RNA–Protein interactions for RNA: ENST00000260197.11

SORL1-201, Transcript of sortilin related receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORL1, Length 10,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-201ENST00000260197 UQCRFS1P1P0C7P4 283 aa13.18□□□□□ -0.3
SORL1-201ENST00000260197 PTGS1P23219 599 aa13.18□□□□□ -0.3
SORL1-201ENST00000260197 NAP1L3Q99457 506 aaPredicted RBP13.18□□□□□ -0.3
SORL1-201ENST00000260197 POLR3AO14802 1390 aaPredicted RBP13.18□□□□□ -0.3
SORL1-201ENST00000260197 TRIM75PA6NK02 468 aa13.17□□□□□ -0.3
SORL1-201ENST00000260197 BLMP54132 1417 aaPredicted RBP13.17□□□□□ -0.3
SORL1-201ENST00000260197 SMC5Q8IY18 1101 aa13.17□□□□□ -0.3
SORL1-201ENST00000260197 ARHGEF5Q12774 1597 aa13.17□□□□□ -0.3
SORL1-201ENST00000260197 GRM8O00222 908 aa13.17□□□□□ -0.3
SORL1-201ENST00000260197 CAPZA3Q96KX2 299 aa13.17□□□□□ -0.3
SORL1-201ENST00000260197 IMPG2Q9BZV3 1241 aa13.17□□□□□ -0.3
SORL1-201ENST00000260197 TRAF1Q13077 416 aa13.17□□□□□ -0.3
SORL1-201ENST00000260197 STX8Q9UNK0 236 aa13.17□□□□□ -0.3
SORL1-201ENST00000260197 MARCKSP29966 332 aaPredicted RBP13.17□□□□□ -0.3
SORL1-201ENST00000260197 PRIM1P49642 420 aaKnown RBP13.17□□□□□ -0.3
SORL1-201ENST00000260197 ST5P78524 1137 aa13.17□□□□□ -0.3
SORL1-201ENST00000260197 DDX46Q7L014 1031 aaKnown RBP13.17□□□□□ -0.3
SORL1-201ENST00000260197 ATP5DP30049 168 aa13.17□□□□□ -0.3
SORL1-201ENST00000260197 CHMP4BP1P59074 171 aa13.17□□□□□ -0.3
SORL1-201ENST00000260197 DNAJC25Q9H1X3 360 aa13.16□□□□□ -0.3
SORL1-201ENST00000260197 ANAPC4Q9UJX5 808 aa13.16□□□□□ -0.3
SORL1-201ENST00000260197 MSANTD4Q8NCY6 345 aa13.16□□□□□ -0.3
SORL1-201ENST00000260197 DAAM2Q86T65 1068 aa13.16□□□□□ -0.3
SORL1-201ENST00000260197 ATRIPQ8WXE1 791 aa13.16□□□□□ -0.3
SORL1-201ENST00000260197 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.16□□□□□ -0.36e-6■□□□□ 11.1
SORL1-201ENST00000260197 A2MP01023 1474 aa13.16□□□□□ -0.3
SORL1-201ENST00000260197 CEP83Q9Y592 693 aa13.16□□□□□ -0.3
SORL1-201ENST00000260197 RBM8AQ9Y5S9 174 aaKnown RBP13.16□□□□□ -0.3
SORL1-201ENST00000260197 WDR7Q9Y4E6 1490 aa13.16□□□□□ -0.3
SORL1-201ENST00000260197 LMOD1P29536 600 aaPredicted RBP13.16□□□□□ -0.3
SORL1-201ENST00000260197 NBPF6Q5VWK0 638 aa13.16□□□□□ -0.3
SORL1-201ENST00000260197 NBPF5PQ86XG9 351 aaPredicted RBP13.16□□□□□ -0.3
SORL1-201ENST00000260197 ANKRD44Q8N8A2 993 aa13.16□□□□□ -0.3
SORL1-201ENST00000260197 RHPN1Q8TCX5 695 aa13.16□□□□□ -0.3
SORL1-201ENST00000260197 NBPF4Q96M43 638 aa13.16□□□□□ -0.3
SORL1-201ENST00000260197 ZNF830Q96NB3 372 aaPredicted RBP13.16□□□□□ -0.3
SORL1-201ENST00000260197 VPS18Q9P253 973 aa13.16□□□□□ -0.3
SORL1-201ENST00000260197 NUP153P49790 1475 aaKnown RBP13.16□□□□□ -0.3
SORL1-201ENST00000260197 RSRC1Q96IZ7 334 aaKnown RBP13.16□□□□□ -0.3
SORL1-201ENST00000260197 UTP14AQ9BVJ6 771 aaKnown RBP13.16□□□□□ -0.3
SORL1-201ENST00000260197 MRPS9P82933 396 aaKnown RBP13.16□□□□□ -0.3
SORL1-201ENST00000260197 NBPF11Q86T75 865 aa13.16□□□□□ -0.3
SORL1-201ENST00000260197 CCDC50Q8IVM0 306 aa13.16□□□□□ -0.3
SORL1-201ENST00000260197 CCDC42Q96M95 316 aa13.16□□□□□ -0.3
SORL1-201ENST00000260197 MTRF1LQ9UGC7 380 aaKnown RBP13.16□□□□□ -0.3
SORL1-201ENST00000260197 SYNRGQ9UMZ2 1314 aa13.16□□□□□ -0.3
SORL1-201ENST00000260197 ABCC2Q92887 1545 aa13.16□□□□□ -0.3
SORL1-201ENST00000260197 TTC37Q6PGP7 1564 aa13.16□□□□□ -0.3
SORL1-201ENST00000260197 NAPAP54920 295 aa13.15□□□□□ -0.3
SORL1-201ENST00000260197 PLCG2P16885 1265 aa13.15□□□□□ -0.3
SORL1-201ENST00000260197 RAB3IL1Q8TBN0 382 aa13.15□□□□□ -0.3
SORL1-201ENST00000260197 CALM1P0DP23 149 aa13.15□□□□□ -0.3
SORL1-201ENST00000260197 CALM2P0DP24 149 aa13.15□□□□□ -0.3
SORL1-201ENST00000260197 CALM3P0DP25 149 aa13.15□□□□□ -0.3
SORL1-201ENST00000260197 ALDH3A1P30838 453 aa13.15□□□□□ -0.3
SORL1-201ENST00000260197 TNNC1P63316 161 aa13.15□□□□□ -0.3
SORL1-201ENST00000260197 ANKRD13DQ6ZTN6 518 aa13.15□□□□□ -0.3
SORL1-201ENST00000260197 ZNF804AQ7Z570 1209 aa13.15□□□□□ -0.3
SORL1-201ENST00000260197 MRVI1Q9Y6F6 885 aa13.15□□□□□ -0.3
SORL1-201ENST00000260197 AOX1Q06278 1338 aa13.15□□□□□ -0.3
SORL1-201ENST00000260197 ADGRF5Q8IZF2 1346 aa13.15□□□□□ -0.3
SORL1-201ENST00000260197 OTUD6BQ8N6M0 293 aa13.15□□□□□ -0.3
SORL1-201ENST00000260197 IFT74Q96LB3 600 aa13.15□□□□□ -0.3
SORL1-201ENST00000260197 C8orf34Q49A92 452 aa13.15□□□□□ -0.3
SORL1-201ENST00000260197 BRF1Q92994 677 aa13.15□□□□□ -0.3
SORL1-201ENST00000260197 DACT1Q9NYF0 836 aa13.15□□□□□ -0.3
SORL1-201ENST00000260197 GUCA1BQ9UMX6 200 aa13.15□□□□□ -0.3
SORL1-201ENST00000260197 UHRF1BP1LA0JNW5 1464 aa13.15□□□□□ -0.3
SORL1-201ENST00000260197 TRIM14Q14142 442 aa13.15□□□□□ -0.31
SORL1-201ENST00000260197 TTLL12Q14166 644 aaPredicted RBP13.15□□□□□ -0.31
SORL1-201ENST00000260197 NECAB1Q8N987 351 aa13.15□□□□□ -0.31
SORL1-201ENST00000260197 C6orf50Q9HD87 102 aa13.15□□□□□ -0.31
SORL1-201ENST00000260197 ARID5AQ03989 594 aa13.14□□□□□ -0.31
SORL1-201ENST00000260197 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.14□□□□□ -0.31
SORL1-201ENST00000260197 RAB11FIP4Q86YS3 637 aa13.14□□□□□ -0.31
SORL1-201ENST00000260197 FLT4P35916 1363 aa13.14□□□□□ -0.31
SORL1-201ENST00000260197 RUFY3Q7L099 469 aa13.14□□□□□ -0.31
SORL1-201ENST00000260197 PHF8Q9UPP1 1060 aa13.14□□□□□ -0.31
SORL1-201ENST00000260197 CEP57Q86XR8 500 aa13.14□□□□□ -0.31
SORL1-201ENST00000260197 OGFRQ9NZT2 677 aa13.14□□□□□ -0.31
SORL1-201ENST00000260197 STIM2Q9P246 746 aa13.14□□□□□ -0.31
SORL1-201ENST00000260197 FAM83GA6ND36 823 aa13.14□□□□□ -0.31
SORL1-201ENST00000260197 LDHAL6AQ6ZMR3 332 aa13.14□□□□□ -0.31
SORL1-201ENST00000260197 CCDC186Q7Z3E2 898 aa13.14□□□□□ -0.31
SORL1-201ENST00000260197 CPLX4Q7Z7G2 160 aa13.14□□□□□ -0.31
SORL1-201ENST00000260197 NINQ8N4C6 2090 aa13.14□□□□□ -0.31
SORL1-201ENST00000260197 SETDB1Q15047 1291 aa13.14□□□□□ -0.31
SORL1-201ENST00000260197 GPTP24298 496 aa13.14□□□□□ -0.31
SORL1-201ENST00000260197 EEF2P13639 858 aaKnown RBP13.14□□□□□ -0.31
SORL1-201ENST00000260197 FAM160A1Q05DH4 1040 aa13.14□□□□□ -0.31
SORL1-201ENST00000260197 TUBB2AQ13885 445 aa13.14□□□□□ -0.31
SORL1-201ENST00000260197 SEPT6Q14141 434 aa13.14□□□□□ -0.31
SORL1-201ENST00000260197 HSP90AA4PQ58FG1 418 aa13.14□□□□□ -0.31
SORL1-201ENST00000260197 TUBB2BQ9BVA1 445 aa13.14□□□□□ -0.31
SORL1-201ENST00000260197 ATP2C2O75185 946 aa13.14□□□□□ -0.31
SORL1-201ENST00000260197 SPDYE3A6NKU9 549 aa13.13□□□□□ -0.31
SORL1-201ENST00000260197 A6NNZ2 444 aa13.13□□□□□ -0.31
SORL1-201ENST00000260197 ALDH1L1O75891 902 aa13.13□□□□□ -0.31
SORL1-201ENST00000260197 TUBB8Q3ZCM7 444 aa13.13□□□□□ -0.31
SORL1-201ENST00000260197 LRRC2Q9BYS8 371 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms