RNA–Protein interactions for RNA: ENST00000249269.8

PMPCB-201, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCB, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-201ENST00000249269 CEMIPQ8WUJ3 1361 aa17.4■□□□□ 0.38
PMPCB-201ENST00000249269 GABPB1Q06547 395 aaPredicted RBP17.4■□□□□ 0.38
PMPCB-201ENST00000249269 RASA3Q14644 834 aa17.4■□□□□ 0.38
PMPCB-201ENST00000249269 RASEFQ8IZ41 740 aa17.4■□□□□ 0.38
PMPCB-201ENST00000249269 PDILTQ8N807 584 aa17.4■□□□□ 0.38
PMPCB-201ENST00000249269 NEUROD6Q96NK8 337 aa17.4■□□□□ 0.38
PMPCB-201ENST00000249269 OVOS2A0A0G2JMS6 1433 aa17.4■□□□□ 0.38
PMPCB-201ENST00000249269 NWD1Q149M9 1564 aa17.39■□□□□ 0.38
PMPCB-201ENST00000249269 DIP2BQ9P265 1576 aa17.39■□□□□ 0.38
PMPCB-201ENST00000249269 SLIT1O75093 1534 aa17.39■□□□□ 0.37
PMPCB-201ENST00000249269 CCP110O43303 1012 aa17.39■□□□□ 0.37
PMPCB-201ENST00000249269 KCNA2P16389 499 aa17.39■□□□□ 0.37
PMPCB-201ENST00000249269 DNM1Q05193 864 aaKnown RBP17.39■□□□□ 0.37
PMPCB-201ENST00000249269 HSP90B2PQ58FF3 399 aa17.39■□□□□ 0.37
PMPCB-201ENST00000249269 SARM1Q6SZW1 724 aa17.39■□□□□ 0.37
PMPCB-201ENST00000249269 SRGAP3O43295 1099 aa17.39■□□□□ 0.37
PMPCB-201ENST00000249269 PLA2G4DQ86XP0 818 aa17.39■□□□□ 0.37
PMPCB-201ENST00000249269 KDM3BQ7LBC6 1761 aa17.38■□□□□ 0.37
PMPCB-201ENST00000249269 RFX7Q2KHR2 1363 aa17.38■□□□□ 0.37
PMPCB-201ENST00000249269 TUBB4AP04350 444 aa17.38■□□□□ 0.37
PMPCB-201ENST00000249269 TCF3P15923 654 aa17.38■□□□□ 0.37
PMPCB-201ENST00000249269 TYRO3Q06418 890 aa17.38■□□□□ 0.37
PMPCB-201ENST00000249269 IL25Q9H293 177 aa17.38■□□□□ 0.37
PMPCB-201ENST00000249269 JCADQ9P266 1359 aa17.38■□□□□ 0.37
PMPCB-201ENST00000249269 OATP04181 439 aa17.38■□□□□ 0.37
PMPCB-201ENST00000249269 TRPC1P48995 793 aa17.38■□□□□ 0.37
PMPCB-201ENST00000249269 AMPHP49418 695 aa17.38■□□□□ 0.37
PMPCB-201ENST00000249269 ATL3Q6DD88 541 aa17.38■□□□□ 0.37
PMPCB-201ENST00000249269 NUTM1Q86Y26 1132 aa17.38■□□□□ 0.37
PMPCB-201ENST00000249269 UBXN4Q92575 508 aa17.38■□□□□ 0.37
PMPCB-201ENST00000249269 MAP4K1Q92918 833 aa17.38■□□□□ 0.37
PMPCB-201ENST00000249269 PAGR1Q9BTK6 254 aa17.38■□□□□ 0.37
PMPCB-201ENST00000249269 CLSTN2Q9H4D0 955 aa17.38■□□□□ 0.37
PMPCB-201ENST00000249269 MIS18AQ9NYP9 233 aa17.38■□□□□ 0.37
PMPCB-201ENST00000249269 LMTK3Q96Q04 1460 aa17.38■□□□□ 0.37
PMPCB-201ENST00000249269 TNRQ92752 1358 aa17.37■□□□□ 0.37
PMPCB-201ENST00000249269 KIF2AO00139 706 aaPredicted RBP17.37■□□□□ 0.37
PMPCB-201ENST00000249269 KRT32Q14532 448 aa17.37■□□□□ 0.37
PMPCB-201ENST00000249269 ZSCAN26Q16670 478 aa17.37■□□□□ 0.37
PMPCB-201ENST00000249269 BEND3Q5T5X7 828 aa17.37■□□□□ 0.37
PMPCB-201ENST00000249269 JAKMIP1Q96N16 626 aaKnown RBP17.37■□□□□ 0.37
PMPCB-201ENST00000249269 TEX13AQ9BXU3 409 aaPredicted RBP17.37■□□□□ 0.37
PMPCB-201ENST00000249269 IL1RAPL2Q9NP60 686 aa17.37■□□□□ 0.37
PMPCB-201ENST00000249269 CCDC47Q96A33 483 aaKnown RBP17.37■□□□□ 0.37
PMPCB-201ENST00000249269 TNMDQ9H2S6 317 aa17.37■□□□□ 0.37
PMPCB-201ENST00000249269 TSPOAP1O95153 1857 aa17.36■□□□□ 0.37
PMPCB-201ENST00000249269 FOXO3O43524 673 aa17.36■□□□□ 0.37
PMPCB-201ENST00000249269 SETSIPP0DME0 302 aa17.36■□□□□ 0.37
PMPCB-201ENST00000249269 MAGEA8P43361 318 aa17.36■□□□□ 0.37
PMPCB-201ENST00000249269 CCDC83Q8IWF9 413 aa17.36■□□□□ 0.37
PMPCB-201ENST00000249269 DNAAF4Q8WXU2 420 aa17.36■□□□□ 0.37
PMPCB-201ENST00000249269 ZSCAN16Q9H4T2 348 aaPredicted RBP17.36■□□□□ 0.37
PMPCB-201ENST00000249269 IRAK4Q9NWZ3 460 aa17.36■□□□□ 0.37
PMPCB-201ENST00000249269 NCKAP5LQ9HCH0 1330 aa17.36■□□□□ 0.37
PMPCB-201ENST00000249269 PIK3C2AO00443 1686 aa17.36■□□□□ 0.37
PMPCB-201ENST00000249269 ONECUT3O60422 494 aaPredicted RBP17.36■□□□□ 0.37
PMPCB-201ENST00000249269 INHBEP58166 350 aa17.36■□□□□ 0.37
PMPCB-201ENST00000249269 TBC1D10BQ4KMP7 808 aaPredicted RBP17.36■□□□□ 0.37
PMPCB-201ENST00000249269 CWC27Q6UX04 472 aaKnown RBP17.36■□□□□ 0.37
PMPCB-201ENST00000249269 LARGE2Q8N3Y3 721 aa17.36■□□□□ 0.37
PMPCB-201ENST00000249269 FAM117AQ9C073 453 aa17.36■□□□□ 0.37
PMPCB-201ENST00000249269 PYCARDQ9ULZ3 195 aa17.36■□□□□ 0.37
PMPCB-201ENST00000249269 RBM47A0AV96 593 aaKnown RBP17.35■□□□□ 0.37
PMPCB-201ENST00000249269 BICDL2A1A5D9 508 aa17.35■□□□□ 0.37
PMPCB-201ENST00000249269 ANKRD18BA2A2Z9 1011 aa17.35■□□□□ 0.37
PMPCB-201ENST00000249269 GOLGA6L4A6NEF3 574 aa17.35■□□□□ 0.37
PMPCB-201ENST00000249269 A6NJR5 290 aa17.35■□□□□ 0.37
PMPCB-201ENST00000249269 ZNF75DP51815 510 aa17.35■□□□□ 0.37
PMPCB-201ENST00000249269 CDC37L1Q7L3B6 337 aa17.35■□□□□ 0.37
PMPCB-201ENST00000249269 MRFAP1L1Q96HT8 127 aa17.35■□□□□ 0.37
PMPCB-201ENST00000249269 SLX1AQ9BQ83 275 aa17.35■□□□□ 0.37
PMPCB-201ENST00000249269 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.35■□□□□ 0.374e-7■■□□□ 12.3
PMPCB-201ENST00000249269 NCAPD2Q15021 1401 aa17.34■□□□□ 0.37
PMPCB-201ENST00000249269 RBM6P78332 1123 aaKnown RBP17.34■□□□□ 0.37
PMPCB-201ENST00000249269 ZNF771Q7L3S4 317 aaPredicted RBP17.34■□□□□ 0.37
PMPCB-201ENST00000249269 TTC6Q86TZ1 520 aa17.34■□□□□ 0.37
PMPCB-201ENST00000249269 IL17REQ8NFR9 667 aa17.34■□□□□ 0.37
PMPCB-201ENST00000249269 AGAP3Q96P47 875 aa17.34■□□□□ 0.37
PMPCB-201ENST00000249269 DUSP9Q99956 384 aaKnown RBP17.34■□□□□ 0.37
PMPCB-201ENST00000249269 CFAP45Q9UL16 551 aa17.34■□□□□ 0.37
PMPCB-201ENST00000249269 AP5Z1O43299 807 aa17.33■□□□□ 0.37
PMPCB-201ENST00000249269 PPFIA2O75334 1257 aa17.33■□□□□ 0.37
PMPCB-201ENST00000249269 ME3Q16798 604 aa17.33■□□□□ 0.37
PMPCB-201ENST00000249269 TSNAXIP1Q2TAA8 658 aa17.33■□□□□ 0.37
PMPCB-201ENST00000249269 ZNF394Q53GI3 561 aa17.33■□□□□ 0.37
PMPCB-201ENST00000249269 UTP6Q9NYH9 597 aaKnown RBP17.33■□□□□ 0.37
PMPCB-201ENST00000249269 PPP2R5AQ15172 486 aa17.33■□□□□ 0.36
PMPCB-201ENST00000249269 SLFNL1Q499Z3 407 aa17.33■□□□□ 0.36
PMPCB-201ENST00000249269 CREB3L3Q68CJ9 461 aa17.33■□□□□ 0.36
PMPCB-201ENST00000249269 DPH6Q7L8W6 267 aa17.33■□□□□ 0.36
PMPCB-201ENST00000249269 TRIM74Q86UV6 250 aa17.33■□□□□ 0.36
PMPCB-201ENST00000249269 TRIM73Q86UV7 250 aa17.33■□□□□ 0.36
PMPCB-201ENST00000249269 VPS37AQ8NEZ2 397 aa17.33■□□□□ 0.36
PMPCB-201ENST00000249269 KIF5CO60282 957 aa17.32■□□□□ 0.36
PMPCB-201ENST00000249269 NBPF7P0C2Y1 421 aaPredicted RBP17.32■□□□□ 0.36
PMPCB-201ENST00000249269 MRC1P22897 1456 aa17.32■□□□□ 0.36
PMPCB-201ENST00000249269 LMO7Q8WWI1 1683 aa17.32■□□□□ 0.36
PMPCB-201ENST00000249269 UTYO14607 1347 aa17.32■□□□□ 0.36
PMPCB-201ENST00000249269 VPS37CA5D8V6 355 aaPredicted RBP17.32■□□□□ 0.36
PMPCB-201ENST00000249269 IFIT2P09913 472 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms