RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 RBSNQ9H1K0 784 aa15.6■□□□□ 0.09
TARDBP-201ENST00000240185 RBM8AQ9Y5S9 174 aaKnown RBP15.6■□□□□ 0.09
TARDBP-201ENST00000240185 ERICH3Q5RHP9 1530 aa15.6■□□□□ 0.09
TARDBP-201ENST00000240185 MYL5Q02045 173 aa15.59■□□□□ 0.09
TARDBP-201ENST00000240185 ZNF365Q70YC5 407 aa15.59■□□□□ 0.09
TARDBP-201ENST00000240185 ESYT1Q9BSJ8 1104 aa15.59■□□□□ 0.09
TARDBP-201ENST00000240185 TACC3Q9Y6A5 838 aa15.59■□□□□ 0.09
TARDBP-201ENST00000240185 TRIM75PA6NK02 468 aa15.59■□□□□ 0.09
TARDBP-201ENST00000240185 PTCD1O75127 700 aaKnown RBP15.59■□□□□ 0.09
TARDBP-201ENST00000240185 SEL1L2Q5TEA6 688 aa15.59■□□□□ 0.09
TARDBP-201ENST00000240185 PPP1R42Q7Z4L9 355 aa15.59■□□□□ 0.09
TARDBP-201ENST00000240185 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.59■□□□□ 0.09
TARDBP-201ENST00000240185 LRRC9Q6ZRR7 1453 aa15.59■□□□□ 0.09
TARDBP-201ENST00000240185 ACTN4O43707 911 aaKnown RBP15.59■□□□□ 0.09
TARDBP-201ENST00000240185 Q6ZUG5 572 aa15.59■□□□□ 0.09
TARDBP-201ENST00000240185 NUTM2AQ8IVF1 878 aaPredicted RBP15.59■□□□□ 0.09
TARDBP-201ENST00000240185 RTEL1-TNFRSF6BF6WH68 1400 aa15.58■□□□□ 0.09
TARDBP-201ENST00000240185 WDR78Q5VTH9 848 aa15.58■□□□□ 0.09
TARDBP-201ENST00000240185 PEX19P40855 299 aa15.58■□□□□ 0.09
TARDBP-201ENST00000240185 IRX5P78411 483 aaPredicted RBP15.58■□□□□ 0.09
TARDBP-201ENST00000240185 HDAC1Q13547 482 aaPredicted RBP15.58■□□□□ 0.09
TARDBP-201ENST00000240185 CCDC14Q49A88 953 aa15.58■□□□□ 0.09
TARDBP-201ENST00000240185 SH2D4BQ5SQS7 431 aa15.58■□□□□ 0.09
TARDBP-201ENST00000240185 ATAD2Q6PL18 1390 aa15.58■□□□□ 0.08
TARDBP-201ENST00000240185 MCM7P33993 719 aa15.58■□□□□ 0.08
TARDBP-201ENST00000240185 PPFIA1Q13136 1202 aa15.58■□□□□ 0.08
TARDBP-201ENST00000240185 RTN1Q16799 776 aa15.58■□□□□ 0.08
TARDBP-201ENST00000240185 WHAMMQ8TF30 809 aa15.58■□□□□ 0.08
TARDBP-201ENST00000240185 ANKIB1Q9P2G1 1089 aa15.58■□□□□ 0.08
TARDBP-201ENST00000240185 PPARDQ03181 441 aa15.58■□□□□ 0.08
TARDBP-201ENST00000240185 IFT20Q8IY31 132 aa15.58■□□□□ 0.08
TARDBP-201ENST00000240185 GSDMBQ8TAX9 411 aa15.58■□□□□ 0.08
TARDBP-201ENST00000240185 LEO1Q8WVC0 666 aaPredicted RBP15.58■□□□□ 0.08
TARDBP-201ENST00000240185 IMPG2Q9BZV3 1241 aa15.58■□□□□ 0.08
TARDBP-201ENST00000240185 FGD5Q6ZNL6 1462 aa15.58■□□□□ 0.08
TARDBP-201ENST00000240185 CETN3O15182 167 aa15.58■□□□□ 0.08
TARDBP-201ENST00000240185 SNX16P57768 344 aa15.58■□□□□ 0.08
TARDBP-201ENST00000240185 C17orf53Q8N3J3 647 aaPredicted RBP15.58■□□□□ 0.08
TARDBP-201ENST00000240185 TSPYL2Q9H2G4 693 aaPredicted RBP15.58■□□□□ 0.08
TARDBP-201ENST00000240185 RPAINQ86UA6 219 aa15.57■□□□□ 0.08
TARDBP-201ENST00000240185 USH1CQ9Y6N9 552 aa15.57■□□□□ 0.08
TARDBP-201ENST00000240185 CAPN7Q9Y6W3 813 aa15.57■□□□□ 0.08
TARDBP-201ENST00000240185 KIAA1107Q9UPP5 1409 aa15.57■□□□□ 0.08
TARDBP-201ENST00000240185 C8orf34Q49A92 452 aa15.57■□□□□ 0.08
TARDBP-201ENST00000240185 ZGPATQ8N5A5 531 aaKnown RBP15.57■□□□□ 0.08
TARDBP-201ENST00000240185 PFDN4Q9NQP4 134 aa15.57■□□□□ 0.08
TARDBP-201ENST00000240185 STX8Q9UNK0 236 aa15.57■□□□□ 0.08
TARDBP-201ENST00000240185 TTF2Q9UNY4 1162 aaKnown RBP15.57■□□□□ 0.08
TARDBP-201ENST00000240185 E7EVH7 732 aa15.57■□□□□ 0.08
TARDBP-201ENST00000240185 DBF4Q9UBU7 674 aaPredicted RBP15.57■□□□□ 0.08
TARDBP-201ENST00000240185 TMTC2Q8N394 836 aa15.57■□□□□ 0.08
TARDBP-201ENST00000240185 MRRFQ96E11 262 aaKnown RBP15.57■□□□□ 0.08
TARDBP-201ENST00000240185 SF3A3Q12874 501 aaKnown RBP eCLIP15.56■□□□□ 0.08
TARDBP-201ENST00000240185 GEN1Q17RS7 908 aa15.56■□□□□ 0.08
TARDBP-201ENST00000240185 RHPN1Q8TCX5 695 aa15.56■□□□□ 0.08
TARDBP-201ENST00000240185 RNASE9P60153 205 aaKnown RBP15.56■□□□□ 0.08
TARDBP-201ENST00000240185 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.56■□□□□ 0.08
TARDBP-201ENST00000240185 TAOK1Q7L7X3 1001 aa15.56■□□□□ 0.08
TARDBP-201ENST00000240185 SLF2Q8IX21 1173 aa15.56■□□□□ 0.08
TARDBP-201ENST00000240185 TRMT112Q9UI30 125 aaKnown RBP15.56■□□□□ 0.08
TARDBP-201ENST00000240185 SH3BP5O60239 455 aa15.56■□□□□ 0.08
TARDBP-201ENST00000240185 STMN1P16949 149 aa15.56■□□□□ 0.08
TARDBP-201ENST00000240185 PDE1AP54750 535 aa15.56■□□□□ 0.08
TARDBP-201ENST00000240185 SH3BGRP55822 239 aaPredicted RBP15.56■□□□□ 0.08
TARDBP-201ENST00000240185 IGSF22Q8N9C0 903 aa15.56■□□□□ 0.08
TARDBP-201ENST00000240185 ERCC5P28715 1186 aaPredicted RBP15.55■□□□□ 0.08
TARDBP-201ENST00000240185 MUM1Q2TAK8 710 aa15.55■□□□□ 0.08
TARDBP-201ENST00000240185 KRT23Q9C075 422 aa15.55■□□□□ 0.08
TARDBP-201ENST00000240185 ZNF652Q9Y2D9 606 aa15.55■□□□□ 0.08
TARDBP-201ENST00000240185 UTP11Q9Y3A2 253 aaKnown RBP15.55■□□□□ 0.08
TARDBP-201ENST00000240185 CCT6AP40227 531 aaKnown RBP15.55■□□□□ 0.08
TARDBP-201ENST00000240185 TRIM68Q6AZZ1 485 aa15.55■□□□□ 0.08
TARDBP-201ENST00000240185 CROCCP2Q86T23 111 aa15.55■□□□□ 0.08
TARDBP-201ENST00000240185 STK38LQ9Y2H1 464 aa15.55■□□□□ 0.08
TARDBP-201ENST00000240185 RAD54L2Q9Y4B4 1467 aa15.55■□□□□ 0.08
TARDBP-201ENST00000240185 RAPGEF1Q13905 1077 aa15.55■□□□□ 0.08
TARDBP-201ENST00000240185 MIER3Q7Z3K6 550 aa15.55■□□□□ 0.08
TARDBP-201ENST00000240185 DDX21Q9NR30 783 aaKnown RBP eCLIP15.55■□□□□ 0.08
TARDBP-201ENST00000240185 PROSER2Q86WR7 435 aaPredicted RBP15.54■□□□□ 0.08
TARDBP-201ENST00000240185 MGEA5O60502 916 aa15.54■□□□□ 0.08
TARDBP-201ENST00000240185 FAM13AO94988 1023 aa15.54■□□□□ 0.08
TARDBP-201ENST00000240185 COG7P83436 770 aa15.54■□□□□ 0.08
TARDBP-201ENST00000240185 TRIM31Q9BZY9 425 aa15.54■□□□□ 0.08
TARDBP-201ENST00000240185 NCOA2Q15596 1464 aa15.54■□□□□ 0.08
TARDBP-201ENST00000240185 SATB1Q01826 763 aa15.54■□□□□ 0.08
TARDBP-201ENST00000240185 PRR16Q569H4 304 aa15.54■□□□□ 0.08
TARDBP-201ENST00000240185 IFIT1BQ5T764 474 aaKnown RBP15.54■□□□□ 0.08
TARDBP-201ENST00000240185 LDHAL6AQ6ZMR3 332 aa15.54■□□□□ 0.08
TARDBP-201ENST00000240185 HS2ST1Q7LGA3 356 aa15.54■□□□□ 0.08
TARDBP-201ENST00000240185 HEATR3Q7Z4Q2 680 aa15.54■□□□□ 0.08
TARDBP-201ENST00000240185 CCT6BQ92526 530 aa15.54■□□□□ 0.08
TARDBP-201ENST00000240185 CSRNP2Q9H175 543 aa15.54■□□□□ 0.08
TARDBP-201ENST00000240185 PRDM11Q9NQV5 511 aa15.54■□□□□ 0.08
TARDBP-201ENST00000240185 HIP1RO75146 1068 aa15.54■□□□□ 0.08
TARDBP-201ENST00000240185 PPFIA4O75335 1185 aa15.54■□□□□ 0.08
TARDBP-201ENST00000240185 SLC4A8Q2Y0W8 1093 aa15.54■□□□□ 0.08
TARDBP-201ENST00000240185 HHATQ5VTY9 493 aa15.54■□□□□ 0.08
TARDBP-201ENST00000240185 SND1Q7KZF4 910 aaKnown RBP eCLIP15.54■□□□□ 0.08
TARDBP-201ENST00000240185 TPX2Q9ULW0 747 aaKnown RBP15.54■□□□□ 0.08
TARDBP-201ENST00000240185 RIPOR2Q9Y4F9 1068 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms