RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 WWC3Q9ULE0 1092 aa9.43□□□□□ -0.9
HMGXB4-201ENST00000216106 ZNF652Q9Y2D9 606 aa9.43□□□□□ -0.9
HMGXB4-201ENST00000216106 ZNF532Q9HCE3 1301 aa9.43□□□□□ -0.9
HMGXB4-201ENST00000216106 VPS72Q15906 364 aa9.43□□□□□ -0.9
HMGXB4-201ENST00000216106 ZSCAN25Q6NSZ9 544 aa9.43□□□□□ -0.9
HMGXB4-201ENST00000216106 RNF214Q8ND24 703 aa9.43□□□□□ -0.9
HMGXB4-201ENST00000216106 ANP32BQ92688 251 aaKnown RBP9.43□□□□□ -0.9
HMGXB4-201ENST00000216106 RRAGDQ9NQL2 400 aaPredicted RBP9.43□□□□□ -0.9
HMGXB4-201ENST00000216106 GPHNQ9NQX3 736 aaPredicted RBP9.43□□□□□ -0.9
HMGXB4-201ENST00000216106 UQCRFS1P1P0C7P4 283 aa9.42□□□□□ -0.9
HMGXB4-201ENST00000216106 PDIA4P13667 645 aaKnown RBP9.42□□□□□ -0.9
HMGXB4-201ENST00000216106 IGHMBP2P38935 993 aaKnown RBP9.42□□□□□ -0.9
HMGXB4-201ENST00000216106 FOSBP53539 338 aa9.42□□□□□ -0.9
HMGXB4-201ENST00000216106 KRT85P78386 507 aa9.42□□□□□ -0.9
HMGXB4-201ENST00000216106 RASGRF1Q13972 1273 aa9.42□□□□□ -0.9
HMGXB4-201ENST00000216106 CSPP1Q1MSJ5 1256 aa9.42□□□□□ -0.9
HMGXB4-201ENST00000216106 EP400Q96L91 3159 aa9.42□□□□□ -0.9
HMGXB4-201ENST00000216106 ATRNO75882 1429 aa9.42□□□□□ -0.9
HMGXB4-201ENST00000216106 PDE6AP16499 860 aa9.42□□□□□ -0.9
HMGXB4-201ENST00000216106 FAM182BQ5T319 152 aa9.42□□□□□ -0.9
HMGXB4-201ENST00000216106 BICDL1Q6ZP65 573 aa9.42□□□□□ -0.9
HMGXB4-201ENST00000216106 FAM184AQ8NB25 1140 aa9.42□□□□□ -0.9
HMGXB4-201ENST00000216106 SPATA5Q8NB90 893 aa9.42□□□□□ -0.9
HMGXB4-201ENST00000216106 NSUN7Q8NE18 718 aaKnown RBP9.42□□□□□ -0.9
HMGXB4-201ENST00000216106 PHF14O94880 888 aa9.42□□□□□ -0.9
HMGXB4-201ENST00000216106 CTDNEP1O95476 244 aa9.42□□□□□ -0.9
HMGXB4-201ENST00000216106 CCDC173Q0VFZ6 552 aa9.42□□□□□ -0.9
HMGXB4-201ENST00000216106 TTC6Q86TZ1 520 aa9.42□□□□□ -0.9
HMGXB4-201ENST00000216106 TRIM44Q96DX7 344 aaPredicted RBP9.42□□□□□ -0.9
HMGXB4-201ENST00000216106 DOCK2Q92608 1830 aa9.42□□□□□ -0.9
HMGXB4-201ENST00000216106 ZNF831Q5JPB2 1677 aa9.42□□□□□ -0.9
HMGXB4-201ENST00000216106 PTPDC1A2A3K4 754 aa9.41□□□□□ -0.9
HMGXB4-201ENST00000216106 H3BQV1 296 aa9.41□□□□□ -0.9
HMGXB4-201ENST00000216106 ZNF213O14771 459 aa9.41□□□□□ -0.9
HMGXB4-201ENST00000216106 APPP05067 770 aa9.41□□□□□ -0.9
HMGXB4-201ENST00000216106 CCDC183Q5T5S1 534 aa9.41□□□□□ -0.9
HMGXB4-201ENST00000216106 IFFO2Q5TF58 517 aa9.41□□□□□ -0.9
HMGXB4-201ENST00000216106 SMARCC2Q8TAQ2 1214 aa9.41□□□□□ -0.9
HMGXB4-201ENST00000216106 BTAF1O14981 1849 aa9.41□□□□□ -0.9
HMGXB4-201ENST00000216106 PDIA3P30101 505 aaKnown RBP9.41□□□□□ -0.9
HMGXB4-201ENST00000216106 ERFEQ4G0M1 354 aa9.41□□□□□ -0.9
HMGXB4-201ENST00000216106 C3orf67Q6ZVT6 689 aa9.41□□□□□ -0.9
HMGXB4-201ENST00000216106 TSPY26PQ9H489 355 aa9.41□□□□□ -0.9
HMGXB4-201ENST00000216106 BCAMP50895 628 aa9.41□□□□□ -0.9
HMGXB4-201ENST00000216106 CHRNDQ07001 517 aa9.41□□□□□ -0.9
HMGXB4-201ENST00000216106 UBE3CQ15386 1083 aa9.41□□□□□ -0.9
HMGXB4-201ENST00000216106 TFIP11Q9UBB9 837 aaKnown RBP9.41□□□□□ -0.9
HMGXB4-201ENST00000216106 RTL9Q8NET4 1388 aa9.41□□□□□ -0.9
HMGXB4-201ENST00000216106 TCRBV5S4A2TA0A5A2 114 aa9.4□□□□□ -0.9
HMGXB4-201ENST00000216106 PRC1O43663 620 aa9.4□□□□□ -0.9
HMGXB4-201ENST00000216106 CLEC4GQ6UXB4 293 aa9.4□□□□□ -0.9
HMGXB4-201ENST00000216106 RALYLQ86SE5 291 aaKnown RBP9.4□□□□□ -0.9
HMGXB4-201ENST00000216106 MB21D2Q8IYB1 491 aaPredicted RBP9.4□□□□□ -0.9
HMGXB4-201ENST00000216106 MAGEB6Q8N7X4 407 aa9.4□□□□□ -0.9
HMGXB4-201ENST00000216106 LLPHQ9BRT6 129 aaKnown RBP9.4□□□□□ -0.9
HMGXB4-201ENST00000216106 DENND2AQ9ULE3 1009 aa9.4□□□□□ -0.9
HMGXB4-201ENST00000216106 SCN7AQ01118 1682 aa9.4□□□□□ -0.9
HMGXB4-201ENST00000216106 NCOA7Q8NI08 942 aa9.4□□□□□ -0.9
HMGXB4-201ENST00000216106 AIDAQ96BJ3 306 aa9.4□□□□□ -0.9
HMGXB4-201ENST00000216106 NBPF3Q9H094 633 aa9.4□□□□□ -0.9
HMGXB4-201ENST00000216106 MCM5P33992 734 aa9.4□□□□□ -0.9
HMGXB4-201ENST00000216106 ANTXR2P58335 489 aa9.4□□□□□ -0.9
HMGXB4-201ENST00000216106 RAB11FIP4Q86YS3 637 aa9.4□□□□□ -0.9
HMGXB4-201ENST00000216106 ZNF274Q96GC6 653 aaPredicted RBP9.4□□□□□ -0.9
HMGXB4-201ENST00000216106 PPP1R9BQ96SB3 815 aa9.4□□□□□ -0.9
HMGXB4-201ENST00000216106 USP21Q9UK80 565 aa9.4□□□□□ -0.9
HMGXB4-201ENST00000216106 A0A1B0GUL6 1792 aa9.4□□□□□ -0.91
HMGXB4-201ENST00000216106 MYH15Q9Y2K3 1946 aa9.4□□□□□ -0.91
HMGXB4-201ENST00000216106 RESTQ13127 1097 aa9.4□□□□□ -0.91
HMGXB4-201ENST00000216106 TBC1D9BQ66K14 1250 aa9.4□□□□□ -0.91
HMGXB4-201ENST00000216106 TBC1D10CQ8IV04 446 aa9.4□□□□□ -0.91
HMGXB4-201ENST00000216106 IQSEC3Q9UPP2 1182 aaPredicted RBP9.4□□□□□ -0.91
HMGXB4-201ENST00000216106 HMGN5P82970 282 aaKnown RBP9.39□□□□□ -0.91
HMGXB4-201ENST00000216106 MAP3K12Q12852 859 aa9.39□□□□□ -0.91
HMGXB4-201ENST00000216106 FNBP4Q8N3X1 1017 aaPredicted RBP9.39□□□□□ -0.91
HMGXB4-201ENST00000216106 SPATA32Q96LK8 384 aa9.39□□□□□ -0.91
HMGXB4-201ENST00000216106 CDC5LQ99459 802 aaKnown RBP9.39□□□□□ -0.91
HMGXB4-201ENST00000216106 CNTNAP4Q9C0A0 1308 aa9.39□□□□□ -0.91
HMGXB4-201ENST00000216106 SALL1Q9NSC2 1324 aa9.39□□□□□ -0.91
HMGXB4-201ENST00000216106 KLF18A0A0U1RQI7 1052 aa9.39□□□□□ -0.91
HMGXB4-201ENST00000216106 WTIPA6NIX2 430 aaPredicted RBP9.39□□□□□ -0.91
HMGXB4-201ENST00000216106 GTF2E1P29083 439 aaPredicted RBP9.39□□□□□ -0.91
HMGXB4-201ENST00000216106 NKX2-3Q8TAU0 364 aa9.39□□□□□ -0.91
HMGXB4-201ENST00000216106 SRP68Q9UHB9 627 aaKnown RBP9.39□□□□□ -0.91
HMGXB4-201ENST00000216106 CHD4Q14839 1912 aa9.39□□□□□ -0.91
HMGXB4-201ENST00000216106 GOLGA8BA8MQT2 603 aa9.39□□□□□ -0.91
HMGXB4-201ENST00000216106 MBD4O95243 580 aa9.39□□□□□ -0.91
HMGXB4-201ENST00000216106 FBXL16Q8N461 479 aa9.39□□□□□ -0.91
HMGXB4-201ENST00000216106 STRBPQ96SI9 672 aaKnown RBP9.39□□□□□ -0.91
HMGXB4-201ENST00000216106 SCAND2PQ9GZW5 306 aaPredicted RBP9.39□□□□□ -0.91
HMGXB4-201ENST00000216106 BCL2L12Q9HB09 334 aa9.39□□□□□ -0.91
HMGXB4-201ENST00000216106 ELP1O95163 1332 aa9.39□□□□□ -0.91
HMGXB4-201ENST00000216106 GNPATO15228 680 aa9.38□□□□□ -0.91
HMGXB4-201ENST00000216106 GUCY1B3Q02153 619 aa9.38□□□□□ -0.91
HMGXB4-201ENST00000216106 TRDNQ13061 729 aa9.38□□□□□ -0.91
HMGXB4-201ENST00000216106 GIMAP6Q6P9H5 292 aa9.38□□□□□ -0.91
HMGXB4-201ENST00000216106 ANKRD18AQ8IVF6 992 aa9.38□□□□□ -0.91
HMGXB4-201ENST00000216106 LEO1Q8WVC0 666 aaPredicted RBP9.38□□□□□ -0.91
HMGXB4-201ENST00000216106 CARMIL3Q8ND23 1372 aa9.38□□□□□ -0.91
HMGXB4-201ENST00000216106 NHSQ6T4R5 1651 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms