RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 IQSEC3Q9UPP2 1182 aaPredicted RBP12.21□□□□□ -0.45
VPS18-201ENST00000220509 MINDY4BA8MYZ0 360 aa12.21□□□□□ -0.46
VPS18-201ENST00000220509 TULP2O00295 520 aa12.21□□□□□ -0.46
VPS18-201ENST00000220509 ZNF213O14771 459 aa12.21□□□□□ -0.46
VPS18-201ENST00000220509 UVSSAQ2YD98 709 aa12.21□□□□□ -0.46
VPS18-201ENST00000220509 ANO6Q4KMQ2 910 aa12.21□□□□□ -0.46
VPS18-201ENST00000220509 GNL3LQ9NVN8 582 aaKnown RBP12.21□□□□□ -0.46
VPS18-201ENST00000220509 MARCH6O60337 910 aa12.2□□□□□ -0.46
VPS18-201ENST00000220509 GUCY2CP25092 1073 aa12.2□□□□□ -0.46
VPS18-201ENST00000220509 GYS2P54840 703 aa12.2□□□□□ -0.46
VPS18-201ENST00000220509 NAP1L1P55209 391 aaKnown RBP12.2□□□□□ -0.46
VPS18-201ENST00000220509 CCDC69A6NI79 296 aa12.2□□□□□ -0.46
VPS18-201ENST00000220509 IL15P40933 162 aaPredicted RBP12.2□□□□□ -0.46
VPS18-201ENST00000220509 TEX13AQ9BXU3 409 aaPredicted RBP12.2□□□□□ -0.46
VPS18-201ENST00000220509 PTPN14Q15678 1187 aa12.2□□□□□ -0.46
VPS18-201ENST00000220509 MCMDC2Q4G0Z9 681 aa12.2□□□□□ -0.46
VPS18-201ENST00000220509 CCDC144CPQ8IYA2 1237 aa12.2□□□□□ -0.46
VPS18-201ENST00000220509 EAF2Q96CJ1 260 aaPredicted RBP12.2□□□□□ -0.46
VPS18-201ENST00000220509 NAPBQ9H115 298 aa12.2□□□□□ -0.46
VPS18-201ENST00000220509 BRMS1Q9HCU9 246 aa12.2□□□□□ -0.46
VPS18-201ENST00000220509 OGFRQ9NZT2 677 aa12.2□□□□□ -0.46
VPS18-201ENST00000220509 CCDC171Q6TFL3 1326 aa12.2□□□□□ -0.46
VPS18-201ENST00000220509 KIF1CO43896 1103 aaKnown RBP12.19□□□□□ -0.46
VPS18-201ENST00000220509 ATP6V1AP38606 617 aa12.19□□□□□ -0.46
VPS18-201ENST00000220509 CCDC91Q7Z6B0 441 aa12.19□□□□□ -0.46
VPS18-201ENST00000220509 DNAJC25Q9H1X3 360 aa12.19□□□□□ -0.46
VPS18-201ENST00000220509 DACT1Q9NYF0 836 aa12.19□□□□□ -0.46
VPS18-201ENST00000220509 SNX14Q9Y5W7 946 aa12.19□□□□□ -0.46
VPS18-201ENST00000220509 E2F4Q16254 413 aa12.19□□□□□ -0.46
VPS18-201ENST00000220509 CEP135Q66GS9 1140 aa12.19□□□□□ -0.46
VPS18-201ENST00000220509 CLEC17AQ6ZS10 378 aa12.19□□□□□ -0.46
VPS18-201ENST00000220509 PAG1Q9NWQ8 432 aa12.19□□□□□ -0.46
VPS18-201ENST00000220509 GOLGA8BA8MQT2 603 aa12.19□□□□□ -0.46
VPS18-201ENST00000220509 SCAND2PQ9GZW5 306 aaPredicted RBP12.19□□□□□ -0.46
VPS18-201ENST00000220509 NUCKS1Q9H1E3 243 aaKnown RBP12.19□□□□□ -0.46
VPS18-201ENST00000220509 TNS3Q68CZ2 1445 aa12.19□□□□□ -0.46
VPS18-201ENST00000220509 NEURL1BA8MQ27 555 aa12.18□□□□□ -0.46
VPS18-201ENST00000220509 ZNF165P49910 485 aa12.18□□□□□ -0.46
VPS18-201ENST00000220509 Q6ZUG5 572 aa12.18□□□□□ -0.46
VPS18-201ENST00000220509 KRT222Q8N1A0 295 aa12.18□□□□□ -0.46
VPS18-201ENST00000220509 KIAA1524Q8TCG1 905 aa12.18□□□□□ -0.46
VPS18-201ENST00000220509 VPS53Q5VIR6 699 aa12.18□□□□□ -0.46
VPS18-201ENST00000220509 PLBD2Q8NHP8 589 aa12.18□□□□□ -0.46
VPS18-201ENST00000220509 HMG20BQ9P0W2 317 aa12.18□□□□□ -0.46
VPS18-201ENST00000220509 A0A087WWV3 80 aa12.18□□□□□ -0.46
VPS18-201ENST00000220509 ELF2Q15723 593 aa12.18□□□□□ -0.46
VPS18-201ENST00000220509 TNNI3KQ59H18 835 aa12.18□□□□□ -0.46
VPS18-201ENST00000220509 TRIM22Q8IYM9 498 aa12.18□□□□□ -0.46
VPS18-201ENST00000220509 UBAC1Q9BSL1 405 aa12.18□□□□□ -0.46
VPS18-201ENST00000220509 SUDS3Q9H7L9 328 aaPredicted RBP12.18□□□□□ -0.46
VPS18-201ENST00000220509 FPGT-TNNI3KV9GXZ4 949 aa12.18□□□□□ -0.46
VPS18-201ENST00000220509 F13A1P00488 732 aa12.17□□□□□ -0.46
VPS18-201ENST00000220509 DNAJC14Q6Y2X3 702 aaPredicted RBP12.17□□□□□ -0.46
VPS18-201ENST00000220509 C8orf76Q96K31 380 aa12.17□□□□□ -0.46
VPS18-201ENST00000220509 ST7Q9NRC1 585 aa12.17□□□□□ -0.46
VPS18-201ENST00000220509 RAD50Q92878 1312 aa12.17□□□□□ -0.46
VPS18-201ENST00000220509 MST1RQ04912 1400 aa12.17□□□□□ -0.46
VPS18-201ENST00000220509 SMC2O95347 1197 aa12.17□□□□□ -0.46
VPS18-201ENST00000220509 TYRO3Q06418 890 aa12.17□□□□□ -0.46
VPS18-201ENST00000220509 TPD52L2O43399 206 aaKnown RBP12.17□□□□□ -0.46
VPS18-201ENST00000220509 POLR3DP05423 398 aaPredicted RBP12.17□□□□□ -0.46
VPS18-201ENST00000220509 NOP2P46087 812 aaKnown RBP12.17□□□□□ -0.46
VPS18-201ENST00000220509 MAP3K12Q12852 859 aa12.17□□□□□ -0.46
VPS18-201ENST00000220509 MICU3Q86XE3 530 aa12.17□□□□□ -0.46
VPS18-201ENST00000220509 ATL2Q8NHH9 583 aa12.17□□□□□ -0.46
VPS18-201ENST00000220509 NAT10Q9H0A0 1025 aaKnown RBP12.17□□□□□ -0.46
VPS18-201ENST00000220509 PPP1R12AO14974 1030 aaPredicted RBP12.16□□□□□ -0.46
VPS18-201ENST00000220509 CAND2O75155 1236 aa12.16□□□□□ -0.46
VPS18-201ENST00000220509 XBP1P17861 261 aa12.16□□□□□ -0.46
VPS18-201ENST00000220509 LIG1P18858 919 aa12.16□□□□□ -0.46
VPS18-201ENST00000220509 NCBP1Q09161 790 aaKnown RBP12.16□□□□□ -0.46
VPS18-201ENST00000220509 JRKLQ9Y4A0 524 aa12.16□□□□□ -0.46
VPS18-201ENST00000220509 A0A1B0GUL7 405 aa12.16□□□□□ -0.46
VPS18-201ENST00000220509 IPO7O95373 1038 aaKnown RBP12.16□□□□□ -0.46
VPS18-201ENST00000220509 SLC5A1P13866 664 aa12.16□□□□□ -0.46
VPS18-201ENST00000220509 RAD51AP2Q09MP3 1159 aa12.16□□□□□ -0.46
VPS18-201ENST00000220509 ACRBPQ8NEB7 543 aa12.16□□□□□ -0.46
VPS18-201ENST00000220509 FAM200AQ8TCP9 573 aa12.16□□□□□ -0.46
VPS18-201ENST00000220509 ZNF215Q9UL58 517 aaPredicted RBP12.16□□□□□ -0.46
VPS18-201ENST00000220509 PTH1RQ03431 593 aa12.16□□□□□ -0.46
VPS18-201ENST00000220509 SLC9C2Q5TAH2 1124 aa12.16□□□□□ -0.46
VPS18-201ENST00000220509 RUFY3Q7L099 469 aa12.16□□□□□ -0.46
VPS18-201ENST00000220509 DZIP3Q86Y13 1208 aaKnown RBP12.16□□□□□ -0.46
VPS18-201ENST00000220509 ERCC4Q92889 916 aaPredicted RBP12.16□□□□□ -0.46
VPS18-201ENST00000220509 INTS4Q96HW7 963 aaKnown RBP12.16□□□□□ -0.46
VPS18-201ENST00000220509 FEZ1Q99689 392 aa12.16□□□□□ -0.46
VPS18-201ENST00000220509 ZNF652Q9Y2D9 606 aa12.16□□□□□ -0.46
VPS18-201ENST00000220509 HSPA4P34932 840 aa12.15□□□□□ -0.46
VPS18-201ENST00000220509 CCDC24Q8N4L8 307 aa12.15□□□□□ -0.46
VPS18-201ENST00000220509 PROCA1Q8NCQ7 364 aaPredicted RBP12.15□□□□□ -0.46
VPS18-201ENST00000220509 PIGBQ92521 554 aa12.15□□□□□ -0.46
VPS18-201ENST00000220509 KCNF1Q9H3M0 494 aa12.15□□□□□ -0.46
VPS18-201ENST00000220509 HOOK1Q9UJC3 728 aaKnown RBP12.15□□□□□ -0.46
VPS18-201ENST00000220509 ITFG2Q969R8 447 aa12.15□□□□□ -0.46
VPS18-201ENST00000220509 BIN2Q9UBW5 565 aaPredicted RBP12.15□□□□□ -0.46
VPS18-201ENST00000220509 IRS4O14654 1257 aaPredicted RBP12.15□□□□□ -0.46
VPS18-201ENST00000220509 SKILP12757 684 aa12.15□□□□□ -0.46
VPS18-201ENST00000220509 ORC3Q9UBD5 711 aaPredicted RBP12.15□□□□□ -0.46
VPS18-201ENST00000220509 KLF18A0A0U1RQI7 1052 aa12.14□□□□□ -0.47
VPS18-201ENST00000220509 EYA2O00167 538 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms