RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 NYXQ9GZU5 481 aa13.07□□□□□ -0.32
LAMA4-201ENST00000230538 TTC41PQ6P2S7 1318 aa13.07□□□□□ -0.32
LAMA4-201ENST00000230538 VTI1AQ96AJ9 217 aa13.07□□□□□ -0.32
LAMA4-201ENST00000230538 FAM212AQ96EL1 285 aa13.07□□□□□ -0.32
LAMA4-201ENST00000230538 SELENOSQ9BQE4 189 aa13.07□□□□□ -0.32
LAMA4-201ENST00000230538 SRRTQ9BXP5 876 aaKnown RBP13.07□□□□□ -0.32
LAMA4-201ENST00000230538 EIF2AK4Q9P2K8 1649 aaKnown RBP13.07□□□□□ -0.32
LAMA4-201ENST00000230538 PLS1Q14651 629 aa13.07□□□□□ -0.32
LAMA4-201ENST00000230538 RAB3IL1Q8TBN0 382 aa13.07□□□□□ -0.32
LAMA4-201ENST00000230538 ATRIPQ8WXE1 791 aa13.07□□□□□ -0.32
LAMA4-201ENST00000230538 CCDC42Q96M95 316 aa13.07□□□□□ -0.32
LAMA4-201ENST00000230538 IVLP07476 585 aa13.07□□□□□ -0.32
LAMA4-201ENST00000230538 RAB3GAP1Q15042 981 aa13.07□□□□□ -0.32
LAMA4-201ENST00000230538 MNAT1P51948 309 aa13.06□□□□□ -0.32
LAMA4-201ENST00000230538 TNNI2P48788 182 aa13.06□□□□□ -0.32
LAMA4-201ENST00000230538 MSL1Q68DK7 614 aa13.06□□□□□ -0.32
LAMA4-201ENST00000230538 CEP85Q6P2H3 762 aa13.06□□□□□ -0.32
LAMA4-201ENST00000230538 ZRANB1Q9UGI0 708 aa13.06□□□□□ -0.32
LAMA4-201ENST00000230538 RSPH14Q9UHP6 348 aa13.06□□□□□ -0.32
LAMA4-201ENST00000230538 ANKS4BQ8N8V4 417 aa13.06□□□□□ -0.32
LAMA4-201ENST00000230538 MSH6P52701 1360 aa13.06□□□□□ -0.32
LAMA4-201ENST00000230538 TUBB4AP04350 444 aa13.06□□□□□ -0.32
LAMA4-201ENST00000230538 CREB3L3Q68CJ9 461 aa13.06□□□□□ -0.32
LAMA4-201ENST00000230538 SLU7O95391 586 aaKnown RBP13.06□□□□□ -0.32
LAMA4-201ENST00000230538 STX17P56962 302 aa13.06□□□□□ -0.32
LAMA4-201ENST00000230538 MCM9Q9NXL9 1143 aa13.06□□□□□ -0.32
LAMA4-201ENST00000230538 PLCB3Q01970 1234 aa13.05□□□□□ -0.32
LAMA4-201ENST00000230538 NCBP1Q09161 790 aaKnown RBP13.05□□□□□ -0.32
LAMA4-201ENST00000230538 EIF4A2Q14240 407 aaKnown RBP13.05□□□□□ -0.32
LAMA4-201ENST00000230538 KARSQ15046 597 aaKnown RBP13.05□□□□□ -0.32
LAMA4-201ENST00000230538 RUFY3Q7L099 469 aa13.05□□□□□ -0.32
LAMA4-201ENST00000230538 MIGA1Q8NAN2 632 aa13.05□□□□□ -0.32
LAMA4-201ENST00000230538 CLCN1P35523 988 aa13.05□□□□□ -0.32
LAMA4-201ENST00000230538 APBB1IPQ7Z5R6 666 aaPredicted RBP13.05□□□□□ -0.32
LAMA4-201ENST00000230538 DZIP3Q86Y13 1208 aaKnown RBP13.05□□□□□ -0.32
LAMA4-201ENST00000230538 TIGD1Q96MW7 591 aa13.05□□□□□ -0.32
LAMA4-201ENST00000230538 MAP3K9P80192 1104 aa13.05□□□□□ -0.32
LAMA4-201ENST00000230538 TTC14Q96N46 770 aa13.05□□□□□ -0.32
LAMA4-201ENST00000230538 GUCA1BQ9UMX6 200 aa13.05□□□□□ -0.32
LAMA4-201ENST00000230538 BIVM-ERCC5R4GMW8 1640 aa13.05□□□□□ -0.32
LAMA4-201ENST00000230538 RLBP1P12271 317 aa13.05□□□□□ -0.32
LAMA4-201ENST00000230538 TFCP2Q12800 502 aa13.05□□□□□ -0.32
LAMA4-201ENST00000230538 MTHFSDQ2M296 383 aaKnown RBP13.05□□□□□ -0.32
LAMA4-201ENST00000230538 VEZTQ9HBM0 779 aa13.05□□□□□ -0.32
LAMA4-201ENST00000230538 TSPYL6Q8N831 410 aa13.05□□□□□ -0.32
LAMA4-201ENST00000230538 PLCG2P16885 1265 aa13.05□□□□□ -0.32
LAMA4-201ENST00000230538 DTHD1Q6ZMT9 781 aa13.05□□□□□ -0.32
LAMA4-201ENST00000230538 GTPBP4Q9BZE4 634 aaKnown RBP13.05□□□□□ -0.32
LAMA4-201ENST00000230538 DMRT2Q9Y5R5 561 aa13.05□□□□□ -0.32
LAMA4-201ENST00000230538 PTPDC1A2A3K4 754 aa13.04□□□□□ -0.32
LAMA4-201ENST00000230538 NDC80O14777 642 aa13.04□□□□□ -0.32
LAMA4-201ENST00000230538 HS2ST1Q7LGA3 356 aa13.04□□□□□ -0.32
LAMA4-201ENST00000230538 TNRQ92752 1358 aa13.04□□□□□ -0.32
LAMA4-201ENST00000230538 DUOX2Q9NRD8 1548 aa13.04□□□□□ -0.32
LAMA4-201ENST00000230538 B4DLN1 442 aa13.04□□□□□ -0.32
LAMA4-201ENST00000230538 RXRAP19793 462 aa13.04□□□□□ -0.32
LAMA4-201ENST00000230538 MRPL12P52815 198 aaKnown RBP13.04□□□□□ -0.32
LAMA4-201ENST00000230538 SIRT1Q96EB6 747 aa13.04□□□□□ -0.32
LAMA4-201ENST00000230538 ZBTB21Q9ULJ3 1066 aa13.04□□□□□ -0.32
LAMA4-201ENST00000230538 ZKSCAN5Q9Y2L8 839 aa13.04□□□□□ -0.32
LAMA4-201ENST00000230538 ZBTB16Q05516 673 aa13.04□□□□□ -0.32
LAMA4-201ENST00000230538 ZNF569Q5MCW4 686 aa13.04□□□□□ -0.32
LAMA4-201ENST00000230538 AKNAD1Q5T1N1 836 aa13.04□□□□□ -0.32
LAMA4-201ENST00000230538 GNA11P29992 359 aa13.04□□□□□ -0.32
LAMA4-201ENST00000230538 BRAPQ7Z569 592 aa13.04□□□□□ -0.32
LAMA4-201ENST00000230538 SMC6Q96SB8 1091 aa13.04□□□□□ -0.32
LAMA4-201ENST00000230538 LZTFL1Q9NQ48 299 aa13.04□□□□□ -0.32
LAMA4-201ENST00000230538 PARD3Q8TEW0 1356 aa13.04□□□□□ -0.32
LAMA4-201ENST00000230538 PRAG1Q86YV5 1406 aa13.03□□□□□ -0.32
LAMA4-201ENST00000230538 UGGT2Q9NYU1 1516 aa13.03□□□□□ -0.32
LAMA4-201ENST00000230538 SEC24BO95487 1268 aa13.03□□□□□ -0.32
LAMA4-201ENST00000230538 MSANTD4Q8NCY6 345 aa13.03□□□□□ -0.32
LAMA4-201ENST00000230538 RBM28Q9NW13 759 aaKnown RBP13.03□□□□□ -0.32
LAMA4-201ENST00000230538 SMIM23A6NLE4 172 aa13.03□□□□□ -0.32
LAMA4-201ENST00000230538 CWF19L2Q2TBE0 894 aaKnown RBP13.03□□□□□ -0.32
LAMA4-201ENST00000230538 IFNKQ9P0W0 207 aa13.03□□□□□ -0.32
LAMA4-201ENST00000230538 CEP83Q9Y592 693 aa13.03□□□□□ -0.32
LAMA4-201ENST00000230538 GPATCH8Q9UKJ3 1502 aaKnown RBP13.03□□□□□ -0.32
LAMA4-201ENST00000230538 PLIN2Q99541 437 aa13.03□□□□□ -0.32
LAMA4-201ENST00000230538 IRS4O14654 1257 aaPredicted RBP13.03□□□□□ -0.32
LAMA4-201ENST00000230538 KRT24Q2M2I5 525 aa13.03□□□□□ -0.32
LAMA4-201ENST00000230538 IFT81Q8WYA0 676 aa13.03□□□□□ -0.32
LAMA4-201ENST00000230538 TSGA10Q9BZW7 698 aa13.03□□□□□ -0.32
LAMA4-201ENST00000230538 ATP6V0A2Q9Y487 856 aa13.03□□□□□ -0.32
LAMA4-201ENST00000230538 ABCC1P33527 1531 aa13.03□□□□□ -0.32
LAMA4-201ENST00000230538 PLEKHM2Q8IWE5 1019 aa13.03□□□□□ -0.32
LAMA4-201ENST00000230538 CCDC121Q6ZUS5 278 aa13.02□□□□□ -0.32
LAMA4-201ENST00000230538 LRRC59Q96AG4 307 aaKnown RBP13.02□□□□□ -0.32
LAMA4-201ENST00000230538 PPP1R7Q15435 360 aa13.02□□□□□ -0.32
LAMA4-201ENST00000230538 DHX32Q7L7V1 743 aaKnown RBP13.02□□□□□ -0.32
LAMA4-201ENST00000230538 SMC5Q8IY18 1101 aa13.02□□□□□ -0.32
LAMA4-201ENST00000230538 TUBB4BP68371 445 aa13.02□□□□□ -0.33
LAMA4-201ENST00000230538 LINS1Q8NG48 757 aa13.02□□□□□ -0.33
LAMA4-201ENST00000230538 SYT10Q6XYQ8 523 aa13.02□□□□□ -0.33
LAMA4-201ENST00000230538 HELBQ8NG08 1087 aaPredicted RBP13.02□□□□□ -0.33
LAMA4-201ENST00000230538 SYCP2Q9BX26 1530 aa13.02□□□□□ -0.33
LAMA4-201ENST00000230538 ATP2A2P16615 1042 aaKnown RBP13.02□□□□□ -0.33
LAMA4-201ENST00000230538 PSMC4P43686 418 aa13.02□□□□□ -0.33
LAMA4-201ENST00000230538 ZC3H12CQ9C0D7 883 aaKnown RBP13.02□□□□□ -0.33
LAMA4-201ENST00000230538 BICC1Q9H694 974 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms