RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 ERP29P30040 261 aaKnown RBP14.3□□□□□ -0.12
PNKP-230ENST00000638016 PIGYQ3MUY2 71 aa14.3□□□□□ -0.12
PNKP-230ENST00000638016 FBLN7Q53RD9 439 aa14.3□□□□□ -0.12
PNKP-230ENST00000638016 RPL22L1Q6P5R6 122 aaKnown RBP14.3□□□□□ -0.12
PNKP-230ENST00000638016 DHRSXQ8N5I4 330 aa14.3□□□□□ -0.12
PNKP-230ENST00000638016 C11orf44Q8N8P7 122 aa14.3□□□□□ -0.12
PNKP-230ENST00000638016 GPR148Q8TDV2 347 aa14.3□□□□□ -0.12
PNKP-230ENST00000638016 TNFAIP8L1Q8WVP5 186 aa14.3□□□□□ -0.12
PNKP-230ENST00000638016 GGHQ92820 318 aa14.3□□□□□ -0.12
PNKP-230ENST00000638016 MYCBPQ99417 103 aaPredicted RBP14.3□□□□□ -0.12
PNKP-230ENST00000638016 TMEM133Q9H2Q1 129 aa14.3□□□□□ -0.12
PNKP-230ENST00000638016 GLS2Q9UI32 602 aa14.3□□□□□ -0.12
PNKP-230ENST00000638016 TBL2Q9Y4P3 447 aaKnown RBP14.3□□□□□ -0.12
PNKP-230ENST00000638016 PNMA8CA0A1B0GUJ8 204 aa14.29□□□□□ -0.12
PNKP-230ENST00000638016 H0YJX3 145 aa14.29□□□□□ -0.12
PNKP-230ENST00000638016 OGG1O15527 345 aa14.29□□□□□ -0.12
PNKP-230ENST00000638016 CDRT1O95170 752 aa14.29□□□□□ -0.12
PNKP-230ENST00000638016 CDK2P24941 298 aa14.29□□□□□ -0.12
PNKP-230ENST00000638016 EFNB2P52799 333 aa14.29□□□□□ -0.12
PNKP-230ENST00000638016 AANATQ16613 207 aa14.29□□□□□ -0.12
PNKP-230ENST00000638016 TTC23Q5W5X9 447 aa14.29□□□□□ -0.12
PNKP-230ENST00000638016 ZNF485Q8NCK3 441 aa14.29□□□□□ -0.12
PNKP-230ENST00000638016 TMEM106AQ96A25 262 aa14.29□□□□□ -0.12
PNKP-230ENST00000638016 GPER1Q99527 375 aa14.29□□□□□ -0.12
PNKP-230ENST00000638016 FBLN5Q9UBX5 448 aa14.29□□□□□ -0.12
PNKP-230ENST00000638016 TCF19Q9Y242 345 aa14.29□□□□□ -0.12
PNKP-230ENST00000638016 EXOSC1Q9Y3B2 195 aaKnown RBP14.29□□□□□ -0.12
PNKP-230ENST00000638016 TRAV24A0A0B4J272 114 aa14.28□□□□□ -0.12
PNKP-230ENST00000638016 ODAMA1E959 279 aa14.28□□□□□ -0.12
PNKP-230ENST00000638016 A6NDX4 124 aa14.28□□□□□ -0.12
PNKP-230ENST00000638016 VGLL3A8MV65 326 aa14.28□□□□□ -0.12
PNKP-230ENST00000638016 DEGS1O15121 323 aa14.28□□□□□ -0.12
PNKP-230ENST00000638016 MYL12AP19105 171 aa14.28□□□□□ -0.12
PNKP-230ENST00000638016 CCDC58Q4VC31 144 aa14.28□□□□□ -0.12
PNKP-230ENST00000638016 KRBOX4Q5JUW0 171 aa14.28□□□□□ -0.12
PNKP-230ENST00000638016 OGFRL1Q5TC84 451 aaPredicted RBP14.28□□□□□ -0.12
PNKP-230ENST00000638016 TET2Q6N021 2002 aaPredicted RBP14.28□□□□□ -0.12
PNKP-230ENST00000638016 TMPRSS11AQ6ZMR5 421 aa14.28□□□□□ -0.12
PNKP-230ENST00000638016 PACRGLQ8N7B6 248 aa14.28□□□□□ -0.12
PNKP-230ENST00000638016 OR4P4Q8NGL7 312 aa14.28□□□□□ -0.12
PNKP-230ENST00000638016 NDNFQ8TB73 568 aa14.28□□□□□ -0.12
PNKP-230ENST00000638016 SMIM19Q96E16 107 aa14.28□□□□□ -0.12
PNKP-230ENST00000638016 MALSU1Q96EH3 234 aa14.28□□□□□ -0.12
PNKP-230ENST00000638016 TMEM80Q96HE8 168 aa14.28□□□□□ -0.12
PNKP-230ENST00000638016 CLEC7AQ9BXN2 247 aa14.28□□□□□ -0.12
PNKP-230ENST00000638016 ZNF702PQ9H963 129 aa14.28□□□□□ -0.12
PNKP-230ENST00000638016 ZNF286AQ9HBT8 521 aa14.28□□□□□ -0.12
PNKP-230ENST00000638016 BABAM2Q9NXR7 383 aa14.28□□□□□ -0.12
PNKP-230ENST00000638016 UBE2J1Q9Y385 318 aaPredicted RBP14.28□□□□□ -0.12
PNKP-230ENST00000638016 TRGV10A0A0A0MS01 117 aa14.27□□□□□ -0.13
PNKP-230ENST00000638016 CD24P25063 80 aa14.27□□□□□ -0.13
PNKP-230ENST00000638016 CAPGP40121 348 aa14.27□□□□□ -0.13
PNKP-230ENST00000638016 MTNR1BP49286 362 aa14.27□□□□□ -0.13
PNKP-230ENST00000638016 RPS11P62280 158 aaKnown RBP eCLIP14.27□□□□□ -0.13
PNKP-230ENST00000638016 SLC34A1Q06495 639 aa14.27□□□□□ -0.13
PNKP-230ENST00000638016 ST3GAL4Q11206 333 aa14.27□□□□□ -0.13
PNKP-230ENST00000638016 C17orf58Q2M2W7 97 aa14.27□□□□□ -0.13
PNKP-230ENST00000638016 DDI2Q5TDH0 399 aa14.27□□□□□ -0.13
PNKP-230ENST00000638016 DMKNQ6E0U4 476 aaPredicted RBP14.27□□□□□ -0.13
PNKP-230ENST00000638016 Q6ZS46 218 aa14.27□□□□□ -0.13
PNKP-230ENST00000638016 SETD9Q8NE22 299 aa14.27□□□□□ -0.13
PNKP-230ENST00000638016 PXT1Q8NFP0 134 aa14.27□□□□□ -0.13
PNKP-230ENST00000638016 OR4C13Q8NGP0 309 aa14.27□□□□□ -0.13
PNKP-230ENST00000638016 PLPPR1Q8TBJ4 325 aa14.27□□□□□ -0.13
PNKP-230ENST00000638016 GHSRQ92847 366 aa14.27□□□□□ -0.13
PNKP-230ENST00000638016 FOXRED1Q96CU9 486 aaPredicted RBP14.27□□□□□ -0.13
PNKP-230ENST00000638016 PGLYRP3Q96LB9 341 aa14.27□□□□□ -0.13
PNKP-230ENST00000638016 ZNF281Q9Y2X9 895 aa14.27□□□□□ -0.13
PNKP-230ENST00000638016 PCDHGB5Q9Y5G0 923 aa14.27□□□□□ -0.13
PNKP-230ENST00000638016 NOTCH1P46531 2555 aa14.27□□□□□ -0.13
PNKP-230ENST00000638016 TRAV39A0A0B4J263 110 aa14.26□□□□□ -0.13
PNKP-230ENST00000638016 TRBV5-5A0A0J9YX44 114 aa14.26□□□□□ -0.13
PNKP-230ENST00000638016 A0A1W2PP11 408 aa14.26□□□□□ -0.13
PNKP-230ENST00000638016 A0A1W2PPK0 400 aa14.26□□□□□ -0.13
PNKP-230ENST00000638016 CASQ2O14958 399 aaPredicted RBP14.26□□□□□ -0.13
PNKP-230ENST00000638016 HTR3BO95264 441 aa14.26□□□□□ -0.13
PNKP-230ENST00000638016 CSN2P05814 226 aa14.26□□□□□ -0.13
PNKP-230ENST00000638016 CD2P06729 351 aa14.26□□□□□ -0.13
PNKP-230ENST00000638016 C21orf33P30042 268 aaPredicted RBP14.26□□□□□ -0.13
PNKP-230ENST00000638016 KIR2DS4P43632 304 aa14.26□□□□□ -0.13
PNKP-230ENST00000638016 PAN3Q58A45 887 aaKnown RBP14.26□□□□□ -0.13
PNKP-230ENST00000638016 ELP2Q6IA86 826 aa14.26□□□□□ -0.13
PNKP-230ENST00000638016 AHSA2Q719I0 299 aa14.26□□□□□ -0.13
PNKP-230ENST00000638016 ABHD12Q8N2K0 398 aa14.26□□□□□ -0.13
PNKP-230ENST00000638016 KLHDC1Q8N7A1 406 aa14.26□□□□□ -0.13
PNKP-230ENST00000638016 OR13A1Q8NGR1 328 aa14.26□□□□□ -0.13
PNKP-230ENST00000638016 OR52N1Q8NH53 320 aa14.26□□□□□ -0.13
PNKP-230ENST00000638016 HAVCR2Q8TDQ0 301 aa14.26□□□□□ -0.13
PNKP-230ENST00000638016 CORO2AQ92828 525 aa14.26□□□□□ -0.13
PNKP-230ENST00000638016 CYYR1Q96J86 154 aa14.26□□□□□ -0.13
PNKP-230ENST00000638016 RHOFQ9HBH0 211 aa14.26□□□□□ -0.13
PNKP-230ENST00000638016 ABCB10Q9NRK6 738 aa14.26□□□□□ -0.13
PNKP-230ENST00000638016 NKX1-2Q9UD57 310 aaPredicted RBP14.26□□□□□ -0.13
PNKP-230ENST00000638016 KIF25Q9UIL4 384 aa14.26□□□□□ -0.13
PNKP-230ENST00000638016 TRAV8-7A0A075B6U6 113 aa14.25□□□□□ -0.13
PNKP-230ENST00000638016 IRGMA1A4Y4 181 aa14.25□□□□□ -0.13
PNKP-230ENST00000638016 M0QZ24 198 aa14.25□□□□□ -0.13
PNKP-230ENST00000638016 TIMM23O14925 209 aa14.25□□□□□ -0.13
PNKP-230ENST00000638016 MAGEB3O15480 346 aa14.25□□□□□ -0.13
PNKP-230ENST00000638016 IGHV3-7P01780 117 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms