RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 CCT6AP40227 531 aaKnown RBP16.92■□□□□ 0.3
NDFIP2-201ENST00000218652 PRPHP41219 470 aa16.92■□□□□ 0.3
NDFIP2-201ENST00000218652 HS2ST1Q7LGA3 356 aa16.92■□□□□ 0.3
NDFIP2-201ENST00000218652 NBPF11Q86T75 865 aa16.92■□□□□ 0.3
NDFIP2-201ENST00000218652 CCDC63Q8NA47 563 aa16.92■□□□□ 0.3
NDFIP2-201ENST00000218652 LMBR1Q8WVP7 490 aa16.92■□□□□ 0.3
NDFIP2-201ENST00000218652 DDX12PQ92771 950 aa16.92■□□□□ 0.3
NDFIP2-201ENST00000218652 BAG1Q99933 345 aaPredicted RBP16.92■□□□□ 0.3
NDFIP2-201ENST00000218652 CCDC141Q6ZP82 1450 aa16.92■□□□□ 0.3
NDFIP2-201ENST00000218652 SCAF11Q99590 1463 aaKnown RBP16.92■□□□□ 0.3
NDFIP2-201ENST00000218652 ATP6V0A2Q9Y487 856 aa16.92■□□□□ 0.3
NDFIP2-201ENST00000218652 CALML3P27482 149 aa16.92■□□□□ 0.3
NDFIP2-201ENST00000218652 NOS1P29475 1434 aa16.92■□□□□ 0.3
NDFIP2-201ENST00000218652 AKNAD1Q5T1N1 836 aa16.92■□□□□ 0.3
NDFIP2-201ENST00000218652 KCNK9Q9NPC2 374 aa16.92■□□□□ 0.3
NDFIP2-201ENST00000218652 PICALMQ13492 652 aa16.91■□□□□ 0.3
NDFIP2-201ENST00000218652 CCDC129Q6ZRS4 1044 aa16.91■□□□□ 0.3
NDFIP2-201ENST00000218652 ZNF622Q969S3 477 aaKnown RBP eCLIP16.91■□□□□ 0.34e-6■□□□□ 11.1
NDFIP2-201ENST00000218652 C6orf50Q9HD87 102 aa16.91■□□□□ 0.3
NDFIP2-201ENST00000218652 CALM1P0DP23 149 aa16.91■□□□□ 0.3
NDFIP2-201ENST00000218652 CALM2P0DP24 149 aa16.91■□□□□ 0.3
NDFIP2-201ENST00000218652 CALM3P0DP25 149 aa16.91■□□□□ 0.3
NDFIP2-201ENST00000218652 WDHD1O75717 1129 aaPredicted RBP16.9■□□□□ 0.3
NDFIP2-201ENST00000218652 RUFY3Q7L099 469 aa16.9■□□□□ 0.3
NDFIP2-201ENST00000218652 TTC14Q96N46 770 aa16.9■□□□□ 0.3
NDFIP2-201ENST00000218652 OGFRQ9NZT2 677 aa16.9■□□□□ 0.3
NDFIP2-201ENST00000218652 ZRANB1Q9UGI0 708 aa16.9■□□□□ 0.3
NDFIP2-201ENST00000218652 DTHD1Q6ZMT9 781 aa16.9■□□□□ 0.3
NDFIP2-201ENST00000218652 CCDC50Q8IVM0 306 aa16.9■□□□□ 0.3
NDFIP2-201ENST00000218652 RNF123Q5XPI4 1314 aa16.9■□□□□ 0.3
NDFIP2-201ENST00000218652 DPH6Q7L8W6 267 aa16.9■□□□□ 0.3
NDFIP2-201ENST00000218652 CNGA4Q8IV77 575 aa16.9■□□□□ 0.3
NDFIP2-201ENST00000218652 OTUD7AQ8TE49 926 aaPredicted RBP16.9■□□□□ 0.3
NDFIP2-201ENST00000218652 ZKSCAN3Q9BRR0 538 aa16.9■□□□□ 0.3
NDFIP2-201ENST00000218652 MCM9Q9NXL9 1143 aa16.9■□□□□ 0.3
NDFIP2-201ENST00000218652 TTC41PQ6P2S7 1318 aa16.9■□□□□ 0.3
NDFIP2-201ENST00000218652 VWA3AA6NCI4 1184 aa16.9■□□□□ 0.3
NDFIP2-201ENST00000218652 TUBBP07437 444 aa16.9■□□□□ 0.3
NDFIP2-201ENST00000218652 BRAPQ7Z569 592 aa16.9■□□□□ 0.3
NDFIP2-201ENST00000218652 IMPG2Q9BZV3 1241 aa16.9■□□□□ 0.3
NDFIP2-201ENST00000218652 VPS16Q9H269 839 aa16.9■□□□□ 0.3
NDFIP2-201ENST00000218652 MAPK8IP1Q9UQF2 711 aa16.9■□□□□ 0.3
NDFIP2-201ENST00000218652 RNASE9P60153 205 aaKnown RBP16.89■□□□□ 0.29
NDFIP2-201ENST00000218652 SMARCC2Q8TAQ2 1214 aa16.89■□□□□ 0.29
NDFIP2-201ENST00000218652 FAM76AQ8TAV0 307 aa16.89■□□□□ 0.29
NDFIP2-201ENST00000218652 RPRD2Q5VT52 1461 aaKnown RBP16.89■□□□□ 0.29
NDFIP2-201ENST00000218652 MAP3K1Q13233 1512 aa16.89■□□□□ 0.29
NDFIP2-201ENST00000218652 RNF113AO15541 343 aaKnown RBP16.89■□□□□ 0.29
NDFIP2-201ENST00000218652 RFC4P35249 363 aa16.89■□□□□ 0.29
NDFIP2-201ENST00000218652 PPARDQ03181 441 aa16.89■□□□□ 0.29
NDFIP2-201ENST00000218652 FAM160A1Q05DH4 1040 aa16.89■□□□□ 0.29
NDFIP2-201ENST00000218652 TBC1D8BQ0IIM8 1120 aa16.89■□□□□ 0.29
NDFIP2-201ENST00000218652 TTC31Q49AM3 519 aaPredicted RBP16.89■□□□□ 0.29
NDFIP2-201ENST00000218652 PHACTR3Q96KR7 559 aa16.89■□□□□ 0.29
NDFIP2-201ENST00000218652 NLRP3Q96P20 1036 aa16.89■□□□□ 0.29
NDFIP2-201ENST00000218652 POLKQ9UBT6 870 aa16.89■□□□□ 0.29
NDFIP2-201ENST00000218652 ANKRD36BQ8N2N9 1353 aa16.89■□□□□ 0.29
NDFIP2-201ENST00000218652 TUBB4BP68371 445 aa16.89■□□□□ 0.29
NDFIP2-201ENST00000218652 RAPGEF1Q13905 1077 aa16.89■□□□□ 0.29
NDFIP2-201ENST00000218652 STMN4Q9H169 189 aaPredicted RBP16.89■□□□□ 0.29
NDFIP2-201ENST00000218652 BICDL2A1A5D9 508 aa16.89■□□□□ 0.29
NDFIP2-201ENST00000218652 AKR1B15C9JRZ8 316 aaPredicted RBP16.89■□□□□ 0.29
NDFIP2-201ENST00000218652 EIF4A2Q14240 407 aaKnown RBP16.89■□□□□ 0.29
NDFIP2-201ENST00000218652 MTHFSDQ2M296 383 aaKnown RBP16.89■□□□□ 0.29
NDFIP2-201ENST00000218652 RABEP2Q9H5N1 569 aa16.89■□□□□ 0.29
NDFIP2-201ENST00000218652 HPDP32754 393 aaPredicted RBP16.88■□□□□ 0.29
NDFIP2-201ENST00000218652 ERO1AQ96HE7 468 aa16.88■□□□□ 0.29
NDFIP2-201ENST00000218652 CALCOCO2Q13137 446 aa16.88■□□□□ 0.29
NDFIP2-201ENST00000218652 PLS1Q14651 629 aa16.88■□□□□ 0.29
NDFIP2-201ENST00000218652 ZNF354CQ86Y25 554 aa16.88■□□□□ 0.29
NDFIP2-201ENST00000218652 SREK1Q8WXA9 508 aaKnown RBP16.88■□□□□ 0.29
NDFIP2-201ENST00000218652 CARD6Q9BX69 1037 aa16.88■□□□□ 0.29
NDFIP2-201ENST00000218652 RIOK3O14730 519 aaKnown RBP16.88■□□□□ 0.29
NDFIP2-201ENST00000218652 HDXQ7Z353 690 aa16.88■□□□□ 0.29
NDFIP2-201ENST00000218652 TMEM87AQ8NBN3 555 aa16.88■□□□□ 0.29
NDFIP2-201ENST00000218652 SOS1Q07889 1333 aaPredicted RBP16.88■□□□□ 0.29
NDFIP2-201ENST00000218652 TIMM10P62072 90 aa16.87■□□□□ 0.29
NDFIP2-201ENST00000218652 GSTO1P78417 241 aa16.87■□□□□ 0.29
NDFIP2-201ENST00000218652 TFCP2Q12800 502 aa16.87■□□□□ 0.29
NDFIP2-201ENST00000218652 IGSF22Q8N9C0 903 aa16.87■□□□□ 0.29
NDFIP2-201ENST00000218652 MTRF1LQ9UGC7 380 aaKnown RBP16.87■□□□□ 0.29
NDFIP2-201ENST00000218652 CEP83Q9Y592 693 aa16.87■□□□□ 0.29
NDFIP2-201ENST00000218652 TNNC1P63316 161 aa16.87■□□□□ 0.29
NDFIP2-201ENST00000218652 FAM212AQ96EL1 285 aa16.87■□□□□ 0.29
NDFIP2-201ENST00000218652 SPDYE3A6NKU9 549 aa16.87■□□□□ 0.29
NDFIP2-201ENST00000218652 TRAF5O00463 557 aa16.87■□□□□ 0.29
NDFIP2-201ENST00000218652 KRT2P35908 639 aa16.87■□□□□ 0.29
NDFIP2-201ENST00000218652 PSMC4P43686 418 aa16.87■□□□□ 0.29
NDFIP2-201ENST00000218652 ZNF174Q15697 407 aa16.87■□□□□ 0.29
NDFIP2-201ENST00000218652 NFATC2IPQ8NCF5 419 aa16.87■□□□□ 0.29
NDFIP2-201ENST00000218652 STIM2Q9P246 746 aa16.87■□□□□ 0.29
NDFIP2-201ENST00000218652 NESP48681 1621 aa16.87■□□□□ 0.29
NDFIP2-201ENST00000218652 LEO1Q8WVC0 666 aaPredicted RBP16.87■□□□□ 0.29
NDFIP2-201ENST00000218652 SAMD15Q9P1V8 674 aa16.87■□□□□ 0.29
NDFIP2-201ENST00000218652 NIP7Q9Y221 180 aaKnown RBP eCLIP16.87■□□□□ 0.29
NDFIP2-201ENST00000218652 POGZQ7Z3K3 1410 aa16.86■□□□□ 0.29
NDFIP2-201ENST00000218652 MAGEB6P1A0A0J9YX57 407 aa16.86■□□□□ 0.29
NDFIP2-201ENST00000218652 PABPN1LA6NDY0 278 aaKnown RBP16.86■□□□□ 0.29
NDFIP2-201ENST00000218652 NDUFAB1O14561 156 aa16.86■□□□□ 0.29
NDFIP2-201ENST00000218652 IRX5P78411 483 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms