RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 CAVIN4Q5BKX8 364 aa15.73■□□□□ 0.11
LSM5-201ENST00000223084 CNTROBQ8N137 903 aa15.73■□□□□ 0.11
LSM5-201ENST00000223084 LPIN2Q92539 896 aa15.73■□□□□ 0.11
LSM5-201ENST00000223084 ZBTB40Q9NUA8 1239 aa15.73■□□□□ 0.11
LSM5-201ENST00000223084 ZNF609O15014 1411 aa15.72■□□□□ 0.11
LSM5-201ENST00000223084 SURF6O75683 361 aaKnown RBP15.72■□□□□ 0.11
LSM5-201ENST00000223084 SASH1O94885 1247 aa15.72■□□□□ 0.11
LSM5-201ENST00000223084 ITGBL1O95965 494 aaPredicted RBP15.72■□□□□ 0.11
LSM5-201ENST00000223084 ADORA1P30542 326 aa15.72■□□□□ 0.11
LSM5-201ENST00000223084 ZNF280AP59817 542 aaPredicted RBP15.72■□□□□ 0.11
LSM5-201ENST00000223084 TIMM10P62072 90 aa15.72■□□□□ 0.11
LSM5-201ENST00000223084 FMR1Q06787 632 aaKnown RBP eCLIP15.72■□□□□ 0.11
LSM5-201ENST00000223084 KIF4BQ2VIQ3 1234 aa15.72■□□□□ 0.11
LSM5-201ENST00000223084 KIAA0825Q8IV33 1275 aa15.72■□□□□ 0.11
LSM5-201ENST00000223084 POLR2AP24928 1970 aaKnown RBP15.72■□□□□ 0.11
LSM5-201ENST00000223084 ASTN2O75129 1339 aaPredicted RBP15.71■□□□□ 0.11
LSM5-201ENST00000223084 MYO3BQ8WXR4 1341 aa15.71■□□□□ 0.11
LSM5-201ENST00000223084 F8W031 263 aaPredicted RBP15.71■□□□□ 0.11
LSM5-201ENST00000223084 RRP1P56182 461 aaKnown RBP15.71■□□□□ 0.11
LSM5-201ENST00000223084 CHAF1AQ13111 956 aaPredicted RBP15.71■□□□□ 0.11
LSM5-201ENST00000223084 MYOZ2Q9NPC6 264 aa15.71■□□□□ 0.11
LSM5-201ENST00000223084 FAM205AQ6ZU69 1335 aa15.7■□□□□ 0.1
LSM5-201ENST00000223084 PASKQ96RG2 1323 aa15.7■□□□□ 0.1
LSM5-201ENST00000223084 FRAT2O75474 233 aaPredicted RBP15.7■□□□□ 0.1
LSM5-201ENST00000223084 APLP1P51693 650 aa15.7■□□□□ 0.1
LSM5-201ENST00000223084 OS9Q13438 667 aaPredicted RBP15.7■□□□□ 0.1
LSM5-201ENST00000223084 PGAP2Q9UHJ9 254 aa15.7■□□□□ 0.1
LSM5-201ENST00000223084 A0A1B0GUL7 405 aa15.69■□□□□ 0.1
LSM5-201ENST00000223084 TRAF5O00463 557 aa15.69■□□□□ 0.1
LSM5-201ENST00000223084 PHKA1P46020 1223 aa15.69■□□□□ 0.1
LSM5-201ENST00000223084 SCARF1Q14162 830 aa15.69■□□□□ 0.1
LSM5-201ENST00000223084 MFSD14BQ5SR56 506 aa15.69■□□□□ 0.1
LSM5-201ENST00000223084 DLK2Q6UY11 383 aa15.69■□□□□ 0.1
LSM5-201ENST00000223084 SIRT2Q8IXJ6 389 aa15.69■□□□□ 0.1
LSM5-201ENST00000223084 GLIS2Q9BZE0 524 aaPredicted RBP15.69■□□□□ 0.1
LSM5-201ENST00000223084 FKBP1AP62942 108 aaKnown RBP15.68■□□□□ 0.1
LSM5-201ENST00000223084 GRIK5Q16478 980 aa15.68■□□□□ 0.1
LSM5-201ENST00000223084 OGFOD1Q8N543 542 aa15.68■□□□□ 0.1
LSM5-201ENST00000223084 ZC3H15Q8WU90 426 aaKnown RBP15.68■□□□□ 0.1
LSM5-201ENST00000223084 NEUROD6Q96NK8 337 aa15.68■□□□□ 0.1
LSM5-201ENST00000223084 AKAP2Q9Y2D5 859 aa15.68■□□□□ 0.1
LSM5-201ENST00000223084 NOP58Q9Y2X3 529 aaKnown RBP15.68■□□□□ 0.1
LSM5-201ENST00000223084 PCDHAC2Q9Y5I4 1007 aa15.68■□□□□ 0.1
LSM5-201ENST00000223084 NBPF9Q3BBW0 867 aa15.67■□□□□ 0.1
LSM5-201ENST00000223084 USP48Q86UV5 1035 aa15.67■□□□□ 0.1
LSM5-201ENST00000223084 XAGE2Q96GT9 111 aa15.67■□□□□ 0.1
LSM5-201ENST00000223084 CHMP4BQ9H444 224 aaKnown RBP15.67■□□□□ 0.1
LSM5-201ENST00000223084 GGA3Q9NZ52 723 aa15.67■□□□□ 0.1
LSM5-201ENST00000223084 HDAC9Q9UKV0 1011 aa15.67■□□□□ 0.1
LSM5-201ENST00000223084 SCAF8Q9UPN6 1271 aaKnown RBP15.67■□□□□ 0.1
LSM5-201ENST00000223084 EXOC6BQ9Y2D4 811 aa15.67■□□□□ 0.1
LSM5-201ENST00000223084 COL1A1P02452 1464 aaPredicted RBP15.66■□□□□ 0.1
LSM5-201ENST00000223084 CCDC102BQ68D86 513 aa15.66■□□□□ 0.1
LSM5-201ENST00000223084 RPAP2Q8IXW5 612 aaPredicted RBP15.66■□□□□ 0.1
LSM5-201ENST00000223084 DCPSQ96C86 337 aaKnown RBP15.66■□□□□ 0.1
LSM5-201ENST00000223084 MYH13Q9UKX3 1938 aa15.66■□□□□ 0.1
LSM5-201ENST00000223084 ARAP2Q8WZ64 1704 aa15.65■□□□□ 0.1
LSM5-201ENST00000223084 ADM5C9JUS6 153 aa15.65■□□□□ 0.1
LSM5-201ENST00000223084 WNT10BO00744 389 aa15.65■□□□□ 0.1
LSM5-201ENST00000223084 TNNI3KQ59H18 835 aa15.65■□□□□ 0.1
LSM5-201ENST00000223084 ANGEL2Q5VTE6 544 aaKnown RBP15.65■□□□□ 0.1
LSM5-201ENST00000223084 CDC37L1Q7L3B6 337 aa15.65■□□□□ 0.1
LSM5-201ENST00000223084 KRT26Q7Z3Y9 468 aa15.65■□□□□ 0.1
LSM5-201ENST00000223084 CRBNQ96SW2 442 aa15.65■□□□□ 0.1
LSM5-201ENST00000223084 GNL3LQ9NVN8 582 aaKnown RBP15.65■□□□□ 0.1
LSM5-201ENST00000223084 TTF2Q9UNY4 1162 aaKnown RBP15.65■□□□□ 0.1
LSM5-201ENST00000223084 FPGT-TNNI3KV9GXZ4 949 aa15.65■□□□□ 0.1
LSM5-201ENST00000223084 APBB1O00213 710 aa15.64■□□□□ 0.09
LSM5-201ENST00000223084 DLGAP5Q15398 846 aa15.64■□□□□ 0.09
LSM5-201ENST00000223084 CFAP100Q494V2 611 aa15.64■□□□□ 0.09
LSM5-201ENST00000223084 TBC1D22AQ8WUA7 517 aa15.64■□□□□ 0.09
LSM5-201ENST00000223084 ZBED3Q96IU2 234 aaPredicted RBP15.64■□□□□ 0.09
LSM5-201ENST00000223084 AOX1Q06278 1338 aa15.64■□□□□ 0.09
LSM5-201ENST00000223084 TRPM7Q96QT4 1865 aa15.63■□□□□ 0.09
LSM5-201ENST00000223084 TMEM88BA6NKF7 163 aa15.63■□□□□ 0.09
LSM5-201ENST00000223084 HMMRO75330 724 aa15.63■□□□□ 0.09
LSM5-201ENST00000223084 MMP14P50281 582 aa15.63■□□□□ 0.09
LSM5-201ENST00000223084 RBM5P52756 815 aaKnown RBP eCLIP15.63■□□□□ 0.09
LSM5-201ENST00000223084 RASGRF1Q13972 1273 aa15.63■□□□□ 0.09
LSM5-201ENST00000223084 GORABQ5T7V8 394 aa15.63■□□□□ 0.09
LSM5-201ENST00000223084 CST9Q5W186 159 aa15.63■□□□□ 0.09
LSM5-201ENST00000223084 DBNDD2Q9BQY9 259 aa15.63■□□□□ 0.09
LSM5-201ENST00000223084 ZNF408Q9H9D4 720 aa15.63■□□□□ 0.09
LSM5-201ENST00000223084 GPR108Q9NPR9 543 aa15.63■□□□□ 0.09
LSM5-201ENST00000223084 CREBZFQ9NS37 354 aa15.63■□□□□ 0.09
LSM5-201ENST00000223084 CELF2O95319 508 aaKnown RBP15.62■□□□□ 0.09
LSM5-201ENST00000223084 SLC34A2O95436 690 aa15.62■□□□□ 0.09
LSM5-201ENST00000223084 COL13A1Q5TAT6 717 aaPredicted RBP15.62■□□□□ 0.09
LSM5-201ENST00000223084 SULF1Q8IWU6 871 aa15.62■□□□□ 0.09
LSM5-201ENST00000223084 DNAJC5GQ8N7S2 189 aa15.62■□□□□ 0.09
LSM5-201ENST00000223084 WDR66Q8TBY9 1149 aa15.62■□□□□ 0.09
LSM5-201ENST00000223084 PRMT6Q96LA8 375 aaPredicted RBP15.62■□□□□ 0.09
LSM5-201ENST00000223084 CCDC8Q9H0W5 538 aaPredicted RBP15.62■□□□□ 0.09
LSM5-201ENST00000223084 IL1RAPL2Q9NP60 686 aa15.62■□□□□ 0.09
LSM5-201ENST00000223084 DENND2AQ9ULE3 1009 aa15.62■□□□□ 0.09
LSM5-201ENST00000223084 SPDYE2BA6NHP3 402 aa15.61■□□□□ 0.09
LSM5-201ENST00000223084 SEMA3EO15041 775 aa15.61■□□□□ 0.09
LSM5-201ENST00000223084 SPDYE6P0CI01 402 aa15.61■□□□□ 0.09
LSM5-201ENST00000223084 CRKP46108 304 aa15.61■□□□□ 0.09
LSM5-201ENST00000223084 PRAMEF18Q5VWM3 479 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms