RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 BICD2Q8TD16 824 aa13.2□□□□□ -0.3
PDE6B-201ENST00000255622 SH3TC1Q8TE82 1336 aa13.2□□□□□ -0.3
PDE6B-201ENST00000255622 SSR1P43307 286 aaKnown RBP13.2□□□□□ -0.3
PDE6B-201ENST00000255622 C10orf67Q8IYJ2 551 aa13.2□□□□□ -0.3
PDE6B-201ENST00000255622 NOL10Q9BSC4 688 aaKnown RBP13.2□□□□□ -0.3
PDE6B-201ENST00000255622 TJP1Q07157 1748 aa13.2□□□□□ -0.3
PDE6B-201ENST00000255622 SPATA31A3Q5VYP0 1347 aa13.19□□□□□ -0.3
PDE6B-201ENST00000255622 CTDNEP1O95476 244 aa13.19□□□□□ -0.3
PDE6B-201ENST00000255622 TTLL5Q6EMB2 1281 aa13.19□□□□□ -0.3
PDE6B-201ENST00000255622 TOM1L2Q6ZVM7 507 aa13.19□□□□□ -0.3
PDE6B-201ENST00000255622 FAM200AQ8TCP9 573 aa13.19□□□□□ -0.3
PDE6B-201ENST00000255622 RASSF4Q9H2L5 321 aa13.19□□□□□ -0.3
PDE6B-201ENST00000255622 PYCARDQ9ULZ3 195 aa13.19□□□□□ -0.3
PDE6B-201ENST00000255622 A0A1B0GUL7 405 aa13.19□□□□□ -0.3
PDE6B-201ENST00000255622 RFX7Q2KHR2 1363 aa13.18□□□□□ -0.3
PDE6B-201ENST00000255622 MAST3O60307 1309 aa13.18□□□□□ -0.3
PDE6B-201ENST00000255622 M0R2C6 588 aa13.18□□□□□ -0.3
PDE6B-201ENST00000255622 HSPD1P10809 573 aaKnown RBP13.18□□□□□ -0.3
PDE6B-201ENST00000255622 GUCY1B3Q02153 619 aa13.18□□□□□ -0.3
PDE6B-201ENST00000255622 ZCRB1Q8TBF4 217 aaKnown RBP13.18□□□□□ -0.3
PDE6B-201ENST00000255622 CBX8Q9HC52 389 aa13.18□□□□□ -0.3
PDE6B-201ENST00000255622 GPHNQ9NQX3 736 aaPredicted RBP13.18□□□□□ -0.3
PDE6B-201ENST00000255622 PALLDQ8WX93 1383 aa13.18□□□□□ -0.3
PDE6B-201ENST00000255622 NUP188Q5SRE5 1749 aa13.18□□□□□ -0.3
PDE6B-201ENST00000255622 IFIT1P09914 478 aaKnown RBP13.18□□□□□ -0.3
PDE6B-201ENST00000255622 NOP2P46087 812 aaKnown RBP13.18□□□□□ -0.3
PDE6B-201ENST00000255622 FKBP4Q02790 459 aaKnown RBP eCLIP13.18□□□□□ -0.3
PDE6B-201ENST00000255622 NSUN7Q8NE18 718 aaKnown RBP13.18□□□□□ -0.3
PDE6B-201ENST00000255622 OGFRQ9NZT2 677 aa13.18□□□□□ -0.3
PDE6B-201ENST00000255622 PTPDC1A2A3K4 754 aa13.17□□□□□ -0.3
PDE6B-201ENST00000255622 E7EWF7 191 aa13.17□□□□□ -0.3
PDE6B-201ENST00000255622 SETQ01105 290 aaPredicted RBP13.17□□□□□ -0.3
PDE6B-201ENST00000255622 DHX32Q7L7V1 743 aaKnown RBP13.17□□□□□ -0.3
PDE6B-201ENST00000255622 PRDM11Q9NQV5 511 aa13.17□□□□□ -0.3
PDE6B-201ENST00000255622 A0A087WWV3 80 aa13.17□□□□□ -0.3
PDE6B-201ENST00000255622 EYA2O00167 538 aa13.17□□□□□ -0.3
PDE6B-201ENST00000255622 ADORA1P30542 326 aa13.17□□□□□ -0.3
PDE6B-201ENST00000255622 ZMYM1Q5SVZ6 1142 aa13.17□□□□□ -0.3
PDE6B-201ENST00000255622 CLSTN2Q9H4D0 955 aa13.17□□□□□ -0.3
PDE6B-201ENST00000255622 PFKFB2O60825 505 aa13.17□□□□□ -0.3
PDE6B-201ENST00000255622 IL15P40933 162 aaPredicted RBP13.17□□□□□ -0.3
PDE6B-201ENST00000255622 RAD51AP2Q09MP3 1159 aa13.17□□□□□ -0.3
PDE6B-201ENST00000255622 NBPF11Q86T75 865 aa13.17□□□□□ -0.3
PDE6B-201ENST00000255622 SMARCC2Q8TAQ2 1214 aa13.17□□□□□ -0.3
PDE6B-201ENST00000255622 DNAJC25Q9H1X3 360 aa13.17□□□□□ -0.3
PDE6B-201ENST00000255622 SUFUQ9UMX1 484 aa13.17□□□□□ -0.3
PDE6B-201ENST00000255622 PCDH11XQ9BZA7 1347 aa13.16□□□□□ -0.3
PDE6B-201ENST00000255622 PCDH11YQ9BZA8 1340 aa13.16□□□□□ -0.3
PDE6B-201ENST00000255622 ABCC6O95255 1503 aa13.16□□□□□ -0.3
PDE6B-201ENST00000255622 KCPQ6ZWJ8 1503 aa13.16□□□□□ -0.3
PDE6B-201ENST00000255622 TTC36A6NLP5 189 aa13.16□□□□□ -0.3
PDE6B-201ENST00000255622 PTGS1P23219 599 aa13.16□□□□□ -0.3
PDE6B-201ENST00000255622 HNRNPH2P55795 449 aaKnown RBP13.16□□□□□ -0.3
PDE6B-201ENST00000255622 HAND2P61296 217 aa13.16□□□□□ -0.3
PDE6B-201ENST00000255622 PPP2R5AQ15172 486 aa13.16□□□□□ -0.3
PDE6B-201ENST00000255622 HELLSQ9NRZ9 838 aa13.16□□□□□ -0.3
PDE6B-201ENST00000255622 ADD1P35611 737 aaKnown RBP13.16□□□□□ -0.3
PDE6B-201ENST00000255622 HMGN5P82970 282 aaKnown RBP13.16□□□□□ -0.3
PDE6B-201ENST00000255622 EXOSC10Q01780 885 aaKnown RBP13.16□□□□□ -0.3
PDE6B-201ENST00000255622 TERF2Q15554 542 aa13.16□□□□□ -0.3
PDE6B-201ENST00000255622 LRCH2Q5VUJ6 765 aa13.16□□□□□ -0.3
PDE6B-201ENST00000255622 PI16Q6UXB8 463 aa13.16□□□□□ -0.3
PDE6B-201ENST00000255622 OSBP2Q969R2 916 aa13.16□□□□□ -0.3
PDE6B-201ENST00000255622 SCARF1Q14162 830 aa13.15□□□□□ -0.3
PDE6B-201ENST00000255622 ARMCX6Q7L4S7 300 aa13.15□□□□□ -0.3
PDE6B-201ENST00000255622 CADPS2Q86UW7 1296 aa13.15□□□□□ -0.3
PDE6B-201ENST00000255622 DDX19AQ9NUU7 478 aaKnown RBP13.15□□□□□ -0.3
PDE6B-201ENST00000255622 NRBP1Q9UHY1 535 aa13.15□□□□□ -0.3
PDE6B-201ENST00000255622 CPDO75976 1380 aa13.15□□□□□ -0.3
PDE6B-201ENST00000255622 RAB11FIP4Q86YS3 637 aa13.15□□□□□ -0.3
PDE6B-201ENST00000255622 SYNE4Q8N205 404 aa13.15□□□□□ -0.3
PDE6B-201ENST00000255622 DSCC1Q9BVC3 393 aa13.15□□□□□ -0.3
PDE6B-201ENST00000255622 STRN4Q9NRL3 753 aa13.15□□□□□ -0.3
PDE6B-201ENST00000255622 WDR17Q8IZU2 1322 aa13.15□□□□□ -0.3
PDE6B-201ENST00000255622 PARP4Q9UKK3 1724 aaKnown RBP13.15□□□□□ -0.3
PDE6B-201ENST00000255622 RNF113AO15541 343 aaKnown RBP13.15□□□□□ -0.3
PDE6B-201ENST00000255622 E2F4Q16254 413 aa13.15□□□□□ -0.3
PDE6B-201ENST00000255622 CCDC191Q8NCU4 936 aa13.15□□□□□ -0.3
PDE6B-201ENST00000255622 FAM89AQ96GI7 184 aa13.15□□□□□ -0.3
PDE6B-201ENST00000255622 GOLPH3LQ9H4A5 285 aa13.15□□□□□ -0.3
PDE6B-201ENST00000255622 FOXP2O15409 715 aa13.14□□□□□ -0.31
PDE6B-201ENST00000255622 HSPA2P54652 639 aa13.14□□□□□ -0.31
PDE6B-201ENST00000255622 RBM43Q6ZSC3 357 aaKnown RBP13.14□□□□□ -0.31
PDE6B-201ENST00000255622 ERCC4Q92889 916 aaPredicted RBP13.14□□□□□ -0.31
PDE6B-201ENST00000255622 SPTLC3Q9NUV7 552 aa13.14□□□□□ -0.31
PDE6B-201ENST00000255622 UBR2Q8IWV8 1755 aa13.14□□□□□ -0.31
PDE6B-201ENST00000255622 PDIA3P30101 505 aaKnown RBP13.14□□□□□ -0.31
PDE6B-201ENST00000255622 LRMPQ12912 555 aa13.14□□□□□ -0.31
PDE6B-201ENST00000255622 KIAA1524Q8TCG1 905 aa13.14□□□□□ -0.31
PDE6B-201ENST00000255622 USP28Q96RU2 1077 aa13.14□□□□□ -0.31
PDE6B-201ENST00000255622 OTUD7BQ6GQQ9 843 aa13.14□□□□□ -0.31
PDE6B-201ENST00000255622 BRINP3Q76B58 766 aa13.14□□□□□ -0.31
PDE6B-201ENST00000255622 ILDR1Q86SU0 546 aaPredicted RBP13.14□□□□□ -0.31
PDE6B-201ENST00000255622 FEZ1Q99689 392 aa13.14□□□□□ -0.31
PDE6B-201ENST00000255622 ZSCAN16Q9H4T2 348 aaPredicted RBP13.14□□□□□ -0.31
PDE6B-201ENST00000255622 ZNF165P49910 485 aa13.13□□□□□ -0.31
PDE6B-201ENST00000255622 WASHC4Q2M389 1173 aa13.13□□□□□ -0.31
PDE6B-201ENST00000255622 GPR108Q9NPR9 543 aa13.13□□□□□ -0.31
PDE6B-201ENST00000255622 GOLGA6L6A8MZA4 724 aa13.13□□□□□ -0.31
PDE6B-201ENST00000255622 GUCY2CP25092 1073 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms