RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 OR7C1O76099 320 aaPredicted RBP9.42□□□□□ -0.9
SNIP1-204ENST00000638725 VAMP5O95183 116 aa9.42□□□□□ -0.9
SNIP1-204ENST00000638725 TCN2P20062 427 aa9.42□□□□□ -0.9
SNIP1-204ENST00000638725 CDX1P47902 265 aaPredicted RBP9.42□□□□□ -0.9
SNIP1-204ENST00000638725 ERVFRD-1P60508 538 aa9.42□□□□□ -0.9
SNIP1-204ENST00000638725 ELOBQ15370 118 aa9.42□□□□□ -0.9
SNIP1-204ENST00000638725 SPIN3Q5JUX0 258 aa9.42□□□□□ -0.9
SNIP1-204ENST00000638725 TBC1D26Q86UD7 250 aa9.42□□□□□ -0.9
SNIP1-204ENST00000638725 ZNF695Q8IW36 515 aa9.42□□□□□ -0.9
SNIP1-204ENST00000638725 CYB561D1Q8N8Q1 229 aa9.42□□□□□ -0.9
SNIP1-204ENST00000638725 OR1F12Q8NHA8 337 aa9.42□□□□□ -0.9
SNIP1-204ENST00000638725 PLEKHF2Q9H8W4 249 aa9.42□□□□□ -0.9
SNIP1-204ENST00000638725 SLC7A10Q9NS82 523 aa9.42□□□□□ -0.9
SNIP1-204ENST00000638725 ADAM20O43506 726 aa9.42□□□□□ -0.9
SNIP1-204ENST00000638725 SCAF4O95104 1147 aaKnown RBP9.42□□□□□ -0.9
SNIP1-204ENST00000638725 ZNF32P17041 273 aa9.42□□□□□ -0.9
SNIP1-204ENST00000638725 GNRHRP30968 328 aa9.42□□□□□ -0.9
SNIP1-204ENST00000638725 NTF4P34130 210 aa9.42□□□□□ -0.9
SNIP1-204ENST00000638725 RGS19P49795 217 aa9.42□□□□□ -0.9
SNIP1-204ENST00000638725 DYNLT3P51808 116 aa9.42□□□□□ -0.9
SNIP1-204ENST00000638725 RBM11P57052 281 aaKnown RBP9.42□□□□□ -0.9
SNIP1-204ENST00000638725 ICAM4Q14773 271 aa9.42□□□□□ -0.9
SNIP1-204ENST00000638725 DAZAP2Q15038 168 aaPredicted RBP9.42□□□□□ -0.9
SNIP1-204ENST00000638725 TMEM42Q69YG0 159 aa9.42□□□□□ -0.9
SNIP1-204ENST00000638725 SPNS3Q6ZMD2 512 aa9.42□□□□□ -0.9
SNIP1-204ENST00000638725 ZNF429Q86V71 674 aa9.42□□□□□ -0.9
SNIP1-204ENST00000638725 PIGCQ92535 297 aa9.42□□□□□ -0.9
SNIP1-204ENST00000638725 LYRM2Q9NU23 88 aaPredicted RBP9.42□□□□□ -0.9
SNIP1-204ENST00000638725 C19orf25Q9UFG5 118 aaPredicted RBP9.42□□□□□ -0.9
SNIP1-204ENST00000638725 DMRT1Q9Y5R6 373 aa9.42□□□□□ -0.9
SNIP1-204ENST00000638725 TGIF2-C20orf24A0A0A6YYL0 155 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 ZIC3O60481 467 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 NDUFS6O75380 124 aaKnown RBP9.41□□□□□ -0.9
SNIP1-204ENST00000638725 TMEM50AO95807 157 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 B4GALT1P15291 398 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 VAMP2P63027 116 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 PLCXD3Q63HM9 321 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 GUSBP11Q6P575 273 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 DPPA2Q7Z7J5 298 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 CALHM1Q8IU99 346 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 ZNF100Q8IYN0 542 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 NAT6Q93015 286 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 ALKBH3Q96Q83 286 aaPredicted RBP9.41□□□□□ -0.9
SNIP1-204ENST00000638725 UNKLQ9H9P5 680 aaKnown RBP9.41□□□□□ -0.9
SNIP1-204ENST00000638725 CRLF2Q9HC73 371 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 DKKL1Q9UK85 242 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 HS3ST3B1Q9Y662 390 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 A0A087WZY1 265 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 A0A1W2PQM1 296 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 HSPA12AO43301 675 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 GDF9O60383 454 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 LIFP15018 202 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 NPBWR2P48146 333 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 ZNF92Q03936 586 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 P4HA3Q7Z4N8 544 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 SELENOHQ8IZQ5 122 aaKnown RBP9.41□□□□□ -0.9
SNIP1-204ENST00000638725 GPR137CQ8N3F9 429 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 ZNF610Q8N9Z0 462 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 OR8G5Q8NG78 346 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 FGFBP3Q8TAT2 258 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 PROK2Q9HC23 129 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 WSB1Q9Y6I7 421 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 SDK2Q58EX2 2172 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 hCG_38984A0A1B0GV85 526 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 BCAT2O15382 392 aaPredicted RBP9.41□□□□□ -0.9
SNIP1-204ENST00000638725 SLC34A2O95436 690 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 FUT3P21217 361 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 SRPXP78539 464 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 ZNF154Q13106 437 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 PCOLCEQ15113 449 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 EXT1Q16394 746 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 ZNF468Q5VIY5 522 aaPredicted RBP9.41□□□□□ -0.9
SNIP1-204ENST00000638725 SP5Q6BEB4 398 aaPredicted RBP9.41□□□□□ -0.9
SNIP1-204ENST00000638725 TMEM211Q6ICI0 200 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 ZNF818PQ6ZRF7 136 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 SNIP1Q8TAD8 396 aaKnown RBP9.41□□□□□ -0.9
SNIP1-204ENST00000638725 INTS12Q96CB8 462 aaKnown RBP9.41□□□□□ -0.9
SNIP1-204ENST00000638725 TMEM56Q96MV1 263 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 SPIN2AQ99865 258 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 SPIN2BQ9BPZ2 258 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 SLC25A31Q9H0C2 315 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 WNT16Q9UBV4 365 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 TMEM56-RWDD3S4R434 201 aa9.41□□□□□ -0.9
SNIP1-204ENST00000638725 CEP192Q8TEP8 1941 aa9.4□□□□□ -0.9
SNIP1-204ENST00000638725 WDFY3Q8IZQ1 3526 aa9.4□□□□□ -0.9
SNIP1-204ENST00000638725 A0A087WWC5 75 aa9.4□□□□□ -0.9
SNIP1-204ENST00000638725 BTBD17A6NE02 478 aa9.4□□□□□ -0.9
SNIP1-204ENST00000638725 ZNF729A6NN14 1252 aaPredicted RBP9.4□□□□□ -0.9
SNIP1-204ENST00000638725 ZNF732B4DXR9 585 aa9.4□□□□□ -0.9
SNIP1-204ENST00000638725 WRBO00258 174 aa9.4□□□□□ -0.9
SNIP1-204ENST00000638725 TOX3O15405 576 aaPredicted RBP9.4□□□□□ -0.9
SNIP1-204ENST00000638725 S100A2P29034 98 aa9.4□□□□□ -0.9
SNIP1-204ENST00000638725 FUT6P51993 359 aa9.4□□□□□ -0.9
SNIP1-204ENST00000638725 DSCR4P56555 118 aaPredicted RBP9.4□□□□□ -0.9
SNIP1-204ENST00000638725 PSG4Q00888 419 aa9.4□□□□□ -0.9
SNIP1-204ENST00000638725 OR8B8Q15620 311 aa9.4□□□□□ -0.9
SNIP1-204ENST00000638725 ZNF506Q5JVG8 444 aa9.4□□□□□ -0.9
SNIP1-204ENST00000638725 SLC25A26Q70HW3 274 aa9.4□□□□□ -0.9
SNIP1-204ENST00000638725 CPNE4Q96A23 557 aaPredicted RBP9.4□□□□□ -0.9
SNIP1-204ENST00000638725 SIGLEC12Q96PQ1 595 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms