RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 PTPN12Q05209 780 aaKnown RBP14□□□□□ -0.17
SF3B6-201ENST00000233468 UBE4AQ14139 1066 aa14□□□□□ -0.17
SF3B6-201ENST00000233468 PODNQ7Z5L7 613 aa14□□□□□ -0.17
SF3B6-201ENST00000233468 GPR101Q96P66 508 aaPredicted RBP14□□□□□ -0.17
SF3B6-201ENST00000233468 COPRSQ9NQ92 184 aa14□□□□□ -0.17
SF3B6-201ENST00000233468 TSKSQ9UJT2 592 aa14□□□□□ -0.17
SF3B6-201ENST00000233468 COG6Q9Y2V7 657 aa14□□□□□ -0.17
SF3B6-201ENST00000233468 RIPOR2Q9Y4F9 1068 aa14□□□□□ -0.17
SF3B6-201ENST00000233468 TLL2Q9Y6L7 1015 aa14□□□□□ -0.17
SF3B6-201ENST00000233468 IL15P40933 162 aaPredicted RBP13.99□□□□□ -0.17
SF3B6-201ENST00000233468 RFX5P48382 616 aaPredicted RBP13.99□□□□□ -0.17
SF3B6-201ENST00000233468 CLCN6P51797 869 aa13.99□□□□□ -0.17
SF3B6-201ENST00000233468 MAP2K1Q02750 393 aaPredicted RBP13.99□□□□□ -0.17
SF3B6-201ENST00000233468 CIAPIN1Q6FI81 312 aa13.99□□□□□ -0.17
SF3B6-201ENST00000233468 TRPM4Q8TD43 1214 aa13.99□□□□□ -0.17
SF3B6-201ENST00000233468 COA1Q9GZY4 146 aa13.99□□□□□ -0.17
SF3B6-201ENST00000233468 CEP126Q9P2H0 1117 aa13.99□□□□□ -0.17
SF3B6-201ENST00000233468 ECE2O60344 883 aa13.98□□□□□ -0.17
SF3B6-201ENST00000233468 HMMRO75330 724 aa13.98□□□□□ -0.17
SF3B6-201ENST00000233468 TAF5LO75529 589 aa13.98□□□□□ -0.17
SF3B6-201ENST00000233468 PDE8BO95263 885 aa13.98□□□□□ -0.17
SF3B6-201ENST00000233468 CELF2O95319 508 aaKnown RBP13.98□□□□□ -0.17
SF3B6-201ENST00000233468 ATP8B2P98198 1209 aa13.98□□□□□ -0.17
SF3B6-201ENST00000233468 G3BP1Q13283 466 aaKnown RBP eCLIP13.98□□□□□ -0.17
SF3B6-201ENST00000233468 C15orf52Q6ZUT6 534 aaKnown RBP13.98□□□□□ -0.17
SF3B6-201ENST00000233468 ZNF804AQ7Z570 1209 aa13.98□□□□□ -0.17
SF3B6-201ENST00000233468 HELBQ8NG08 1087 aaPredicted RBP13.98□□□□□ -0.17
SF3B6-201ENST00000233468 PUS3Q9BZE2 481 aaKnown RBP13.98□□□□□ -0.17
SF3B6-201ENST00000233468 DBNDD1Q9H9R9 158 aa13.98□□□□□ -0.17
SF3B6-201ENST00000233468 KCNQ5Q9NR82 932 aa13.98□□□□□ -0.17
SF3B6-201ENST00000233468 SCN9AQ15858 1988 aa13.98□□□□□ -0.17
SF3B6-201ENST00000233468 IFIT1P09914 478 aaKnown RBP13.97□□□□□ -0.17
SF3B6-201ENST00000233468 PUM3Q15397 648 aaKnown RBP13.97□□□□□ -0.17
SF3B6-201ENST00000233468 DOK7Q18PE1 504 aa13.97□□□□□ -0.17
SF3B6-201ENST00000233468 LRRC24Q50LG9 513 aa13.97□□□□□ -0.17
SF3B6-201ENST00000233468 CAVIN4Q5BKX8 364 aa13.97□□□□□ -0.17
SF3B6-201ENST00000233468 SAPCD2Q86UD0 394 aa13.97□□□□□ -0.17
SF3B6-201ENST00000233468 VPS37DQ86XT2 251 aa13.97□□□□□ -0.17
SF3B6-201ENST00000233468 RPAP2Q8IXW5 612 aaPredicted RBP13.97□□□□□ -0.17
SF3B6-201ENST00000233468 KLHDC4Q8TBB5 520 aa13.97□□□□□ -0.17
SF3B6-201ENST00000233468 SIL1Q9H173 461 aa13.97□□□□□ -0.17
SF3B6-201ENST00000233468 ZNF408Q9H9D4 720 aa13.97□□□□□ -0.17
SF3B6-201ENST00000233468 PGAP2Q9UHJ9 254 aa13.97□□□□□ -0.17
SF3B6-201ENST00000233468 CNOT7Q9UIV1 285 aaKnown RBP13.97□□□□□ -0.17
SF3B6-201ENST00000233468 EGFRP00533 1210 aa13.96□□□□□ -0.17
SF3B6-201ENST00000233468 RPS12P25398 132 aaKnown RBP13.96□□□□□ -0.17
SF3B6-201ENST00000233468 SAMD7Q7Z3H4 446 aa13.96□□□□□ -0.17
SF3B6-201ENST00000233468 ABHD8Q96I13 439 aa13.96□□□□□ -0.17
SF3B6-201ENST00000233468 ZBTB40Q9NUA8 1239 aa13.96□□□□□ -0.17
SF3B6-201ENST00000233468 AKAP2Q9Y2D5 859 aa13.96□□□□□ -0.17
SF3B6-201ENST00000233468 PSMD14O00487 310 aa13.95□□□□□ -0.18
SF3B6-201ENST00000233468 SLC5A1P13866 664 aa13.95□□□□□ -0.18
SF3B6-201ENST00000233468 ECE1P42892 770 aa13.95□□□□□ -0.18
SF3B6-201ENST00000233468 OS9Q13438 667 aaPredicted RBP13.95□□□□□ -0.18
SF3B6-201ENST00000233468 HSP90AB4PQ58FF6 505 aa13.95□□□□□ -0.18
SF3B6-201ENST00000233468 MICALL2Q8IY33 904 aa13.95□□□□□ -0.18
SF3B6-201ENST00000233468 SSH3Q8TE77 659 aa13.95□□□□□ -0.18
SF3B6-201ENST00000233468 LPIN2Q92539 896 aa13.95□□□□□ -0.18
SF3B6-201ENST00000233468 SPOCK2Q92563 424 aa13.95□□□□□ -0.18
SF3B6-201ENST00000233468 ZIC5Q96T25 663 aa13.95□□□□□ -0.18
SF3B6-201ENST00000233468 C1orf115Q9H7X2 142 aa13.95□□□□□ -0.18
SF3B6-201ENST00000233468 MYH3P11055 1940 aa13.94□□□□□ -0.18
SF3B6-201ENST00000233468 PNMA6EA0A0J9YXQ4 647 aa13.94□□□□□ -0.18
SF3B6-201ENST00000233468 USP17L3A6NCW0 530 aa13.94□□□□□ -0.18
SF3B6-201ENST00000233468 USP17L4A6NCW7 530 aa13.94□□□□□ -0.18
SF3B6-201ENST00000233468 HIBADHP31937 336 aaKnown RBP13.94□□□□□ -0.18
SF3B6-201ENST00000233468 MMP14P50281 582 aa13.94□□□□□ -0.18
SF3B6-201ENST00000233468 AAMPQ13685 434 aa13.94□□□□□ -0.18
SF3B6-201ENST00000233468 C20orf194Q5TEA3 1177 aa13.94□□□□□ -0.18
SF3B6-201ENST00000233468 CEP85Q6P2H3 762 aa13.94□□□□□ -0.18
SF3B6-201ENST00000233468 USP17L1Q7RTZ2 530 aa13.94□□□□□ -0.18
SF3B6-201ENST00000233468 ATG9AQ7Z3C6 839 aa13.94□□□□□ -0.18
SF3B6-201ENST00000233468 USP48Q86UV5 1035 aa13.94□□□□□ -0.18
SF3B6-201ENST00000233468 DPF2Q92785 391 aa13.94□□□□□ -0.18
SF3B6-201ENST00000233468 PA2G4Q9UQ80 394 aaKnown RBP13.94□□□□□ -0.18
SF3B6-201ENST00000233468 MYO3BQ8WXR4 1341 aa13.93□□□□□ -0.18
SF3B6-201ENST00000233468 SURF6O75683 361 aaKnown RBP13.93□□□□□ -0.18
SF3B6-201ENST00000233468 TBC1D10BQ4KMP7 808 aaPredicted RBP13.93□□□□□ -0.18
SF3B6-201ENST00000233468 STRIP1Q5VSL9 837 aa13.93□□□□□ -0.18
SF3B6-201ENST00000233468 ERC1Q8IUD2 1116 aa13.93□□□□□ -0.18
SF3B6-201ENST00000233468 VGLL2Q8N8G2 317 aa13.93□□□□□ -0.18
SF3B6-201ENST00000233468 BEGAINQ9BUH8 593 aa13.93□□□□□ -0.18
SF3B6-201ENST00000233468 CD209Q9NNX6 404 aa13.93□□□□□ -0.18
SF3B6-201ENST00000233468 GNL3LQ9NVN8 582 aaKnown RBP13.93□□□□□ -0.18
SF3B6-201ENST00000233468 H7C1D1 291 aa13.92□□□□□ -0.18
SF3B6-201ENST00000233468 FRAT2O75474 233 aaPredicted RBP13.92□□□□□ -0.18
SF3B6-201ENST00000233468 VIL1P09327 827 aaKnown RBP13.92□□□□□ -0.18
SF3B6-201ENST00000233468 IL1R1P14778 569 aa13.92□□□□□ -0.18
SF3B6-201ENST00000233468 MAP2K2P36507 400 aa13.92□□□□□ -0.18
SF3B6-201ENST00000233468 ATP2B3Q16720 1220 aa13.92□□□□□ -0.18
SF3B6-201ENST00000233468 RBM26Q5T8P6 1007 aaKnown RBP13.92□□□□□ -0.18
SF3B6-201ENST00000233468 TTLL5Q6EMB2 1281 aa13.92□□□□□ -0.18
SF3B6-201ENST00000233468 CDC37L1Q7L3B6 337 aa13.92□□□□□ -0.18
SF3B6-201ENST00000233468 AGBL3Q8NEM8 1001 aa13.92□□□□□ -0.18
SF3B6-201ENST00000233468 ZC3H15Q8WU90 426 aaKnown RBP13.92□□□□□ -0.18
SF3B6-201ENST00000233468 TNRC18O15417 2968 aaPredicted RBP13.91□□□□□ -0.18
SF3B6-201ENST00000233468 WTIPA6NIX2 430 aaPredicted RBP13.91□□□□□ -0.18
SF3B6-201ENST00000233468 GALR2O43603 387 aaPredicted RBP13.91□□□□□ -0.18
SF3B6-201ENST00000233468 FGFR2P21802 821 aa13.91□□□□□ -0.18
SF3B6-201ENST00000233468 RSBN1LQ6PCB5 846 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms