RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 PRC1O43663 620 aa11.04□□□□□ -0.64
CTDSPL2-201ENST00000260327 KRT83P78385 493 aa11.04□□□□□ -0.64
CTDSPL2-201ENST00000260327 LRMPQ12912 555 aa11.04□□□□□ -0.64
CTDSPL2-201ENST00000260327 LMBR1LQ6UX01 489 aa11.04□□□□□ -0.64
CTDSPL2-201ENST00000260327 VAT1LQ9HCJ6 419 aa11.04□□□□□ -0.64
CTDSPL2-201ENST00000260327 DUOX2Q9NRD8 1548 aa11.04□□□□□ -0.64
CTDSPL2-201ENST00000260327 NCKAP5LQ9HCH0 1330 aa11.04□□□□□ -0.64
CTDSPL2-201ENST00000260327 LACTBP83111 547 aaPredicted RBP11.04□□□□□ -0.64
CTDSPL2-201ENST00000260327 ZBTB16Q05516 673 aa11.04□□□□□ -0.64
CTDSPL2-201ENST00000260327 VIMP08670 466 aaKnown RBP11.04□□□□□ -0.64
CTDSPL2-201ENST00000260327 ZNF215Q9UL58 517 aaPredicted RBP11.04□□□□□ -0.64
CTDSPL2-201ENST00000260327 FRMD3A2A2Y4 597 aa11.04□□□□□ -0.64
CTDSPL2-201ENST00000260327 CCDC122Q5T0U0 273 aa11.04□□□□□ -0.64
CTDSPL2-201ENST00000260327 KSR2Q6VAB6 950 aa11.04□□□□□ -0.64
CTDSPL2-201ENST00000260327 EXOC1Q9NV70 894 aa11.04□□□□□ -0.64
CTDSPL2-201ENST00000260327 SBNO2Q9Y2G9 1366 aa11.03□□□□□ -0.64
CTDSPL2-201ENST00000260327 UHRF1BP1Q6BDS2 1440 aa11.03□□□□□ -0.64
CTDSPL2-201ENST00000260327 GSPT1P15170 499 aaKnown RBP11.03□□□□□ -0.64
CTDSPL2-201ENST00000260327 PNMA8AQ86V59 439 aaPredicted RBP11.03□□□□□ -0.64
CTDSPL2-201ENST00000260327 PPP1R14CQ8TAE6 165 aa11.03□□□□□ -0.64
CTDSPL2-201ENST00000260327 CCDC42Q96M95 316 aa11.03□□□□□ -0.64
CTDSPL2-201ENST00000260327 SELENOOQ9BVL4 669 aa11.03□□□□□ -0.64
CTDSPL2-201ENST00000260327 A2MP01023 1474 aa11.03□□□□□ -0.64
CTDSPL2-201ENST00000260327 ARFGAP2Q8N6H7 521 aa11.03□□□□□ -0.64
CTDSPL2-201ENST00000260327 CCT6AP40227 531 aaKnown RBP11.03□□□□□ -0.64
CTDSPL2-201ENST00000260327 WTAPQ15007 396 aa11.03□□□□□ -0.64
CTDSPL2-201ENST00000260327 AKR1B15C9JRZ8 316 aaPredicted RBP11.03□□□□□ -0.64
CTDSPL2-201ENST00000260327 LIG3P49916 1009 aa11.03□□□□□ -0.64
CTDSPL2-201ENST00000260327 ZNF444Q8N0Y2 327 aaPredicted RBP11.03□□□□□ -0.64
CTDSPL2-201ENST00000260327 TCP11L1Q9NUJ3 509 aa11.03□□□□□ -0.64
CTDSPL2-201ENST00000260327 PAG1Q9NWQ8 432 aa11.03□□□□□ -0.64
CTDSPL2-201ENST00000260327 CEBPAP49715 358 aaPredicted RBP11.03□□□□□ -0.64
CTDSPL2-201ENST00000260327 RNASE9P60153 205 aaKnown RBP11.03□□□□□ -0.64
CTDSPL2-201ENST00000260327 TMEM266Q2M3C6 531 aa11.03□□□□□ -0.64
CTDSPL2-201ENST00000260327 CCDC25Q86WR0 208 aa11.03□□□□□ -0.64
CTDSPL2-201ENST00000260327 GPT2Q8TD30 523 aa11.03□□□□□ -0.64
CTDSPL2-201ENST00000260327 PNMA6EA0A0J9YXQ4 647 aa11.02□□□□□ -0.64
CTDSPL2-201ENST00000260327 TTF1Q15361 905 aaPredicted RBP11.02□□□□□ -0.64
CTDSPL2-201ENST00000260327 CALML4Q96GE6 196 aa11.02□□□□□ -0.64
CTDSPL2-201ENST00000260327 NAPGQ99747 312 aaPredicted RBP11.02□□□□□ -0.64
CTDSPL2-201ENST00000260327 CAPN7Q9Y6W3 813 aa11.02□□□□□ -0.64
CTDSPL2-201ENST00000260327 IFI16Q16666 785 aaKnown RBP11.02□□□□□ -0.64
CTDSPL2-201ENST00000260327 UTP14CQ5TAP6 766 aaKnown RBP11.02□□□□□ -0.64
CTDSPL2-201ENST00000260327 DZIP1Q86YF9 867 aaKnown RBP11.02□□□□□ -0.64
CTDSPL2-201ENST00000260327 GCKP35557 465 aa11.02□□□□□ -0.65
CTDSPL2-201ENST00000260327 APBB1IPQ7Z5R6 666 aaPredicted RBP11.02□□□□□ -0.65
CTDSPL2-201ENST00000260327 WDR66Q8TBY9 1149 aa11.02□□□□□ -0.65
CTDSPL2-201ENST00000260327 STAT6P42226 847 aa11.02□□□□□ -0.65
CTDSPL2-201ENST00000260327 TUBB4BP68371 445 aa11.02□□□□□ -0.65
CTDSPL2-201ENST00000260327 TFCP2Q12800 502 aa11.02□□□□□ -0.65
CTDSPL2-201ENST00000260327 SPAG5Q96R06 1193 aa11.02□□□□□ -0.65
CTDSPL2-201ENST00000260327 TMEM110-MUSTN1A8MSY1 372 aa11.02□□□□□ -0.65
CTDSPL2-201ENST00000260327 MYL5Q02045 173 aa11.02□□□□□ -0.65
CTDSPL2-201ENST00000260327 TRMT1LQ7Z2T5 733 aaKnown RBP11.02□□□□□ -0.65
CTDSPL2-201ENST00000260327 ANKRD24Q8TF21 1146 aa11.02□□□□□ -0.65
CTDSPL2-201ENST00000260327 FAM227BQ96M60 508 aa11.02□□□□□ -0.65
CTDSPL2-201ENST00000260327 RMND1Q9NWS8 449 aa11.02□□□□□ -0.65
CTDSPL2-201ENST00000260327 PEX19P40855 299 aa11.01□□□□□ -0.65
CTDSPL2-201ENST00000260327 AMPD3Q01432 767 aa11.01□□□□□ -0.65
CTDSPL2-201ENST00000260327 DHX32Q7L7V1 743 aaKnown RBP11.01□□□□□ -0.65
CTDSPL2-201ENST00000260327 ALDH1L1O75891 902 aa11.01□□□□□ -0.65
CTDSPL2-201ENST00000260327 ATP11AP98196 1134 aa11.01□□□□□ -0.65
CTDSPL2-201ENST00000260327 CDC37L1Q7L3B6 337 aa11.01□□□□□ -0.65
CTDSPL2-201ENST00000260327 BICC1Q9H694 974 aaKnown RBP11.01□□□□□ -0.65
CTDSPL2-201ENST00000260327 SNRPA1P09661 255 aaKnown RBP11.01□□□□□ -0.65
CTDSPL2-201ENST00000260327 SPAG1Q07617 926 aa11.01□□□□□ -0.65
CTDSPL2-201ENST00000260327 RTN1Q16799 776 aa11.01□□□□□ -0.65
CTDSPL2-201ENST00000260327 GRIPAP1Q4V328 841 aa11.01□□□□□ -0.65
CTDSPL2-201ENST00000260327 SEC62Q99442 399 aaKnown RBP11.01□□□□□ -0.65
CTDSPL2-201ENST00000260327 PYCARDQ9ULZ3 195 aa11.01□□□□□ -0.65
CTDSPL2-201ENST00000260327 IQSEC3Q9UPP2 1182 aaPredicted RBP11.01□□□□□ -0.65
CTDSPL2-201ENST00000260327 TSPY2A6NKD2 308 aa11.01□□□□□ -0.65
CTDSPL2-201ENST00000260327 SLC27A2O14975 620 aa11.01□□□□□ -0.65
CTDSPL2-201ENST00000260327 RPS6KB1P23443 525 aa11.01□□□□□ -0.65
CTDSPL2-201ENST00000260327 FANCCQ00597 558 aa11.01□□□□□ -0.65
CTDSPL2-201ENST00000260327 RGS22Q8NE09 1264 aa11.01□□□□□ -0.65
CTDSPL2-201ENST00000260327 TACO1Q9BSH4 297 aaKnown RBP11.01□□□□□ -0.65
CTDSPL2-201ENST00000260327 CLSTN2Q9H4D0 955 aa11.01□□□□□ -0.65
CTDSPL2-201ENST00000260327 NCOA5Q9HCD5 579 aaKnown RBP11.01□□□□□ -0.65
CTDSPL2-201ENST00000260327 BAIAP2L1Q9UHR4 511 aa11.01□□□□□ -0.65
CTDSPL2-201ENST00000260327 IKBKGQ9Y6K9 419 aa11.01□□□□□ -0.65
CTDSPL2-201ENST00000260327 UNC13AQ9UPW8 1703 aa11.01□□□□□ -0.65
CTDSPL2-201ENST00000260327 GOLGA6BA6NDN3 693 aa11.01□□□□□ -0.65
CTDSPL2-201ENST00000260327 ATP6V1AP38606 617 aa11.01□□□□□ -0.65
CTDSPL2-201ENST00000260327 RASAL2Q9UJF2 1139 aa11.01□□□□□ -0.65
CTDSPL2-201ENST00000260327 CD2BP2O95400 341 aaKnown RBP11.01□□□□□ -0.65
CTDSPL2-201ENST00000260327 SLC9C2Q5TAH2 1124 aa11.01□□□□□ -0.65
CTDSPL2-201ENST00000260327 RPAINQ86UA6 219 aa11.01□□□□□ -0.65
CTDSPL2-201ENST00000260327 NAP1L3Q99457 506 aaPredicted RBP11.01□□□□□ -0.65
CTDSPL2-201ENST00000260327 RAB34Q9BZG1 259 aa11.01□□□□□ -0.65
CTDSPL2-201ENST00000260327 SPATA31E1Q6ZUB1 1445 aa11□□□□□ -0.65
CTDSPL2-201ENST00000260327 BRD1O95696 1058 aa11□□□□□ -0.65
CTDSPL2-201ENST00000260327 LRCH2Q5VUJ6 765 aa11□□□□□ -0.65
CTDSPL2-201ENST00000260327 FEZ2Q9UHY8 353 aaPredicted RBP11□□□□□ -0.65
CTDSPL2-201ENST00000260327 TUBBP07437 444 aa11□□□□□ -0.65
CTDSPL2-201ENST00000260327 WWC2Q6AWC2 1192 aa11□□□□□ -0.65
CTDSPL2-201ENST00000260327 PLEKHA4Q9H4M7 779 aa11□□□□□ -0.65
CTDSPL2-201ENST00000260327 MKRN1Q9UHC7 482 aaKnown RBP11□□□□□ -0.65
CTDSPL2-201ENST00000260327 NUTM2BA6NNL0 878 aaPredicted RBP11□□□□□ -0.65
CTDSPL2-201ENST00000260327 NUTM2EB1AL46 878 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms