RNA–Protein interactions for RNA: ENST00000231021.8

CDH9-201, Transcript of cadherin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH9, Length 3,079 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-201ENST00000231021 SSBP05455 408 aaKnown RBP eCLIP5.05□□□□□ -1.6
CDH9-201ENST00000231021 COL6A1P12109 1028 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 MYCLP1P12525 358 aaPredicted RBP5.05□□□□□ -1.6
CDH9-201ENST00000231021 TSPAN7P41732 249 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 ATP13A4Q4VNC1 1196 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 AGAP9Q5VTM2 703 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 IFNL3Q8IZI9 196 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 RNF217Q8TC41 542 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 COG1Q8WTW3 980 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 FRAT1Q92837 279 aaPredicted RBP5.05□□□□□ -1.6
CDH9-201ENST00000231021 MPP4Q96JB8 637 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 YIPF4Q9BSR8 244 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.05□□□□□ -1.6
CDH9-201ENST00000231021 SLC12A5Q9H2X9 1139 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 TMEM51Q9NW97 253 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 KDM4FA0A1W2PPD8 638 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 A0A1W2PRQ8 180 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 KIF3BO15066 747 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 ECE1P42892 770 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 FKBP4Q02790 459 aaKnown RBP eCLIP5.05□□□□□ -1.6
CDH9-201ENST00000231021 CFAP161Q6P656 301 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 UNC5DQ6UXZ4 953 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 MCM10Q7L590 875 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 MILR1Q7Z6M3 343 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 NDUFAF2Q8N183 169 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 TEX19Q8NA77 164 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 TMEM106CQ9BVX2 250 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 PNMA6FA0A0J9YX94 578 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 RASSF10A6NK89 507 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 BOLA2-SMG1P6H3BVE0 249 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 WASLO00401 505 aaPredicted RBP5.05□□□□□ -1.6
CDH9-201ENST00000231021 KLF4O43474 513 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 DKK1O94907 266 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 GUCY2FP51841 1108 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 HSD17B7P56937 341 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 GOLGA2Q08379 1002 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 PDXDC2PQ6P474 469 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 C16orf87Q6PH81 154 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.05□□□□□ -1.6
CDH9-201ENST00000231021 KCT2Q8NC54 265 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 APPBP2Q92624 585 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 HOOK2Q96ED9 719 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 LRGUKQ96M69 825 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 NIF3L1Q9GZT8 377 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 OCEL1Q9H607 264 aa5.05□□□□□ -1.6
CDH9-201ENST00000231021 RAPGEF2Q9Y4G8 1499 aa5.04□□□□□ -1.6
CDH9-201ENST00000231021 PRPF40AO75400 957 aaKnown RBP5.04□□□□□ -1.6
CDH9-201ENST00000231021 TIPRLO75663 272 aa5.04□□□□□ -1.6
CDH9-201ENST00000231021 GJA8P48165 433 aa5.04□□□□□ -1.6
CDH9-201ENST00000231021 CCT2P78371 535 aaKnown RBP5.04□□□□□ -1.6
CDH9-201ENST00000231021 APOBRQ0VD83 1088 aa5.04□□□□□ -1.6
CDH9-201ENST00000231021 GALEQ14376 348 aa5.04□□□□□ -1.6
CDH9-201ENST00000231021 CPXCR1Q8N123 301 aa5.04□□□□□ -1.6
CDH9-201ENST00000231021 TSEN2Q8NCE0 465 aaKnown RBP5.04□□□□□ -1.6
CDH9-201ENST00000231021 TRIM56Q9BRZ2 755 aaKnown RBP5.04□□□□□ -1.6
CDH9-201ENST00000231021 XPO4Q9C0E2 1151 aaKnown RBP5.04□□□□□ -1.6
CDH9-201ENST00000231021 SLKQ9H2G2 1235 aaPredicted RBP5.04□□□□□ -1.6
CDH9-201ENST00000231021 PRDM4Q9UKN5 801 aa5.04□□□□□ -1.6
CDH9-201ENST00000231021 EFR3BQ9Y2G0 817 aa5.04□□□□□ -1.6
CDH9-201ENST00000231021 POLR1AO95602 1720 aaPredicted RBP5.04□□□□□ -1.6
CDH9-201ENST00000231021 SMARCA4P51532 1647 aa5.04□□□□□ -1.6
CDH9-201ENST00000231021 UACAQ9BZF9 1416 aa5.04□□□□□ -1.6
CDH9-201ENST00000231021 CCDC163A0A0D9SF12 145 aa5.04□□□□□ -1.6
CDH9-201ENST00000231021 SARSP49591 514 aaKnown RBP5.04□□□□□ -1.6
CDH9-201ENST00000231021 BPIFB3P59826 476 aa5.04□□□□□ -1.6
CDH9-201ENST00000231021 ORC1Q13415 861 aa5.04□□□□□ -1.6
CDH9-201ENST00000231021 DSC3Q14574 896 aa5.04□□□□□ -1.6
CDH9-201ENST00000231021 VPS72Q15906 364 aa5.04□□□□□ -1.6
CDH9-201ENST00000231021 NBPF6Q5VWK0 638 aa5.04□□□□□ -1.6
CDH9-201ENST00000231021 LARP1Q6PKG0 1096 aaKnown RBP5.04□□□□□ -1.6
CDH9-201ENST00000231021 NBPF5PQ86XG9 351 aaPredicted RBP5.04□□□□□ -1.6
CDH9-201ENST00000231021 THNSL2Q86YJ6 484 aa5.04□□□□□ -1.6
CDH9-201ENST00000231021 OR8H2Q8N162 312 aa5.04□□□□□ -1.6
CDH9-201ENST00000231021 ARL10Q8N8L6 244 aa5.04□□□□□ -1.6
CDH9-201ENST00000231021 VMP1Q96GC9 406 aa5.04□□□□□ -1.6
CDH9-201ENST00000231021 NBPF4Q96M43 638 aa5.04□□□□□ -1.6
CDH9-201ENST00000231021 PRKRIP1Q9H875 184 aaPredicted RBP5.04□□□□□ -1.6
CDH9-201ENST00000231021 MKS1Q9NXB0 559 aa5.04□□□□□ -1.6
CDH9-201ENST00000231021 RABL2AQ9UBK7 228 aaPredicted RBP5.04□□□□□ -1.6
CDH9-201ENST00000231021 TIAM1Q13009 1591 aa5.03□□□□□ -1.6
CDH9-201ENST00000231021 NCOA1Q15788 1441 aa5.03□□□□□ -1.6
CDH9-201ENST00000231021 A6NHS1 94 aa5.03□□□□□ -1.6
CDH9-201ENST00000231021 SMTNL1A8MU46 457 aa5.03□□□□□ -1.6
CDH9-201ENST00000231021 C19orf81C9J6K1 198 aa5.03□□□□□ -1.6
CDH9-201ENST00000231021 ZBTB39O15060 712 aa5.03□□□□□ -1.6
CDH9-201ENST00000231021 TNFRSF21O75509 655 aa5.03□□□□□ -1.6
CDH9-201ENST00000231021 TNNT2P45379 298 aaPredicted RBP5.03□□□□□ -1.6
CDH9-201ENST00000231021 NFKB2Q00653 900 aa5.03□□□□□ -1.6
CDH9-201ENST00000231021 RAB33AQ14088 237 aa5.03□□□□□ -1.6
CDH9-201ENST00000231021 MLC1Q15049 377 aa5.03□□□□□ -1.6
CDH9-201ENST00000231021 JAKMIP3Q5VZ66 844 aa5.03□□□□□ -1.6
CDH9-201ENST00000231021 PGBD4Q96DM1 585 aa5.03□□□□□ -1.6
CDH9-201ENST00000231021 TRMT2BQ96GJ1 504 aaKnown RBP5.03□□□□□ -1.6
CDH9-201ENST00000231021 SH3GLB2Q9NR46 395 aa5.03□□□□□ -1.6
CDH9-201ENST00000231021 ERBB4Q15303 1308 aa5.03□□□□□ -1.6
CDH9-201ENST00000231021 BICDL2A1A5D9 508 aa5.03□□□□□ -1.6
CDH9-201ENST00000231021 C2orf72A6NCS6 295 aa5.03□□□□□ -1.6
CDH9-201ENST00000231021 PYGLP06737 847 aa5.03□□□□□ -1.6
CDH9-201ENST00000231021 FGFR4P22455 802 aa5.03□□□□□ -1.6
CDH9-201ENST00000231021 STK3Q13188 491 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms