RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 TMED8Q6PL24 325 aaPredicted RBP11.84□□□□□ -0.51
USP11-201ENST00000218348 NLRP10Q86W26 655 aa11.84□□□□□ -0.51
USP11-201ENST00000218348 ZSWIM6Q9HCJ5 1215 aa11.84□□□□□ -0.51
USP11-201ENST00000218348 ZNF609O15014 1411 aa11.84□□□□□ -0.51
USP11-201ENST00000218348 MRE11P49959 708 aa11.84□□□□□ -0.51
USP11-201ENST00000218348 CCT2P78371 535 aaKnown RBP11.84□□□□□ -0.51
USP11-201ENST00000218348 ST3GAL1Q11201 340 aa11.84□□□□□ -0.51
USP11-201ENST00000218348 MCMDC2Q4G0Z9 681 aa11.84□□□□□ -0.51
USP11-201ENST00000218348 GIGYF2Q6Y7W6 1299 aaKnown RBP11.84□□□□□ -0.51
USP11-201ENST00000218348 RNF216Q9NWF9 866 aaPredicted RBP11.84□□□□□ -0.51
USP11-201ENST00000218348 JAK2O60674 1132 aa11.83□□□□□ -0.52
USP11-201ENST00000218348 ZNF34Q8IZ26 560 aa11.83□□□□□ -0.52
USP11-201ENST00000218348 KBTBD3Q8NAB2 608 aa11.83□□□□□ -0.52
USP11-201ENST00000218348 BRF1Q92994 677 aa11.83□□□□□ -0.52
USP11-201ENST00000218348 PDGFDQ9GZP0 370 aaPredicted RBP11.83□□□□□ -0.52
USP11-201ENST00000218348 LRRC37AA6NMS7 1700 aa11.83□□□□□ -0.52
USP11-201ENST00000218348 LTBP1Q14766 1721 aa11.83□□□□□ -0.52
USP11-201ENST00000218348 RIC1Q4ADV7 1423 aa11.83□□□□□ -0.52
USP11-201ENST00000218348 CHRM1P11229 460 aaPredicted RBP11.83□□□□□ -0.52
USP11-201ENST00000218348 DNM1Q05193 864 aaKnown RBP11.83□□□□□ -0.52
USP11-201ENST00000218348 SLC15A2Q16348 729 aa11.83□□□□□ -0.52
USP11-201ENST00000218348 COL23A1Q86Y22 540 aaPredicted RBP11.83□□□□□ -0.52
USP11-201ENST00000218348 CHMP4CQ96CF2 233 aa11.83□□□□□ -0.52
USP11-201ENST00000218348 SEC31BQ9NQW1 1179 aa11.83□□□□□ -0.52
USP11-201ENST00000218348 GPHNQ9NQX3 736 aaPredicted RBP11.83□□□□□ -0.52
USP11-201ENST00000218348 TFIP11Q9UBB9 837 aaKnown RBP11.83□□□□□ -0.52
USP11-201ENST00000218348 IDH1O75874 414 aaKnown RBP11.83□□□□□ -0.52
USP11-201ENST00000218348 CEBPZQ03701 1054 aaKnown RBP11.83□□□□□ -0.52
USP11-201ENST00000218348 CCDC158Q5M9N0 1113 aa11.83□□□□□ -0.52
USP11-201ENST00000218348 LARP1BQ659C4 914 aaKnown RBP11.83□□□□□ -0.52
USP11-201ENST00000218348 Q6ZUG5 572 aa11.83□□□□□ -0.52
USP11-201ENST00000218348 ZBTB38Q8NAP3 1195 aaPredicted RBP11.83□□□□□ -0.52
USP11-201ENST00000218348 ZBTB9Q96C00 473 aa11.83□□□□□ -0.52
USP11-201ENST00000218348 INTS4Q96HW7 963 aaKnown RBP11.83□□□□□ -0.52
USP11-201ENST00000218348 NARFQ9UHQ1 456 aa11.83□□□□□ -0.52
USP11-201ENST00000218348 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.83□□□□□ -0.52
USP11-201ENST00000218348 WDR33Q9C0J8 1336 aaKnown RBP11.82□□□□□ -0.52
USP11-201ENST00000218348 PATL2C9JE40 543 aaKnown RBP11.82□□□□□ -0.52
USP11-201ENST00000218348 TRIM28Q13263 835 aaKnown RBP11.82□□□□□ -0.52
USP11-201ENST00000218348 TTLL11Q8NHH1 800 aa11.82□□□□□ -0.52
USP11-201ENST00000218348 M0R2C6 588 aa11.82□□□□□ -0.52
USP11-201ENST00000218348 BAG6P46379 1132 aa11.82□□□□□ -0.52
USP11-201ENST00000218348 DNTTIP2Q5QJE6 756 aaKnown RBP11.82□□□□□ -0.52
USP11-201ENST00000218348 RGS22Q8NE09 1264 aa11.82□□□□□ -0.52
USP11-201ENST00000218348 NEK1Q96PY6 1258 aa11.82□□□□□ -0.52
USP11-201ENST00000218348 NCOA5Q9HCD5 579 aaKnown RBP11.82□□□□□ -0.52
USP11-201ENST00000218348 UTRNP46939 3433 aa11.82□□□□□ -0.52
USP11-201ENST00000218348 GNPATO15228 680 aa11.81□□□□□ -0.52
USP11-201ENST00000218348 APPP05067 770 aa11.81□□□□□ -0.52
USP11-201ENST00000218348 GYS1P13807 737 aa11.81□□□□□ -0.52
USP11-201ENST00000218348 PSMA5P28066 241 aa11.81□□□□□ -0.52
USP11-201ENST00000218348 NASPP49321 788 aaPredicted RBP11.81□□□□□ -0.52
USP11-201ENST00000218348 GUCY1B3Q02153 619 aa11.81□□□□□ -0.52
USP11-201ENST00000218348 ATP2B3Q16720 1220 aa11.81□□□□□ -0.52
USP11-201ENST00000218348 STOX1Q6ZVD7 989 aa11.81□□□□□ -0.52
USP11-201ENST00000218348 OSBP2Q969R2 916 aa11.81□□□□□ -0.52
USP11-201ENST00000218348 RPAP1Q9BWH6 1393 aaPredicted RBP11.81□□□□□ -0.52
USP11-201ENST00000218348 WTIPA6NIX2 430 aaPredicted RBP11.81□□□□□ -0.52
USP11-201ENST00000218348 ZSCAN22P10073 491 aaPredicted RBP11.81□□□□□ -0.52
USP11-201ENST00000218348 RPS6KB1P23443 525 aa11.81□□□□□ -0.52
USP11-201ENST00000218348 TM4SF1P30408 202 aa11.81□□□□□ -0.52
USP11-201ENST00000218348 SGIP1Q9BQI5 828 aa11.81□□□□□ -0.52
USP11-201ENST00000218348 RBSNQ9H1K0 784 aa11.81□□□□□ -0.52
USP11-201ENST00000218348 PCCAP05165 728 aaPredicted RBP11.81□□□□□ -0.52
USP11-201ENST00000218348 APOBRQ0VD83 1088 aa11.81□□□□□ -0.52
USP11-201ENST00000218348 TOB2Q14106 344 aaPredicted RBP11.81□□□□□ -0.52
USP11-201ENST00000218348 CDC37L1Q7L3B6 337 aa11.81□□□□□ -0.52
USP11-201ENST00000218348 CNKSR2Q8WXI2 1034 aa11.81□□□□□ -0.52
USP11-201ENST00000218348 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.8□□□□□ -0.52
USP11-201ENST00000218348 ANKRD18BA2A2Z9 1011 aa11.8□□□□□ -0.52
USP11-201ENST00000218348 PLCB2Q00722 1185 aa11.8□□□□□ -0.52
USP11-201ENST00000218348 SUSD4Q5VX71 490 aa11.8□□□□□ -0.52
USP11-201ENST00000218348 BCCIPQ9P287 314 aaKnown RBP eCLIP11.8□□□□□ -0.52
USP11-201ENST00000218348 SRP68Q9UHB9 627 aaKnown RBP11.8□□□□□ -0.52
USP11-201ENST00000218348 TCHHQ07283 1943 aa11.8□□□□□ -0.52
USP11-201ENST00000218348 MYCNP04198 464 aaPredicted RBP11.8□□□□□ -0.52
USP11-201ENST00000218348 CTSWP56202 376 aa11.8□□□□□ -0.52
USP11-201ENST00000218348 CLEC4GQ6UXB4 293 aa11.8□□□□□ -0.52
USP11-201ENST00000218348 NIP7Q9Y221 180 aaKnown RBP eCLIP11.8□□□□□ -0.52
USP11-201ENST00000218348 MED23Q9ULK4 1368 aa11.8□□□□□ -0.52
USP11-201ENST00000218348 MAST3O60307 1309 aa11.8□□□□□ -0.52
USP11-201ENST00000218348 PHKA1P46020 1223 aa11.8□□□□□ -0.52
USP11-201ENST00000218348 IRX3P78415 501 aaPredicted RBP11.8□□□□□ -0.52
USP11-201ENST00000218348 DENND2AQ9ULE3 1009 aa11.8□□□□□ -0.52
USP11-201ENST00000218348 F13A1P00488 732 aa11.79□□□□□ -0.52
USP11-201ENST00000218348 HSPD1P10809 573 aaKnown RBP11.79□□□□□ -0.52
USP11-201ENST00000218348 TRIM44Q96DX7 344 aaPredicted RBP11.79□□□□□ -0.52
USP11-201ENST00000218348 PUS7LQ9H0K6 701 aaKnown RBP11.79□□□□□ -0.52
USP11-201ENST00000218348 TAF1P21675 1872 aa11.79□□□□□ -0.52
USP11-201ENST00000218348 SPEF2Q9C093 1822 aa11.78□□□□□ -0.52
USP11-201ENST00000218348 RNF113AO15541 343 aaKnown RBP11.78□□□□□ -0.52
USP11-201ENST00000218348 CLEC17AQ6ZS10 378 aa11.78□□□□□ -0.52
USP11-201ENST00000218348 SMAP1Q8IYB5 467 aaPredicted RBP11.78□□□□□ -0.52
USP11-201ENST00000218348 MTMR6Q9Y217 621 aa11.78□□□□□ -0.52
USP11-201ENST00000218348 RTCBQ9Y3I0 505 aaKnown RBP11.78□□□□□ -0.52
USP11-201ENST00000218348 PTMSP20962 102 aa11.78□□□□□ -0.52
USP11-201ENST00000218348 MCAMP43121 646 aa11.78□□□□□ -0.52
USP11-201ENST00000218348 TBC1D9BQ66K14 1250 aa11.78□□□□□ -0.52
USP11-201ENST00000218348 MPHOSPH8Q99549 860 aa11.78□□□□□ -0.52
USP11-201ENST00000218348 INCENPQ9NQS7 918 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms