6NKD9 419 aa21.17■□□□□ 0.98
CGREF1-201ENST00000260595 VEZTQ9HBM0 779 aa21.17■□□□□ 0.98
CGREF1-201ENST00000260595 IQSEC3Q9UPP2 1182 aaPredicted RBP21.17■□□□□ 0.98
CGREF1-201ENST00000260595 EYA2O00167 538 aa21.16■□□□□ 0.98
CGREF1-201ENST00000260595 BCAMP50895 628 aa21.16■□□□□ 0.98
CGREF1-201ENST00000260595 MKRN3Q13064 507 aaKnown RBP21.16■□□□□ 0.98
CGREF1-201ENST00000260595 RASA3Q14644 834 aa21.16■□□□□ 0.98
CGREF1-201ENST00000260595 SPDYE2Q495Y8 402 aa21.16■□□□□ 0.98
CGREF1-201ENST00000260595 CAVIN4Q5BKX8 364 aa21.16■□□□□ 0.98
CGREF1-201ENST00000260595 NBPF12Q5TAG4 269 aaPredicted RBP21.16■□□□□ 0.98
CGREF1-201ENST00000260595 SPRYD7Q5W111 196 aa21.16■□□□□ 0.98
CGREF1-201ENST00000260595 VPS37DQ86XT2 251 aa21.16■□□□□ 0.98
CGREF1-201ENST00000260595 ZNF70Q9UC06 446 aaPredicted RBP21.16■□□□□ 0.98
CGREF1-201ENST00000260595 KIF16BQ96L93 1317 aa21.15■□□□□ 0.98
CGREF1-201ENST00000260595 SUPT20HL1Q3ZLR7 823 aa21.15■□□□□ 0.98
CGREF1-201ENST00000260595 ATG9AQ7Z3C6 839 aa21.15■□□□□ 0.98
CGREF1-201ENST00000260595 DZIP1LQ8IYY4 767 aaKnown RBP21.15■□□□□ 0.98
CGREF1-201ENST00000260595 TDRD3Q9H7E2 651 aaKnown RBP21.15■□□□□ 0.98
CGREF1-201ENST00000260595 AKAP11Q9UKA4 1901 aa21.14■□□□□ 0.98
CGREF1-201ENST00000260595 ECM29Q5VYK3 1845 aa21.14■□□□□ 0.97
CGREF1-201ENST00000260595 PPP1R12BO60237 982 aaPredicted RBP21.14■□□□□ 0.97
CGREF1-201ENST00000260595 CRKP46108 304 aa21.14■□□□□ 0.97
CGREF1-201ENST00000260595 RARSP54136 660 aaKnown RBP21.14■□□□□ 0.97
CGREF1-201ENST00000260595 CHAF1AQ13111 956 aaPredicted RBP21.14■□□□□ 0.97
CGREF1-201ENST00000260595 PUM3Q15397 648 aaKnown RBP21.14■□□□□ 0.97
CGREF1-201ENST00000260595 API5Q9BZZ5 524 aaKnown RBP21.14■□□□□ 0.97
CGREF1-201ENST00000260595 TBC1D8O95759 1140 aa21.13■□□□□ 0.97
CGREF1-201ENST00000260595 UBTFL1P0CB47 393 aaPredicted RBP21.13■□□□□ 0.97
CGREF1-201ENST00000260595 TBC1D22AQ8WUA7 517 aa21.13■□□□□ 0.97
CGREF1-201ENST00000260595 SLC10A4Q96EP9 437 aa21.13■□□□□ 0.97
CGREF1-201ENST00000260595 CLMNQ96JQ2 1002 aa21.13■□□□□ 0.97
CGREF1-201ENST00000260595 UNCXA6NJT0 531 aa21.12■□□□□ 0.97
CGREF1-201ENST00000260595 USP2O75604 605 aaPredicted RBP21.12■□□□□ 0.97
CGREF1-201ENST00000260595 IFIT1P09914 478 aaKnown RBP21.12■□□□□ 0.97
CGREF1-201ENST00000260595 RGS19P49795 217 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms