RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 Q6P435 159 aa18.34■□□□□ 0.53
CHRNA7-228ENST00000637519 RND1Q92730 232 aa18.34■□□□□ 0.53
CHRNA7-228ENST00000637519 DPCDQ9BVM2 203 aaPredicted RBP18.34■□□□□ 0.53
CHRNA7-228ENST00000637519 RANBP3Q9H6Z4 567 aaPredicted RBP18.34■□□□□ 0.53
CHRNA7-228ENST00000637519 JKAMPQ9P055 326 aa18.34■□□□□ 0.53
CHRNA7-228ENST00000637519 SLC23A1Q9UHI7 598 aa18.34■□□□□ 0.53
CHRNA7-228ENST00000637519 OR2A4O95047 310 aa18.34■□□□□ 0.53
CHRNA7-228ENST00000637519 NAPSAO96009 420 aa18.34■□□□□ 0.53
CHRNA7-228ENST00000637519 CD40P25942 277 aa18.34■□□□□ 0.53
CHRNA7-228ENST00000637519 FXYD4P59646 89 aa18.34■□□□□ 0.53
CHRNA7-228ENST00000637519 SNTB1Q13884 538 aaKnown RBP18.34■□□□□ 0.53
CHRNA7-228ENST00000637519 SLC9A3R2Q15599 337 aa18.34■□□□□ 0.53
CHRNA7-228ENST00000637519 GRK1Q15835 563 aa18.34■□□□□ 0.53
CHRNA7-228ENST00000637519 TMEM171Q8WVE6 324 aa18.34■□□□□ 0.53
CHRNA7-228ENST00000637519 TOMM40LQ969M1 308 aa18.34■□□□□ 0.53
CHRNA7-228ENST00000637519 OR2A7Q96R45 310 aa18.34■□□□□ 0.53
CHRNA7-228ENST00000637519 DMRTA2Q96SC8 542 aa18.34■□□□□ 0.53
CHRNA7-228ENST00000637519 OPN4Q9UHM6 478 aa18.34■□□□□ 0.53
CHRNA7-228ENST00000637519 DEGS1O15121 323 aa18.33■□□□□ 0.52
CHRNA7-228ENST00000637519 OR2H2O95918 312 aa18.33■□□□□ 0.52
CHRNA7-228ENST00000637519 KNG1P01042 644 aa18.33■□□□□ 0.52
CHRNA7-228ENST00000637519 TUBG1P23258 451 aa18.33■□□□□ 0.52
CHRNA7-228ENST00000637519 LY6DQ14210 128 aa18.33■□□□□ 0.52
CHRNA7-228ENST00000637519 KCTD9Q7L273 389 aa18.33■□□□□ 0.52
CHRNA7-228ENST00000637519 POM121Q96HA1 1249 aa18.33■□□□□ 0.52
CHRNA7-228ENST00000637519 TUBG2Q9NRH3 451 aa18.33■□□□□ 0.52
CHRNA7-228ENST00000637519 OR14J1Q9UGF5 321 aa18.33■□□□□ 0.52
CHRNA7-228ENST00000637519 THBDP07204 575 aa18.32■□□□□ 0.52
CHRNA7-228ENST00000637519 NFYAP23511 347 aaPredicted RBP18.32■□□□□ 0.52
CHRNA7-228ENST00000637519 PMELP40967 661 aa18.32■□□□□ 0.52
CHRNA7-228ENST00000637519 SUPT4H1P63272 117 aaKnown RBP18.32■□□□□ 0.52
CHRNA7-228ENST00000637519 LINC00596Q86U02 117 aa18.32■□□□□ 0.52
CHRNA7-228ENST00000637519 TRAF4Q9BUZ4 470 aaPredicted RBP18.32■□□□□ 0.52
CHRNA7-228ENST00000637519 FXYD6Q9H0Q3 95 aa18.32■□□□□ 0.52
CHRNA7-228ENST00000637519 Q9N2K0 584 aa18.32■□□□□ 0.52
CHRNA7-228ENST00000637519 NBEAQ8NFP9 2946 aa18.32■□□□□ 0.52
CHRNA7-228ENST00000637519 TRAV39A0A0B4J263 110 aa18.32■□□□□ 0.52
CHRNA7-228ENST00000637519 hCG_1807616A0A1W2PRN6 198 aa18.32■□□□□ 0.52
CHRNA7-228ENST00000637519 SCTP09683 121 aa18.32■□□□□ 0.52
CHRNA7-228ENST00000637519 ZNF250P15622 560 aa18.32■□□□□ 0.52
CHRNA7-228ENST00000637519 FCGR2CP31995 323 aa18.32■□□□□ 0.52
CHRNA7-228ENST00000637519 GLRXP35754 106 aa18.32■□□□□ 0.52
CHRNA7-228ENST00000637519 WDR82Q6UXN9 313 aa18.32■□□□□ 0.52
CHRNA7-228ENST00000637519 MRPL30Q8TCC3 161 aaKnown RBP18.32■□□□□ 0.52
CHRNA7-228ENST00000637519 MITD1Q8WV92 249 aa18.32■□□□□ 0.52
CHRNA7-228ENST00000637519 VKORC1Q9BQB6 163 aa18.32■□□□□ 0.52
CHRNA7-228ENST00000637519 ELOVL5Q9NYP7 299 aa18.32■□□□□ 0.52
CHRNA7-228ENST00000637519 MEMO1Q9Y316 297 aa18.32■□□□□ 0.52
CHRNA7-228ENST00000637519 C3orf36Q3SXR2 165 aa18.31■□□□□ 0.52
CHRNA7-228ENST00000637519 TMEM128Q5BJH2 165 aa18.31■□□□□ 0.52
CHRNA7-228ENST00000637519 CLEC18BQ6UXF7 455 aa18.31■□□□□ 0.52
CHRNA7-228ENST00000637519 POC1AQ8NBT0 407 aa18.31■□□□□ 0.52
CHRNA7-228ENST00000637519 MRPL37Q9BZE1 423 aaKnown RBP18.31■□□□□ 0.52
CHRNA7-228ENST00000637519 SPEF1Q9Y4P9 236 aa18.31■□□□□ 0.52
CHRNA7-228ENST00000637519 PRSS44E7EML9 344 aa18.3■□□□□ 0.52
CHRNA7-228ENST00000637519 SLC33A1O00400 549 aaPredicted RBP18.3■□□□□ 0.52
CHRNA7-228ENST00000637519 NOS1APO75052 506 aaPredicted RBP18.3■□□□□ 0.52
CHRNA7-228ENST00000637519 RCC1P18754 421 aaPredicted RBP18.3■□□□□ 0.52
CHRNA7-228ENST00000637519 KLF3P57682 345 aaPredicted RBP18.3■□□□□ 0.52
CHRNA7-228ENST00000637519 TAS2R31P59538 309 aa18.3■□□□□ 0.52
CHRNA7-228ENST00000637519 RAP2BP61225 183 aa18.3■□□□□ 0.52
CHRNA7-228ENST00000637519 HERPUD1Q15011 391 aa18.3■□□□□ 0.52
CHRNA7-228ENST00000637519 PAN3Q58A45 887 aaKnown RBP18.3■□□□□ 0.52
CHRNA7-228ENST00000637519 FAHD2BQ6P2I3 314 aaPredicted RBP18.3■□□□□ 0.52
CHRNA7-228ENST00000637519 Q8IYB0 196 aa18.3■□□□□ 0.52
CHRNA7-228ENST00000637519 TMEM185AQ8NFB2 350 aa18.3■□□□□ 0.52
CHRNA7-228ENST00000637519 FAHD2AQ96GK7 314 aa18.3■□□□□ 0.52
CHRNA7-228ENST00000637519 SPACA1Q9HBV2 294 aa18.3■□□□□ 0.52
CHRNA7-228ENST00000637519 BET1O15155 118 aa18.3■□□□□ 0.52
CHRNA7-228ENST00000637519 TSC22D2O75157 780 aa18.3■□□□□ 0.52
CHRNA7-228ENST00000637519 PPP3CBP16298 524 aa18.3■□□□□ 0.52
CHRNA7-228ENST00000637519 SSTR2P30874 369 aa18.3■□□□□ 0.52
CHRNA7-228ENST00000637519 ATXN7L3Q14CW9 347 aaPredicted RBP18.3■□□□□ 0.52
CHRNA7-228ENST00000637519 PLPPR1Q8TBJ4 325 aa18.3■□□□□ 0.52
CHRNA7-228ENST00000637519 PHB2Q99623 299 aa18.3■□□□□ 0.52
CHRNA7-228ENST00000637519 PAIP2BQ9ULR5 123 aaKnown RBP18.3■□□□□ 0.52
CHRNA7-228ENST00000637519 SPRY3O43610 288 aa18.29■□□□□ 0.52
CHRNA7-228ENST00000637519 DUS4LO95620 317 aaKnown RBP18.29■□□□□ 0.52
CHRNA7-228ENST00000637519 IGHV3-13P01766 116 aa18.29■□□□□ 0.52
CHRNA7-228ENST00000637519 RPS2P15880 293 aaKnown RBP18.29■□□□□ 0.52
CHRNA7-228ENST00000637519 DHODHQ02127 395 aa18.29■□□□□ 0.52
CHRNA7-228ENST00000637519 DHRS11Q6UWP2 260 aa18.29■□□□□ 0.52
CHRNA7-228ENST00000637519 C1orf174Q8IYL3 243 aa18.29■□□□□ 0.52
CHRNA7-228ENST00000637519 OR5M8Q8NGP6 311 aa18.29■□□□□ 0.52
CHRNA7-228ENST00000637519 SEC22AQ96IW7 307 aa18.29■□□□□ 0.52
CHRNA7-228ENST00000637519 TLNRD1Q9H1K6 362 aa18.29■□□□□ 0.52
CHRNA7-228ENST00000637519 C1orf123Q9NWV4 160 aa18.29■□□□□ 0.52
CHRNA7-228ENST00000637519 ITPR1Q14643 2758 aa18.29■□□□□ 0.52
CHRNA7-228ENST00000637519 SHANK1Q9Y566 2161 aa18.29■□□□□ 0.52
CHRNA7-228ENST00000637519 DPRXA6NFQ7 191 aa18.29■□□□□ 0.52
CHRNA7-228ENST00000637519 FAM25EA8MYX2 175 aa18.29■□□□□ 0.52
CHRNA7-228ENST00000637519 ABCD4O14678 606 aa18.29■□□□□ 0.52
CHRNA7-228ENST00000637519 AADACP22760 399 aa18.29■□□□□ 0.52
CHRNA7-228ENST00000637519 OR5T2Q8NGG2 359 aa18.29■□□□□ 0.52
CHRNA7-228ENST00000637519 ELMOD3Q96FG2 381 aa18.29■□□□□ 0.52
CHRNA7-228ENST00000637519 HES4Q9HCC6 221 aa18.29■□□□□ 0.52
CHRNA7-228ENST00000637519 C14orf166Q9Y224 244 aaKnown RBP18.29■□□□□ 0.52
CHRNA7-228ENST00000637519 IGKV1-6A0A0C4DH72 117 aa18.28■□□□□ 0.52
CHRNA7-228ENST00000637519 A0A1B0GWJ7 208 aa18.28■□□□□ 0.52
CHRNA7-228ENST00000637519 SFT2D2O95562 160 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms