RNA–Protein interactions for RNA: ENST00000258418.9

CAB39-201, Transcript of calcium binding protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAB39, Length 3,826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-201ENST00000258418 TPM3P06753 285 aa17.08■□□□□ 0.33
CAB39-201ENST00000258418 SKILP12757 684 aa17.08■□□□□ 0.33
CAB39-201ENST00000258418 TCIRG1Q13488 830 aa17.08■□□□□ 0.33
CAB39-201ENST00000258418 DCAF8Q5TAQ9 597 aa17.08■□□□□ 0.33
CAB39-201ENST00000258418 RIMS1Q86UR5 1692 aaKnown RBP17.08■□□□□ 0.32
CAB39-201ENST00000258418 TECPR2O15040 1411 aa17.08■□□□□ 0.32
CAB39-201ENST00000258418 NPHP4O75161 1426 aaPredicted RBP17.08■□□□□ 0.32
CAB39-201ENST00000258418 MTX1Q13505 466 aa17.08■□□□□ 0.32
CAB39-201ENST00000258418 MFSD6Q6ZSS7 791 aa17.08■□□□□ 0.32
CAB39-201ENST00000258418 PCMTD1Q96MG8 357 aaPredicted RBP17.08■□□□□ 0.32
CAB39-201ENST00000258418 PUS7LQ9H0K6 701 aaKnown RBP17.08■□□□□ 0.32
CAB39-201ENST00000258418 SPATA31D1Q6ZQQ2 1576 aa17.08■□□□□ 0.32
CAB39-201ENST00000258418 PHKA1P46020 1223 aa17.08■□□□□ 0.32
CAB39-201ENST00000258418 SCARF1Q14162 830 aa17.08■□□□□ 0.32
CAB39-201ENST00000258418 PTPN14Q15678 1187 aa17.08■□□□□ 0.32
CAB39-201ENST00000258418 SMIM5Q71RC9 77 aa17.08■□□□□ 0.32
CAB39-201ENST00000258418 PDCL2Q8N4E4 241 aa17.08■□□□□ 0.32
CAB39-201ENST00000258418 HLFQ16534 295 aa17.07■□□□□ 0.32
CAB39-201ENST00000258418 SFPQP23246 707 aaKnown RBP eCLIP17.07■□□□□ 0.32
CAB39-201ENST00000258418 SYKP43405 635 aa17.07■□□□□ 0.32
CAB39-201ENST00000258418 AFMP43652 599 aa17.07■□□□□ 0.32
CAB39-201ENST00000258418 ATP2B2Q01814 1243 aa17.07■□□□□ 0.32
CAB39-201ENST00000258418 MNS1Q8NEH6 495 aa17.07■□□□□ 0.32
CAB39-201ENST00000258418 RPAP1Q9BWH6 1393 aaPredicted RBP17.07■□□□□ 0.32
CAB39-201ENST00000258418 ZNF532Q9HCE3 1301 aa17.07■□□□□ 0.32
CAB39-201ENST00000258418 CDKL5O76039 1030 aa17.07■□□□□ 0.32
CAB39-201ENST00000258418 HELLSQ9NRZ9 838 aa17.07■□□□□ 0.32
CAB39-201ENST00000258418 SSRP1Q08945 709 aaKnown RBP17.06■□□□□ 0.32
CAB39-201ENST00000258418 STOX1Q6ZVD7 989 aa17.06■□□□□ 0.32
CAB39-201ENST00000258418 ZNF771Q7L3S4 317 aaPredicted RBP17.06■□□□□ 0.32
CAB39-201ENST00000258418 KCNJ14Q9UNX9 436 aa17.06■□□□□ 0.32
CAB39-201ENST00000258418 IFNKQ9P0W0 207 aa17.06■□□□□ 0.32
CAB39-201ENST00000258418 DIP2AQ14689 1571 aa17.06■□□□□ 0.32
CAB39-201ENST00000258418 PPP4R3BQ5MIZ7 849 aa17.06■□□□□ 0.32
CAB39-201ENST00000258418 APPBP2Q92624 585 aa17.06■□□□□ 0.32
CAB39-201ENST00000258418 CLSTN2Q9H4D0 955 aa17.06■□□□□ 0.32
CAB39-201ENST00000258418 PDIA3P30101 505 aaKnown RBP17.05■□□□□ 0.32
CAB39-201ENST00000258418 CLEC17AQ6ZS10 378 aa17.05■□□□□ 0.32
CAB39-201ENST00000258418 MRVI1Q9Y6F6 885 aa17.05■□□□□ 0.32
CAB39-201ENST00000258418 AGLP35573 1532 aa17.05■□□□□ 0.32
CAB39-201ENST00000258418 ARID5BQ14865 1188 aa17.05■□□□□ 0.32
CAB39-201ENST00000258418 HS1BP3Q53T59 392 aa17.05■□□□□ 0.32
CAB39-201ENST00000258418 FAM182BQ5T319 152 aa17.05■□□□□ 0.32
CAB39-201ENST00000258418 NSUN7Q8NE18 718 aaKnown RBP17.05■□□□□ 0.32
CAB39-201ENST00000258418 SEC31BQ9NQW1 1179 aa17.05■□□□□ 0.32
CAB39-201ENST00000258418 GNL3LQ9NVN8 582 aaKnown RBP17.05■□□□□ 0.32
CAB39-201ENST00000258418 ZSWIM4Q9H7M6 989 aa17.04■□□□□ 0.32
CAB39-201ENST00000258418 HOOK1Q9UJC3 728 aaKnown RBP17.04■□□□□ 0.32
CAB39-201ENST00000258418 CLIC4Q9Y696 253 aa17.04■□□□□ 0.32
CAB39-201ENST00000258418 CEMIPQ8WUJ3 1361 aa17.04■□□□□ 0.32
CAB39-201ENST00000258418 STX17P56962 302 aa17.04■□□□□ 0.32
CAB39-201ENST00000258418 PXDNQ92626 1479 aa17.04■□□□□ 0.32
CAB39-201ENST00000258418 ZFYP08048 801 aaPredicted RBP17.04■□□□□ 0.32
CAB39-201ENST00000258418 XBP1P17861 261 aa17.04■□□□□ 0.32
CAB39-201ENST00000258418 PGBD1Q96JS3 809 aa17.04■□□□□ 0.32
CAB39-201ENST00000258418 WTAPQ15007 396 aa17.03■□□□□ 0.32
CAB39-201ENST00000258418 STAMQ92783 540 aa17.03■□□□□ 0.32
CAB39-201ENST00000258418 BCAMP50895 628 aa17.03■□□□□ 0.32
CAB39-201ENST00000258418 C11orf57Q6ZUT1 292 aaPredicted RBP17.03■□□□□ 0.32
CAB39-201ENST00000258418 PIGBQ92521 554 aa17.03■□□□□ 0.32
CAB39-201ENST00000258418 NOL10Q9BSC4 688 aaKnown RBP17.03■□□□□ 0.32
CAB39-201ENST00000258418 ANKARQ7Z5J8 1434 aa17.03■□□□□ 0.32
CAB39-201ENST00000258418 RIOK3O14730 519 aaKnown RBP17.03■□□□□ 0.32
CAB39-201ENST00000258418 CLIC6Q96NY7 704 aa17.03■□□□□ 0.32
CAB39-201ENST00000258418 DDB1Q16531 1140 aa17.02■□□□□ 0.32
CAB39-201ENST00000258418 SDR42E1Q8WUS8 393 aa17.02■□□□□ 0.32
CAB39-201ENST00000258418 TEX13AQ9BXU3 409 aaPredicted RBP17.02■□□□□ 0.32
CAB39-201ENST00000258418 WWC3Q9ULE0 1092 aa17.02■□□□□ 0.32
CAB39-201ENST00000258418 DENND2AQ9ULE3 1009 aa17.02■□□□□ 0.32
CAB39-201ENST00000258418 PRKAB2O43741 272 aa17.02■□□□□ 0.31
CAB39-201ENST00000258418 ZMYM1Q5SVZ6 1142 aa17.02■□□□□ 0.31
CAB39-201ENST00000258418 ZNF335Q9H4Z2 1342 aaPredicted RBP17.02■□□□□ 0.31
CAB39-201ENST00000258418 CTAGE5O15320 804 aa17.01■□□□□ 0.31
CAB39-201ENST00000258418 URI1O94763 535 aaPredicted RBP17.01■□□□□ 0.31
CAB39-201ENST00000258418 ZNF75DP51815 510 aa17.01■□□□□ 0.31
CAB39-201ENST00000258418 FAM160A1Q05DH4 1040 aa17.01■□□□□ 0.31
CAB39-201ENST00000258418 VAT1LQ9HCJ6 419 aa17.01■□□□□ 0.31
CAB39-201ENST00000258418 RTN1Q16799 776 aa17.01■□□□□ 0.31
CAB39-201ENST00000258418 CCDC102BQ68D86 513 aa17.01■□□□□ 0.31
CAB39-201ENST00000258418 BRINP3Q76B58 766 aa17.01■□□□□ 0.31
CAB39-201ENST00000258418 BRMS1Q9HCU9 246 aa17.01■□□□□ 0.31
CAB39-201ENST00000258418 ANKIB1Q9P2G1 1089 aa17.01■□□□□ 0.31
CAB39-201ENST00000258418 PCDHA7Q9UN72 937 aa17.01■□□□□ 0.31
CAB39-201ENST00000258418 PDIA4P13667 645 aaKnown RBP17.01■□□□□ 0.31
CAB39-201ENST00000258418 TTF1Q15361 905 aaPredicted RBP17.01■□□□□ 0.31
CAB39-201ENST00000258418 CAVIN4Q5BKX8 364 aa17.01■□□□□ 0.31
CAB39-201ENST00000258418 TFCP2L1Q9NZI6 479 aa17.01■□□□□ 0.31
CAB39-201ENST00000258418 PFKFB2O60825 505 aa17■□□□□ 0.31
CAB39-201ENST00000258418 NDUFA8P51970 172 aa17■□□□□ 0.31
CAB39-201ENST00000258418 ZNF827Q17R98 1081 aa17■□□□□ 0.31
CAB39-201ENST00000258418 ADGRL3Q9HAR2 1447 aa17■□□□□ 0.31
CAB39-201ENST00000258418 ANGEL1Q9UNK9 670 aaKnown RBP17■□□□□ 0.31
CAB39-201ENST00000258418 ITSN1Q15811 1721 aa17■□□□□ 0.31
CAB39-201ENST00000258418 H7C1W4 665 aa17■□□□□ 0.31
CAB39-201ENST00000258418 DYNC1I1O14576 645 aa17■□□□□ 0.31
CAB39-201ENST00000258418 KRT40Q6A162 431 aa17■□□□□ 0.31
CAB39-201ENST00000258418 NGLY1Q96IV0 654 aa17■□□□□ 0.31
CAB39-201ENST00000258418 PLIN2Q99541 437 aa17■□□□□ 0.31
CAB39-201ENST00000258418 DSCC1Q9BVC3 393 aa17■□□□□ 0.31
CAB39-201ENST00000258418 HEG1Q9ULI3 1381 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms