RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 PLBD2Q8NHP8 589 aa5.49□□□□□ -1.53
USP44-201ENST00000258499 TDRD7Q8NHU6 1098 aaKnown RBP5.49□□□□□ -1.53
USP44-201ENST00000258499 XPO4Q9C0E2 1151 aaKnown RBP5.49□□□□□ -1.53
USP44-201ENST00000258499 PCDHA7Q9UN72 937 aa5.49□□□□□ -1.53
USP44-201ENST00000258499 IQSEC3Q9UPP2 1182 aaPredicted RBP5.49□□□□□ -1.53
USP44-201ENST00000258499 NRKQ7Z2Y5 1582 aa5.49□□□□□ -1.53
USP44-201ENST00000258499 PTPRUQ92729 1446 aa5.49□□□□□ -1.53
USP44-201ENST00000258499 KAT6BQ8WYB5 2073 aa5.49□□□□□ -1.53
USP44-201ENST00000258499 A0A0G2JLW4 131 aa5.49□□□□□ -1.53
USP44-201ENST00000258499 PFKFB2O60825 505 aa5.49□□□□□ -1.53
USP44-201ENST00000258499 PDIA3P30101 505 aaKnown RBP5.49□□□□□ -1.53
USP44-201ENST00000258499 ZAP70P43403 619 aa5.49□□□□□ -1.53
USP44-201ENST00000258499 TEX35Q5T0J7 233 aa5.49□□□□□ -1.53
USP44-201ENST00000258499 NAA16Q6N069 864 aaPredicted RBP5.49□□□□□ -1.53
USP44-201ENST00000258499 MPHOSPH8Q99549 860 aa5.49□□□□□ -1.53
USP44-201ENST00000258499 LLPHQ9BRT6 129 aaKnown RBP5.49□□□□□ -1.53
USP44-201ENST00000258499 HELLSQ9NRZ9 838 aa5.49□□□□□ -1.53
USP44-201ENST00000258499 TRMT112Q9UI30 125 aaKnown RBP5.49□□□□□ -1.53
USP44-201ENST00000258499 SLC12A7Q9Y666 1083 aa5.49□□□□□ -1.53
USP44-201ENST00000258499 CLIC4Q9Y696 253 aa5.49□□□□□ -1.53
USP44-201ENST00000258499 KIF20BQ96Q89 1820 aa5.48□□□□□ -1.53
USP44-201ENST00000258499 B4E1Z4 1266 aa5.48□□□□□ -1.53
USP44-201ENST00000258499 ZNF202O95125 648 aa5.48□□□□□ -1.53
USP44-201ENST00000258499 SLU7O95391 586 aaKnown RBP5.48□□□□□ -1.53
USP44-201ENST00000258499 ADORA1P30542 326 aa5.48□□□□□ -1.53
USP44-201ENST00000258499 ADD1P35611 737 aaKnown RBP5.48□□□□□ -1.53
USP44-201ENST00000258499 DPCR1Q3MIW9 517 aa5.48□□□□□ -1.53
USP44-201ENST00000258499 STOX1Q6ZVD7 989 aa5.48□□□□□ -1.53
USP44-201ENST00000258499 XAGE2Q96GT9 111 aa5.48□□□□□ -1.53
USP44-201ENST00000258499 ZKSCAN3Q9BRR0 538 aa5.48□□□□□ -1.53
USP44-201ENST00000258499 SPTLC3Q9NUV7 552 aa5.48□□□□□ -1.53
USP44-201ENST00000258499 CLTCQ00610 1675 aaKnown RBP5.48□□□□□ -1.53
USP44-201ENST00000258499 USP27XA6NNY8 438 aa5.48□□□□□ -1.53
USP44-201ENST00000258499 GPAA1O43292 621 aa5.48□□□□□ -1.53
USP44-201ENST00000258499 CBFA2T2O43439 604 aa5.48□□□□□ -1.53
USP44-201ENST00000258499 TPM1P09493 284 aa5.48□□□□□ -1.53
USP44-201ENST00000258499 ZCRB1Q8TBF4 217 aaKnown RBP5.48□□□□□ -1.53
USP44-201ENST00000258499 FUCA2Q9BTY2 467 aa5.48□□□□□ -1.53
USP44-201ENST00000258499 GOLPH3LQ9H4A5 285 aa5.48□□□□□ -1.53
USP44-201ENST00000258499 TMOD3Q9NYL9 352 aa5.48□□□□□ -1.53
USP44-201ENST00000258499 LRP2BPQ9P2M1 347 aa5.48□□□□□ -1.53
USP44-201ENST00000258499 KIF2AO00139 706 aaPredicted RBP5.48□□□□□ -1.53
USP44-201ENST00000258499 ZBTB43O43298 467 aa5.48□□□□□ -1.53
USP44-201ENST00000258499 FGAP02671 866 aa5.48□□□□□ -1.53
USP44-201ENST00000258499 GNG11P61952 73 aa5.48□□□□□ -1.53
USP44-201ENST00000258499 ANO1Q5XXA6 986 aa5.48□□□□□ -1.53
USP44-201ENST00000258499 CCDC102BQ68D86 513 aa5.48□□□□□ -1.53
USP44-201ENST00000258499 TMCO3Q6UWJ1 677 aa5.48□□□□□ -1.53
USP44-201ENST00000258499 ZNF710Q8N1W2 664 aa5.48□□□□□ -1.53
USP44-201ENST00000258499 AIFM3Q96NN9 605 aa5.48□□□□□ -1.53
USP44-201ENST00000258499 UBAC1Q9BSL1 405 aa5.48□□□□□ -1.53
USP44-201ENST00000258499 UTP14AQ9BVJ6 771 aaKnown RBP5.48□□□□□ -1.53
USP44-201ENST00000258499 MAST3O60307 1309 aa5.47□□□□□ -1.53
USP44-201ENST00000258499 USP42Q9H9J4 1324 aaKnown RBP5.47□□□□□ -1.53
USP44-201ENST00000258499 GOLGA8FQ08AF8 430 aa5.47□□□□□ -1.53
USP44-201ENST00000258499 GOLGA8DPQ0D2H9 430 aa5.47□□□□□ -1.53
USP44-201ENST00000258499 ARHGAP29Q52LW3 1261 aa5.47□□□□□ -1.53
USP44-201ENST00000258499 MYSM1Q5VVJ2 828 aa5.47□□□□□ -1.53
USP44-201ENST00000258499 KRT222Q8N1A0 295 aa5.47□□□□□ -1.53
USP44-201ENST00000258499 CCDC150Q8NCX0 1101 aa5.47□□□□□ -1.53
USP44-201ENST00000258499 OSBP2Q969R2 916 aa5.47□□□□□ -1.53
USP44-201ENST00000258499 KIAA1468Q9P260 1216 aa5.47□□□□□ -1.53
USP44-201ENST00000258499 RCOR1Q9UKL0 485 aa5.47□□□□□ -1.53
USP44-201ENST00000258499 TECPR2O15040 1411 aa5.47□□□□□ -1.53
USP44-201ENST00000258499 ERBB3P21860 1342 aa5.47□□□□□ -1.53
USP44-201ENST00000258499 ANKRD18BA2A2Z9 1011 aa5.47□□□□□ -1.53
USP44-201ENST00000258499 M0R2C6 588 aa5.47□□□□□ -1.53
USP44-201ENST00000258499 CCP110O43303 1012 aa5.47□□□□□ -1.53
USP44-201ENST00000258499 FANCCQ00597 558 aa5.47□□□□□ -1.53
USP44-201ENST00000258499 NCBP1Q09161 790 aaKnown RBP5.47□□□□□ -1.53
USP44-201ENST00000258499 ERCC6LQ2NKX8 1250 aa5.47□□□□□ -1.53
USP44-201ENST00000258499 DSCC1Q9BVC3 393 aa5.47□□□□□ -1.53
USP44-201ENST00000258499 NACAP1Q9BZK3 213 aa5.47□□□□□ -1.53
USP44-201ENST00000258499 CEMIPQ8WUJ3 1361 aa5.47□□□□□ -1.53
USP44-201ENST00000258499 STARD3NLO95772 234 aa5.47□□□□□ -1.53
USP44-201ENST00000258499 ZFYP08048 801 aaPredicted RBP5.47□□□□□ -1.53
USP44-201ENST00000258499 PFKFB1P16118 471 aa5.47□□□□□ -1.53
USP44-201ENST00000258499 AFMP43652 599 aa5.47□□□□□ -1.53
USP44-201ENST00000258499 SSRP1Q08945 709 aaKnown RBP5.47□□□□□ -1.53
USP44-201ENST00000258499 SKIDA1Q1XH10 827 aa5.47□□□□□ -1.53
USP44-201ENST00000258499 ADALQ6DHV7 355 aa5.47□□□□□ -1.53
USP44-201ENST00000258499 PPFIBP1Q86W92 1011 aa5.47□□□□□ -1.53
USP44-201ENST00000258499 ZNF397Q8NF99 534 aaPredicted RBP5.47□□□□□ -1.53
USP44-201ENST00000258499 CLIC6Q96NY7 704 aa5.47□□□□□ -1.53
USP44-201ENST00000258499 OGFRQ9NZT2 677 aa5.47□□□□□ -1.53
USP44-201ENST00000258499 KNDC1Q76NI1 1749 aa5.47□□□□□ -1.53
USP44-201ENST00000258499 FXR2P51116 673 aaKnown RBP eCLIP5.46□□□□□ -1.53
USP44-201ENST00000258499 STX17P56962 302 aa5.46□□□□□ -1.53
USP44-201ENST00000258499 PNOCQ13519 176 aa5.46□□□□□ -1.53
USP44-201ENST00000258499 KARSQ15046 597 aaKnown RBP5.46□□□□□ -1.53
USP44-201ENST00000258499 SLC4A8Q2Y0W8 1093 aa5.46□□□□□ -1.53
USP44-201ENST00000258499 ZMYM1Q5SVZ6 1142 aa5.46□□□□□ -1.53
USP44-201ENST00000258499 CMTR1Q8N1G2 835 aaKnown RBP5.46□□□□□ -1.53
USP44-201ENST00000258499 MIGA1Q8NAN2 632 aa5.46□□□□□ -1.53
USP44-201ENST00000258499 APPBP2Q92624 585 aa5.46□□□□□ -1.53
USP44-201ENST00000258499 MRFAP1L1Q96HT8 127 aa5.46□□□□□ -1.53
USP44-201ENST00000258499 PCMTD1Q96MG8 357 aaPredicted RBP5.46□□□□□ -1.53
USP44-201ENST00000258499 FEZ1Q99689 392 aa5.46□□□□□ -1.53
USP44-201ENST00000258499 RAI14Q9P0K7 980 aa5.46□□□□□ -1.53
USP44-201ENST00000258499 CARMIL3Q8ND23 1372 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms