RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 SNRPD2P62316 118 aaKnown RBP17.7■□□□□ 0.42
CLN8-213ENST00000637156 SMIM21Q3B7S5 101 aa17.7■□□□□ 0.42
CLN8-213ENST00000637156 DEDD2Q8WXF8 326 aa17.7■□□□□ 0.42
CLN8-213ENST00000637156 MAFIPQ8WZ33 124 aa17.7■□□□□ 0.42
CLN8-213ENST00000637156 PLEKHA6Q9Y2H5 1048 aa17.7■□□□□ 0.42
CLN8-213ENST00000637156 HPXP02790 462 aa17.69■□□□□ 0.42
CLN8-213ENST00000637156 AKAIN1P0CW23 69 aa17.69■□□□□ 0.42
CLN8-213ENST00000637156 PSG2P11465 335 aa17.69■□□□□ 0.42
CLN8-213ENST00000637156 CCR6P51684 374 aa17.69■□□□□ 0.42
CLN8-213ENST00000637156 FIP1L1Q6UN15 594 aaKnown RBP17.69■□□□□ 0.42
CLN8-213ENST00000637156 ENKURQ8TC29 256 aa17.69■□□□□ 0.42
CLN8-213ENST00000637156 TINAGL1Q9GZM7 467 aaPredicted RBP17.69■□□□□ 0.42
CLN8-213ENST00000637156 CBLN4Q9NTU7 201 aa17.69■□□□□ 0.42
CLN8-213ENST00000637156 NPTNQ9Y639 398 aa17.69■□□□□ 0.42
CLN8-213ENST00000637156 IGKV1D-8A0A087WSZ0 117 aa17.69■□□□□ 0.42
CLN8-213ENST00000637156 M0QYG6 137 aa17.69■□□□□ 0.42
CLN8-213ENST00000637156 PSPNO60542 156 aa17.69■□□□□ 0.42
CLN8-213ENST00000637156 ZNF205O95201 554 aa17.69■□□□□ 0.42
CLN8-213ENST00000637156 GLAP06280 429 aa17.69■□□□□ 0.42
CLN8-213ENST00000637156 CD177Q8N6Q3 437 aa17.69■□□□□ 0.42
CLN8-213ENST00000637156 VRK1Q99986 396 aaPredicted RBP17.69■□□□□ 0.42
CLN8-213ENST00000637156 CACNG6Q9BXT2 260 aa17.69■□□□□ 0.42
CLN8-213ENST00000637156 MCUBQ9NWR8 336 aa17.69■□□□□ 0.42
CLN8-213ENST00000637156 IGHV3OR15-7A0A075B7D8 119 aa17.68■□□□□ 0.42
CLN8-213ENST00000637156 NAP1L6A6NFF2 107 aa17.68■□□□□ 0.42
CLN8-213ENST00000637156 OR2AT4A6NND4 320 aa17.68■□□□□ 0.42
CLN8-213ENST00000637156 RAB3DO95716 219 aa17.68■□□□□ 0.42
CLN8-213ENST00000637156 PRDX2P32119 198 aa17.68■□□□□ 0.42
CLN8-213ENST00000637156 MRPS15P82914 257 aaKnown RBP17.68■□□□□ 0.42
CLN8-213ENST00000637156 AGAP6Q5VW22 663 aa17.68■□□□□ 0.42
CLN8-213ENST00000637156 C11orf71Q6IPW1 123 aa17.68■□□□□ 0.42
CLN8-213ENST00000637156 FAM90A1Q86YD7 464 aa17.68■□□□□ 0.42
CLN8-213ENST00000637156 BEST4Q8NFU0 473 aa17.68■□□□□ 0.42
CLN8-213ENST00000637156 OR56B4Q8NH76 319 aa17.68■□□□□ 0.42
CLN8-213ENST00000637156 ZNF701Q9NV72 531 aaPredicted RBP17.68■□□□□ 0.42
CLN8-213ENST00000637156 GLS2Q9UI32 602 aa17.68■□□□□ 0.42
CLN8-213ENST00000637156 METRNQ9UJH8 293 aa17.68■□□□□ 0.42
CLN8-213ENST00000637156 WIPI2Q9Y4P8 454 aa17.68■□□□□ 0.42
CLN8-213ENST00000637156 IGKV1D-17A0A075B6S4 117 aa17.67■□□□□ 0.42
CLN8-213ENST00000637156 NAPSAO96009 420 aa17.67■□□□□ 0.42
CLN8-213ENST00000637156 FCGR3AP08637 254 aa17.67■□□□□ 0.42
CLN8-213ENST00000637156 HRH1P35367 487 aa17.67■□□□□ 0.42
CLN8-213ENST00000637156 C20orf204Q6ZNR8 217 aa17.67■□□□□ 0.42
CLN8-213ENST00000637156 OR11L1Q8NGX0 322 aa17.67■□□□□ 0.42
CLN8-213ENST00000637156 OR4K15Q8NH41 348 aa17.67■□□□□ 0.42
CLN8-213ENST00000637156 CCL17Q92583 94 aa17.67■□□□□ 0.42
CLN8-213ENST00000637156 SPOCK3Q9BQ16 436 aa17.67■□□□□ 0.42
CLN8-213ENST00000637156 DNAJB11Q9UBS4 358 aa17.67■□□□□ 0.42
CLN8-213ENST00000637156 LRRK2Q5S007 2527 aa17.67■□□□□ 0.42
CLN8-213ENST00000637156 IFNL4K9M1U5 179 aa17.67■□□□□ 0.42
CLN8-213ENST00000637156 ZNF735P0CB33 412 aa17.67■□□□□ 0.42
CLN8-213ENST00000637156 DTYMKP23919 212 aa17.67■□□□□ 0.42
CLN8-213ENST00000637156 RBM39Q14498 530 aaKnown RBP17.67■□□□□ 0.42
CLN8-213ENST00000637156 MICBQ29980 383 aa17.67■□□□□ 0.42
CLN8-213ENST00000637156 PAN3Q58A45 887 aaKnown RBP17.67■□□□□ 0.42
CLN8-213ENST00000637156 CADM3Q8N126 398 aa17.67■□□□□ 0.42
CLN8-213ENST00000637156 NEK7Q8TDX7 302 aa17.67■□□□□ 0.42
CLN8-213ENST00000637156 C12orf4Q9NQ89 552 aa17.67■□□□□ 0.42
CLN8-213ENST00000637156 PMP2P02689 132 aa17.66■□□□□ 0.42
CLN8-213ENST00000637156 FAUP35544 74 aaKnown RBP17.66■□□□□ 0.42
CLN8-213ENST00000637156 PPOXP50336 477 aa17.66■□□□□ 0.42
CLN8-213ENST00000637156 DTX2Q86UW9 622 aa17.66■□□□□ 0.42
CLN8-213ENST00000637156 OR51S1Q8NGJ8 323 aa17.66■□□□□ 0.42
CLN8-213ENST00000637156 TMEM165Q9HC07 324 aa17.66■□□□□ 0.42
CLN8-213ENST00000637156 LAMP3Q9UQV4 416 aa17.66■□□□□ 0.42
CLN8-213ENST00000637156 TCRBP04435 133 aa17.65■□□□□ 0.42
CLN8-213ENST00000637156 IRF2P14316 349 aa17.65■□□□□ 0.42
CLN8-213ENST00000637156 AMY2BP19961 511 aa17.65■□□□□ 0.42
CLN8-213ENST00000637156 CD80P33681 288 aa17.65■□□□□ 0.42
CLN8-213ENST00000637156 COL10A1Q03692 680 aa17.65■□□□□ 0.42
CLN8-213ENST00000637156 PLET1Q6UQ28 207 aa17.65■□□□□ 0.42
CLN8-213ENST00000637156 C17orf107Q6ZR85 190 aa17.65■□□□□ 0.42
CLN8-213ENST00000637156 ANGPTL6Q8NI99 470 aa17.65■□□□□ 0.42
CLN8-213ENST00000637156 UPRTQ96BW1 309 aa17.65■□□□□ 0.42
CLN8-213ENST00000637156 SLC6A7Q99884 636 aa17.65■□□□□ 0.42
CLN8-213ENST00000637156 CHST6Q9GZX3 395 aa17.65■□□□□ 0.42
CLN8-213ENST00000637156 SHARPINQ9H0F6 387 aa17.65■□□□□ 0.42
CLN8-213ENST00000637156 DPAGT1Q9H3H5 408 aa17.65■□□□□ 0.42
CLN8-213ENST00000637156 SEBOXQ9HB31 216 aaPredicted RBP17.65■□□□□ 0.42
CLN8-213ENST00000637156 EDARQ9UNE0 448 aa17.65■□□□□ 0.42
CLN8-213ENST00000637156 DYSFO75923 2080 aa17.65■□□□□ 0.42
CLN8-213ENST00000637156 TMEM82A0PJX8 343 aa17.65■□□□□ 0.42
CLN8-213ENST00000637156 LRRC30A6NM36 301 aa17.65■□□□□ 0.42
CLN8-213ENST00000637156 TMEM178BH3BS89 294 aa17.65■□□□□ 0.42
CLN8-213ENST00000637156 CLDN1O95832 211 aa17.65■□□□□ 0.42
CLN8-213ENST00000637156 ZNF782Q6ZMW2 699 aaPredicted RBP17.65■□□□□ 0.42
CLN8-213ENST00000637156 DEFB108BQ8NET1 73 aa17.65■□□□□ 0.42
CLN8-213ENST00000637156 PLPPR1Q8TBJ4 325 aa17.65■□□□□ 0.42
CLN8-213ENST00000637156 HPS1Q92902 700 aa17.65■□□□□ 0.42
CLN8-213ENST00000637156 MARVELD1Q9BSK0 173 aa17.65■□□□□ 0.42
CLN8-213ENST00000637156 PPA2Q9H2U2 334 aa17.65■□□□□ 0.42
CLN8-213ENST00000637156 TMEM106BQ9NUM4 274 aa17.65■□□□□ 0.42
CLN8-213ENST00000637156 ING3Q9NXR8 418 aa17.65■□□□□ 0.42
CLN8-213ENST00000637156 ANXA10Q9UJ72 324 aa17.65■□□□□ 0.42
CLN8-213ENST00000637156 ZNF222Q9UK12 451 aa17.65■□□□□ 0.42
CLN8-213ENST00000637156 BOLA2-SMG1P6H3BVE0 249 aa17.64■□□□□ 0.41
CLN8-213ENST00000637156 CSN2P05814 226 aa17.64■□□□□ 0.41
CLN8-213ENST00000637156 COL8A2P25067 703 aa17.64■□□□□ 0.41
CLN8-213ENST00000637156 RNASE10Q5GAN6 216 aaKnown RBP17.64■□□□□ 0.41
CLN8-213ENST00000637156 SHEQ5VZ18 495 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms