RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 WTIPA6NIX2 430 aaPredicted RBP17.09■□□□□ 0.33
PRKAB1-201ENST00000229328 BCAMP50895 628 aa17.09■□□□□ 0.33
PRKAB1-201ENST00000229328 SCRN1Q12765 414 aa17.09■□□□□ 0.33
PRKAB1-201ENST00000229328 CDC37L1Q7L3B6 337 aa17.09■□□□□ 0.33
PRKAB1-201ENST00000229328 TCRBV5S4A2TA0A5A2 114 aa17.09■□□□□ 0.33
PRKAB1-201ENST00000229328 GNPATO15228 680 aa17.09■□□□□ 0.33
PRKAB1-201ENST00000229328 RPS6KA4O75676 772 aa17.09■□□□□ 0.33
PRKAB1-201ENST00000229328 PDE6AP16499 860 aa17.09■□□□□ 0.33
PRKAB1-201ENST00000229328 ZSCAN25Q6NSZ9 544 aa17.09■□□□□ 0.33
PRKAB1-201ENST00000229328 GJD4Q96KN9 370 aaPredicted RBP17.09■□□□□ 0.33
PRKAB1-201ENST00000229328 AGXT2Q9BYV1 514 aa17.09■□□□□ 0.33
PRKAB1-201ENST00000229328 CCNL1Q9UK58 526 aaPredicted RBP17.09■□□□□ 0.33
PRKAB1-201ENST00000229328 MBD3O95983 291 aa17.08■□□□□ 0.33
PRKAB1-201ENST00000229328 DNM1Q05193 864 aaKnown RBP17.08■□□□□ 0.33
PRKAB1-201ENST00000229328 RC3H1Q5TC82 1133 aaKnown RBP17.08■□□□□ 0.33
PRKAB1-201ENST00000229328 MEX3CQ5U5Q3 659 aaKnown RBP17.08■□□□□ 0.33
PRKAB1-201ENST00000229328 TMEM87AQ8NBN3 555 aa17.08■□□□□ 0.33
PRKAB1-201ENST00000229328 CTNNA3Q9UI47 895 aa17.08■□□□□ 0.33
PRKAB1-201ENST00000229328 NHSQ6T4R5 1651 aa17.08■□□□□ 0.32
PRKAB1-201ENST00000229328 IMMTQ16891 758 aaKnown RBP17.08■□□□□ 0.32
PRKAB1-201ENST00000229328 FERMT3Q86UX7 667 aa17.08■□□□□ 0.32
PRKAB1-201ENST00000229328 GPHNQ9NQX3 736 aaPredicted RBP17.08■□□□□ 0.32
PRKAB1-201ENST00000229328 NARFQ9UHQ1 456 aa17.08■□□□□ 0.32
PRKAB1-201ENST00000229328 TAF1P21675 1872 aa17.08■□□□□ 0.32
PRKAB1-201ENST00000229328 ATRNO75882 1429 aa17.07■□□□□ 0.32
PRKAB1-201ENST00000229328 UBE3CQ15386 1083 aa17.07■□□□□ 0.32
PRKAB1-201ENST00000229328 SCN7AQ01118 1682 aa17.07■□□□□ 0.32
PRKAB1-201ENST00000229328 FIBPO43427 364 aa17.07■□□□□ 0.32
PRKAB1-201ENST00000229328 PFKFB2O60825 505 aa17.07■□□□□ 0.32
PRKAB1-201ENST00000229328 AFF2P51816 1311 aa17.06■□□□□ 0.32
PRKAB1-201ENST00000229328 HSPA1LP34931 641 aa17.06■□□□□ 0.32
PRKAB1-201ENST00000229328 SF3B3Q15393 1217 aaKnown RBP17.06■□□□□ 0.32
PRKAB1-201ENST00000229328 TPRNQ4KMQ1 711 aa17.06■□□□□ 0.32
PRKAB1-201ENST00000229328 CCDC24Q8N4L8 307 aa17.06■□□□□ 0.32
PRKAB1-201ENST00000229328 CDC5LQ99459 802 aaKnown RBP17.06■□□□□ 0.32
PRKAB1-201ENST00000229328 ATP6V1DQ9Y5K8 247 aa17.06■□□□□ 0.32
PRKAB1-201ENST00000229328 FAM173BQ6P4H8 233 aa17.06■□□□□ 0.32
PRKAB1-201ENST00000229328 DDX11Q96FC9 970 aa17.06■□□□□ 0.32
PRKAB1-201ENST00000229328 PDCP20941 246 aa17.05■□□□□ 0.32
PRKAB1-201ENST00000229328 GTF2E1P29083 439 aaPredicted RBP17.05■□□□□ 0.32
PRKAB1-201ENST00000229328 CCT2P78371 535 aaKnown RBP17.05■□□□□ 0.32
PRKAB1-201ENST00000229328 ANKRD18AQ8IVF6 992 aa17.05■□□□□ 0.32
PRKAB1-201ENST00000229328 NBPF3Q9H094 633 aa17.05■□□□□ 0.32
PRKAB1-201ENST00000229328 SYCE3A1L190 88 aa17.05■□□□□ 0.32
PRKAB1-201ENST00000229328 CTDNEP1O95476 244 aa17.05■□□□□ 0.32
PRKAB1-201ENST00000229328 MAGEB6Q8N7X4 407 aa17.05■□□□□ 0.32
PRKAB1-201ENST00000229328 NKX2-3Q8TAU0 364 aa17.05■□□□□ 0.32
PRKAB1-201ENST00000229328 CELF1Q92879 486 aaKnown RBP17.05■□□□□ 0.32
PRKAB1-201ENST00000229328 NCOA5Q9HCD5 579 aaKnown RBP17.05■□□□□ 0.32
PRKAB1-201ENST00000229328 DENND2AQ9ULE3 1009 aa17.05■□□□□ 0.32
PRKAB1-201ENST00000229328 IQSEC3Q9UPP2 1182 aaPredicted RBP17.05■□□□□ 0.32
PRKAB1-201ENST00000229328 ZNF213O14771 459 aa17.04■□□□□ 0.32
PRKAB1-201ENST00000229328 CERKQ8TCT0 537 aa17.04■□□□□ 0.32
PRKAB1-201ENST00000229328 ARHGEF1Q92888 912 aaKnown RBP17.04■□□□□ 0.32
PRKAB1-201ENST00000229328 CASZ1Q86V15 1759 aa17.04■□□□□ 0.32
PRKAB1-201ENST00000229328 ZPR1O75312 459 aa17.04■□□□□ 0.32
PRKAB1-201ENST00000229328 PDIA3P30101 505 aaKnown RBP17.04■□□□□ 0.32
PRKAB1-201ENST00000229328 SLC10A5Q5PT55 438 aa17.04■□□□□ 0.32
PRKAB1-201ENST00000229328 MB21D2Q8IYB1 491 aaPredicted RBP17.04■□□□□ 0.32
PRKAB1-201ENST00000229328 NSUN7Q8NE18 718 aaKnown RBP17.04■□□□□ 0.32
PRKAB1-201ENST00000229328 STRBPQ96SI9 672 aaKnown RBP17.04■□□□□ 0.32
PRKAB1-201ENST00000229328 SETDB2Q96T68 719 aa17.04■□□□□ 0.32
PRKAB1-201ENST00000229328 NAP1L2Q9ULW6 460 aaPredicted RBP17.04■□□□□ 0.32
PRKAB1-201ENST00000229328 RTCBQ9Y3I0 505 aaKnown RBP17.04■□□□□ 0.32
PRKAB1-201ENST00000229328 PPFIA3O75145 1194 aa17.03■□□□□ 0.32
PRKAB1-201ENST00000229328 APPP05067 770 aa17.03■□□□□ 0.32
PRKAB1-201ENST00000229328 ANTXR2P58335 489 aa17.03■□□□□ 0.32
PRKAB1-201ENST00000229328 SMARCC2Q8TAQ2 1214 aa17.03■□□□□ 0.32
PRKAB1-201ENST00000229328 BSDC1Q9NW68 430 aaPredicted RBP17.03■□□□□ 0.32
PRKAB1-201ENST00000229328 DOCK2Q92608 1830 aa17.02■□□□□ 0.32
PRKAB1-201ENST00000229328 RGL2O15211 777 aa17.02■□□□□ 0.32
PRKAB1-201ENST00000229328 PRC1O43663 620 aa17.02■□□□□ 0.32
PRKAB1-201ENST00000229328 GYG1P46976 350 aa17.02■□□□□ 0.32
PRKAB1-201ENST00000229328 MAP3K12Q12852 859 aa17.02■□□□□ 0.32
PRKAB1-201ENST00000229328 NBPF5PQ86XG9 351 aaPredicted RBP17.02■□□□□ 0.32
PRKAB1-201ENST00000229328 TBC1D10CQ8IV04 446 aa17.02■□□□□ 0.32
PRKAB1-201ENST00000229328 AIDAQ96BJ3 306 aa17.02■□□□□ 0.32
PRKAB1-201ENST00000229328 RBSNQ9H1K0 784 aa17.02■□□□□ 0.32
PRKAB1-201ENST00000229328 MINPP1Q9UNW1 487 aa17.02■□□□□ 0.32
PRKAB1-201ENST00000229328 EP400Q96L91 3159 aa17.02■□□□□ 0.32
PRKAB1-201ENST00000229328 SEPT12Q8IYM1 358 aa17.02■□□□□ 0.32
PRKAB1-201ENST00000229328 PHF14O94880 888 aa17.01■□□□□ 0.31
PRKAB1-201ENST00000229328 MBD4O95243 580 aa17.01■□□□□ 0.31
PRKAB1-201ENST00000229328 LRSAM1Q6UWE0 723 aa17.01■□□□□ 0.31
PRKAB1-201ENST00000229328 FBXL16Q8N461 479 aa17.01■□□□□ 0.31
PRKAB1-201ENST00000229328 NCOA7Q8NI08 942 aa17.01■□□□□ 0.31
PRKAB1-201ENST00000229328 ZNF274Q96GC6 653 aaPredicted RBP17.01■□□□□ 0.31
PRKAB1-201ENST00000229328 LLPHQ9BRT6 129 aaKnown RBP17.01■□□□□ 0.31
PRKAB1-201ENST00000229328 ARMT1Q9H993 441 aa17.01■□□□□ 0.31
PRKAB1-201ENST00000229328 PTPDC1A2A3K4 754 aa17.01■□□□□ 0.31
PRKAB1-201ENST00000229328 ONECUT3O60422 494 aaPredicted RBP17.01■□□□□ 0.31
PRKAB1-201ENST00000229328 PDIA4P13667 645 aaKnown RBP17.01■□□□□ 0.31
PRKAB1-201ENST00000229328 MCM5P33992 734 aa17.01■□□□□ 0.31
PRKAB1-201ENST00000229328 UBE2HP62256 183 aa17.01■□□□□ 0.31
PRKAB1-201ENST00000229328 EPB41L4AQ9HCS5 686 aaPredicted RBP17.01■□□□□ 0.31
PRKAB1-201ENST00000229328 SBF2Q86WG5 1849 aa17.01■□□□□ 0.31
PRKAB1-201ENST00000229328 LY75O60449 1722 aa17.01■□□□□ 0.31
PRKAB1-201ENST00000229328 A0A1B0GUL6 1792 aa17.01■□□□□ 0.31
PRKAB1-201ENST00000229328 NYXQ9GZU5 481 aa17■□□□□ 0.31
PRKAB1-201ENST00000229328 TAF1LQ8IZX4 1826 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms