RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 CAVIN2O95810 425 aa24.25■■□□□ 1.47
SNX3-201ENST00000230085 CASTP20810 708 aaKnown RBP24.25■■□□□ 1.47
SNX3-201ENST00000230085 PDE6BP35913 854 aa24.25■■□□□ 1.47
SNX3-201ENST00000230085 CHAF1AQ13111 956 aaPredicted RBP24.25■■□□□ 1.47
SNX3-201ENST00000230085 NLRP3Q96P20 1036 aa24.25■■□□□ 1.47
SNX3-201ENST00000230085 TNRC6CQ9HCJ0 1690 aaKnown RBP24.25■■□□□ 1.47
SNX3-201ENST00000230085 CHRNA5P30532 468 aa24.24■■□□□ 1.47
SNX3-201ENST00000230085 NLGN2Q8NFZ4 835 aa24.24■■□□□ 1.47
SNX3-201ENST00000230085 SYT17Q9BSW7 474 aa24.24■■□□□ 1.47
SNX3-201ENST00000230085 A0A0G2JLW4 131 aa24.24■■□□□ 1.47
SNX3-201ENST00000230085 AP5Z1O43299 807 aa24.24■■□□□ 1.47
SNX3-201ENST00000230085 PDE8AO60658 829 aa24.24■■□□□ 1.47
SNX3-201ENST00000230085 KRT85P78386 507 aa24.24■■□□□ 1.47
SNX3-201ENST00000230085 DNM1Q05193 864 aaKnown RBP24.24■■□□□ 1.47
SNX3-201ENST00000230085 ST3GAL1Q11201 340 aa24.24■■□□□ 1.47
SNX3-201ENST00000230085 GIMAP6Q6P9H5 292 aa24.24■■□□□ 1.47
SNX3-201ENST00000230085 EVI5LQ96CN4 794 aa24.24■■□□□ 1.47
SNX3-201ENST00000230085 GPATCH3Q96I76 525 aa24.24■■□□□ 1.47
SNX3-201ENST00000230085 ZNF830Q96NB3 372 aaPredicted RBP24.24■■□□□ 1.47
SNX3-201ENST00000230085 ECHDC1Q9NTX5 307 aa24.24■■□□□ 1.47
SNX3-201ENST00000230085 KLRG2A4D1S0 409 aaPredicted RBP24.23■■□□□ 1.47
SNX3-201ENST00000230085 LARGE1O95461 756 aa24.23■■□□□ 1.47
SNX3-201ENST00000230085 ZSCAN20P17040 1043 aaPredicted RBP24.23■■□□□ 1.47
SNX3-201ENST00000230085 TGFB2P61812 414 aa24.23■■□□□ 1.47
SNX3-201ENST00000230085 ANKRD1Q15327 319 aa24.22■■□□□ 1.47
SNX3-201ENST00000230085 TSGA10IPQ3SY00 556 aa24.22■■□□□ 1.47
SNX3-201ENST00000230085 KAZALD1Q96I82 304 aa24.22■■□□□ 1.47
SNX3-201ENST00000230085 SUCLG2Q96I99 432 aa24.22■■□□□ 1.47
SNX3-201ENST00000230085 SCAND2PQ9GZW5 306 aaPredicted RBP24.22■■□□□ 1.47
SNX3-201ENST00000230085 RIC1Q4ADV7 1423 aa24.22■■□□□ 1.47
SNX3-201ENST00000230085 DPEP1P16444 411 aa24.21■■□□□ 1.47
SNX3-201ENST00000230085 MAP3K11Q16584 847 aa24.21■■□□□ 1.47
SNX3-201ENST00000230085 EPHA10Q5JZY3 1008 aa24.21■■□□□ 1.47
SNX3-201ENST00000230085 C2CD5Q86YS7 1000 aa24.21■■□□□ 1.47
SNX3-201ENST00000230085 DDX19AQ9NUU7 478 aaKnown RBP24.21■■□□□ 1.47
SNX3-201ENST00000230085 H0YIN7 160 aa24.21■■□□□ 1.47
SNX3-201ENST00000230085 SRGNP10124 158 aa24.21■■□□□ 1.47
SNX3-201ENST00000230085 ZKSCAN1P17029 563 aaPredicted RBP24.21■■□□□ 1.47
SNX3-201ENST00000230085 PSMA5P28066 241 aa24.21■■□□□ 1.47
SNX3-201ENST00000230085 FOXD4L6Q3SYB3 417 aaPredicted RBP24.21■■□□□ 1.47
SNX3-201ENST00000230085 CRY2Q49AN0 593 aa24.21■■□□□ 1.47
SNX3-201ENST00000230085 CWC27Q6UX04 472 aaKnown RBP24.21■■□□□ 1.47
SNX3-201ENST00000230085 FOXD4L3Q6VB84 417 aaPredicted RBP24.21■■□□□ 1.47
SNX3-201ENST00000230085 CLASRPQ8N2M8 674 aaKnown RBP24.21■■□□□ 1.47
SNX3-201ENST00000230085 MAP4K1Q92918 833 aa24.21■■□□□ 1.47
SNX3-201ENST00000230085 PLA2G12BQ9BX93 195 aa24.21■■□□□ 1.47
SNX3-201ENST00000230085 HSP90B1P14625 803 aaKnown RBP24.2■■□□□ 1.46
SNX3-201ENST00000230085 KCNA3P22001 575 aa24.2■■□□□ 1.46
SNX3-201ENST00000230085 FOXO4P98177 505 aa24.2■■□□□ 1.46
SNX3-201ENST00000230085 CCDC83Q8IWF9 413 aa24.2■■□□□ 1.46
SNX3-201ENST00000230085 JAKMIP1Q96N16 626 aaKnown RBP24.2■■□□□ 1.46
SNX3-201ENST00000230085 CCDC85AQ96PX6 553 aaPredicted RBP24.2■■□□□ 1.46
SNX3-201ENST00000230085 NUP62CLQ9H1M0 184 aa24.2■■□□□ 1.46
SNX3-201ENST00000230085 LAMB2P55268 1798 aa24.2■■□□□ 1.46
SNX3-201ENST00000230085 WWC3Q9ULE0 1092 aa24.19■■□□□ 1.46
SNX3-201ENST00000230085 CDC25BP30305 580 aa24.19■■□□□ 1.46
SNX3-201ENST00000230085 CTSWP56202 376 aa24.19■■□□□ 1.46
SNX3-201ENST00000230085 SF3B3Q15393 1217 aaKnown RBP24.19■■□□□ 1.46
SNX3-201ENST00000230085 ME3Q16798 604 aa24.19■■□□□ 1.46
SNX3-201ENST00000230085 TTC6Q86TZ1 520 aa24.19■■□□□ 1.46
SNX3-201ENST00000230085 TTLL11Q8NHH1 800 aa24.19■■□□□ 1.46
SNX3-201ENST00000230085 TDRD7Q8NHU6 1098 aaKnown RBP24.19■■□□□ 1.46
SNX3-201ENST00000230085 FEZ1Q99689 392 aa24.19■■□□□ 1.46
SNX3-201ENST00000230085 PYCARDQ9ULZ3 195 aa24.19■■□□□ 1.46
SNX3-201ENST00000230085 MRVI1Q9Y6F6 885 aa24.19■■□□□ 1.46
SNX3-201ENST00000230085 COL11A2P13942 1736 aaPredicted RBP24.18■■□□□ 1.46
SNX3-201ENST00000230085 KIAA1551Q9HCM1 1747 aa24.18■■□□□ 1.46
SNX3-201ENST00000230085 MYH3P11055 1940 aa24.18■■□□□ 1.46
SNX3-201ENST00000230085 PTH1RQ03431 593 aa24.18■■□□□ 1.46
SNX3-201ENST00000230085 ZNF622Q969S3 477 aaKnown RBP eCLIP24.18■■□□□ 1.46
SNX3-201ENST00000230085 BICC1Q9H694 974 aaKnown RBP24.18■■□□□ 1.46
SNX3-201ENST00000230085 MYH15Q9Y2K3 1946 aa24.17■■□□□ 1.46
SNX3-201ENST00000230085 TYRO3Q06418 890 aa24.17■■□□□ 1.46
SNX3-201ENST00000230085 ADCK5Q3MIX3 580 aa24.17■■□□□ 1.46
SNX3-201ENST00000230085 PLA2G4DQ86XP0 818 aa24.16■■□□□ 1.46
SNX3-201ENST00000230085 RPGRQ92834 1020 aaKnown RBP24.16■■□□□ 1.46
SNX3-201ENST00000230085 MASTLQ96GX5 879 aa24.16■■□□□ 1.46
SNX3-201ENST00000230085 HMG20BQ9P0W2 317 aa24.16■■□□□ 1.46
SNX3-201ENST00000230085 RFX7Q2KHR2 1363 aa24.16■■□□□ 1.46
SNX3-201ENST00000230085 MED23Q9ULK4 1368 aa24.16■■□□□ 1.46
SNX3-201ENST00000230085 KIF20AO95235 890 aa24.16■■□□□ 1.46
SNX3-201ENST00000230085 CSF1RP07333 972 aa24.16■■□□□ 1.46
SNX3-201ENST00000230085 NPR1P16066 1061 aa24.16■■□□□ 1.46
SNX3-201ENST00000230085 CREB3L3Q68CJ9 461 aa24.16■■□□□ 1.46
SNX3-201ENST00000230085 LMBR1LQ6UX01 489 aa24.16■■□□□ 1.46
SNX3-201ENST00000230085 RIOK3O14730 519 aaKnown RBP24.15■■□□□ 1.46
SNX3-201ENST00000230085 MAP4K4O95819 1239 aaPredicted RBP24.15■■□□□ 1.46
SNX3-201ENST00000230085 CCDC152Q4G0S7 254 aa24.15■■□□□ 1.46
SNX3-201ENST00000230085 PRPF40BQ6NWY9 871 aaKnown RBP24.15■■□□□ 1.46
SNX3-201ENST00000230085 GREM2Q9H772 168 aa24.15■■□□□ 1.46
SNX3-201ENST00000230085 TAF1P21675 1872 aa24.15■■□□□ 1.46
SNX3-201ENST00000230085 LARP1BQ659C4 914 aaKnown RBP24.14■■□□□ 1.46
SNX3-201ENST00000230085 PDCL2Q8N4E4 241 aa24.14■■□□□ 1.46
SNX3-201ENST00000230085 CLSTN2Q9H4D0 955 aa24.14■■□□□ 1.46
SNX3-201ENST00000230085 SEC31BQ9NQW1 1179 aa24.14■■□□□ 1.46
SNX3-201ENST00000230085 HOXA10P31260 410 aaPredicted RBP24.14■■□□□ 1.45
SNX3-201ENST00000230085 RNF20Q5VTR2 975 aa24.14■■□□□ 1.45
SNX3-201ENST00000230085 C17orf53Q8N3J3 647 aaPredicted RBP24.14■■□□□ 1.45
SNX3-201ENST00000230085 TPCN1Q9ULQ1 816 aa24.14■■□□□ 1.45
SNX3-201ENST00000230085 CHMP3Q9Y3E7 222 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms