RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 NAPSAO96009 420 aa10.4□□□□□ -0.74
CLN8-212ENST00000637083 NGFP01138 241 aa10.4□□□□□ -0.74
CLN8-212ENST00000637083 S100GP29377 79 aa10.4□□□□□ -0.74
CLN8-212ENST00000637083 RND3P61587 244 aa10.4□□□□□ -0.74
CLN8-212ENST00000637083 PDCD1Q15116 288 aa10.4□□□□□ -0.74
CLN8-212ENST00000637083 PHLDA2Q53GA4 152 aa10.4□□□□□ -0.74
CLN8-212ENST00000637083 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.4□□□□□ -0.74
CLN8-212ENST00000637083 SPIN2AQ99865 258 aa10.4□□□□□ -0.74
CLN8-212ENST00000637083 SPIN2BQ9BPZ2 258 aa10.4□□□□□ -0.74
CLN8-212ENST00000637083 MMP26Q9NRE1 261 aa10.4□□□□□ -0.74
CLN8-212ENST00000637083 MTCH1Q9NZJ7 389 aa10.4□□□□□ -0.74
CLN8-212ENST00000637083 MYO7BQ6PIF6 2116 aa10.4□□□□□ -0.74
CLN8-212ENST00000637083 C3orf85A0A1B0GTC6 90 aa10.4□□□□□ -0.75
CLN8-212ENST00000637083 ZNF705EA8MWA4 302 aaPredicted RBP10.4□□□□□ -0.75
CLN8-212ENST00000637083 TRDCB7Z8K6 153 aa10.4□□□□□ -0.75
CLN8-212ENST00000637083 MPPED1O15442 326 aa10.4□□□□□ -0.75
CLN8-212ENST00000637083 PHF1O43189 567 aaPredicted RBP10.4□□□□□ -0.75
CLN8-212ENST00000637083 SCGB1D2O95969 90 aa10.4□□□□□ -0.75
CLN8-212ENST00000637083 IL18BPO95998 194 aa10.4□□□□□ -0.75
CLN8-212ENST00000637083 PRKACAP17612 351 aa10.4□□□□□ -0.75
CLN8-212ENST00000637083 UBE2NP61088 152 aaKnown RBP10.4□□□□□ -0.75
CLN8-212ENST00000637083 TGIF1Q15583 401 aa10.4□□□□□ -0.75
CLN8-212ENST00000637083 HAGHLQ6PII5 290 aaPredicted RBP10.4□□□□□ -0.75
CLN8-212ENST00000637083 FBXW12Q6X9E4 464 aa10.4□□□□□ -0.75
CLN8-212ENST00000637083 MSI2Q96DH6 328 aaKnown RBP10.4□□□□□ -0.75
CLN8-212ENST00000637083 NARS2Q96I59 477 aaKnown RBP10.4□□□□□ -0.75
CLN8-212ENST00000637083 MICU1Q9BPX6 476 aa10.4□□□□□ -0.75
CLN8-212ENST00000637083 ZNF552Q9H707 407 aaPredicted RBP10.4□□□□□ -0.75
CLN8-212ENST00000637083 LPAR3Q9UBY5 353 aa10.4□□□□□ -0.75
CLN8-212ENST00000637083 ATP23Q9Y6H3 246 aa10.4□□□□□ -0.75
CLN8-212ENST00000637083 EP300Q09472 2414 aaPredicted RBP10.39□□□□□ -0.75
CLN8-212ENST00000637083 MED13Q9UHV7 2174 aa10.39□□□□□ -0.75
CLN8-212ENST00000637083 TRBV6-6A0A0A6YYG2 114 aa10.39□□□□□ -0.75
CLN8-212ENST00000637083 BORCS7-ASMTA0A0B4J1R7 106 aa10.39□□□□□ -0.75
CLN8-212ENST00000637083 DUXBA0A1W2PPF3 345 aa10.39□□□□□ -0.75
CLN8-212ENST00000637083 GPR31O00270 319 aa10.39□□□□□ -0.75
CLN8-212ENST00000637083 ST8SIA3O43173 380 aa10.39□□□□□ -0.75
CLN8-212ENST00000637083 CDS2O95674 445 aa10.39□□□□□ -0.75
CLN8-212ENST00000637083 HOXB1P14653 301 aaPredicted RBP10.39□□□□□ -0.75
CLN8-212ENST00000637083 P2RY1P47900 373 aa10.39□□□□□ -0.75
CLN8-212ENST00000637083 TNFSF10P50591 281 aa10.39□□□□□ -0.75
CLN8-212ENST00000637083 BTN1A1Q13410 526 aa10.39□□□□□ -0.75
CLN8-212ENST00000637083 GNMTQ14749 295 aa10.39□□□□□ -0.75
CLN8-212ENST00000637083 SP6Q3SY56 376 aa10.39□□□□□ -0.75
CLN8-212ENST00000637083 HIKESHIQ53FT3 197 aa10.39□□□□□ -0.75
CLN8-212ENST00000637083 MDP1Q86V88 176 aa10.39□□□□□ -0.75
CLN8-212ENST00000637083 Q8IYB0 196 aa10.39□□□□□ -0.75
CLN8-212ENST00000637083 SUMF1Q8NBK3 374 aa10.39□□□□□ -0.75
CLN8-212ENST00000637083 BHLHE23Q8NDY6 225 aa10.39□□□□□ -0.75
CLN8-212ENST00000637083 BPIFCQ8NFQ6 507 aa10.39□□□□□ -0.75
CLN8-212ENST00000637083 GLYATL2Q8WU03 294 aa10.39□□□□□ -0.75
CLN8-212ENST00000637083 RTL8AQ9BWD3 113 aa10.39□□□□□ -0.75
CLN8-212ENST00000637083 SPRR3Q9UBC9 169 aa10.39□□□□□ -0.75
CLN8-212ENST00000637083 GPR137BO60478 399 aa10.38□□□□□ -0.75
CLN8-212ENST00000637083 FAM157CP0CG43 387 aa10.38□□□□□ -0.75
CLN8-212ENST00000637083 SELEP16581 610 aa10.38□□□□□ -0.75
CLN8-212ENST00000637083 IL32P24001 234 aa10.38□□□□□ -0.75
CLN8-212ENST00000637083 MDH2P40926 338 aaKnown RBP10.38□□□□□ -0.75
CLN8-212ENST00000637083 WNT5AP41221 380 aa10.38□□□□□ -0.75
CLN8-212ENST00000637083 ATP1A1-AS1Q5TC04 95 aa10.38□□□□□ -0.75
CLN8-212ENST00000637083 LYZL2Q7Z4W2 148 aa10.38□□□□□ -0.75
CLN8-212ENST00000637083 PIP4P1Q86T03 277 aa10.38□□□□□ -0.75
CLN8-212ENST00000637083 CMTM1Q8IZ96 169 aa10.38□□□□□ -0.75
CLN8-212ENST00000637083 FAM58AQ8N1B3 248 aa10.38□□□□□ -0.75
CLN8-212ENST00000637083 SMIM8Q96KF7 97 aa10.38□□□□□ -0.75
CLN8-212ENST00000637083 FGF23Q9GZV9 251 aaPredicted RBP10.38□□□□□ -0.75
CLN8-212ENST00000637083 IFT22Q9H7X7 185 aa10.38□□□□□ -0.75
CLN8-212ENST00000637083 CDH20Q9HBT6 801 aa10.38□□□□□ -0.75
CLN8-212ENST00000637083 UBE2J1Q9Y385 318 aaPredicted RBP10.38□□□□□ -0.75
CLN8-212ENST00000637083 TNRC6AQ8NDV7 1962 aaKnown RBP10.38□□□□□ -0.75
CLN8-212ENST00000637083 TMEM218A2RU14 115 aa10.38□□□□□ -0.75
CLN8-212ENST00000637083 CDRT15L2A8MXV6 281 aa10.38□□□□□ -0.75
CLN8-212ENST00000637083 J3QT63 122 aa10.38□□□□□ -0.75
CLN8-212ENST00000637083 GALR2O43603 387 aaPredicted RBP10.38□□□□□ -0.75
CLN8-212ENST00000637083 CNOT4O95628 575 aaKnown RBP10.38□□□□□ -0.75
CLN8-212ENST00000637083 IGHG3P01860 377 aa10.38□□□□□ -0.75
CLN8-212ENST00000637083 MBPP02686 304 aaPredicted RBP10.38□□□□□ -0.75
CLN8-212ENST00000637083 PVALBP20472 110 aaPredicted RBP10.38□□□□□ -0.75
CLN8-212ENST00000637083 SULT1A2P50226 295 aa10.38□□□□□ -0.75
CLN8-212ENST00000637083 TMEM33P57088 247 aa10.38□□□□□ -0.75
CLN8-212ENST00000637083 DEFA5Q01523 94 aa10.38□□□□□ -0.75
CLN8-212ENST00000637083 PJVKQ0ZLH3 352 aa10.38□□□□□ -0.75
CLN8-212ENST00000637083 IGSF11Q5DX21 431 aa10.38□□□□□ -0.75
CLN8-212ENST00000637083 SPIN3Q5JUX0 258 aa10.38□□□□□ -0.75
CLN8-212ENST00000637083 RPL7L1Q6DKI1 246 aaKnown RBP10.38□□□□□ -0.75
CLN8-212ENST00000637083 ZNF695Q8IW36 515 aa10.38□□□□□ -0.75
CLN8-212ENST00000637083 UBAC2Q8NBM4 344 aa10.38□□□□□ -0.75
CLN8-212ENST00000637083 ABHD14BQ96IU4 210 aa10.38□□□□□ -0.75
CLN8-212ENST00000637083 TMEM222Q9H0R3 208 aa10.38□□□□□ -0.75
CLN8-212ENST00000637083 FBXL17Q9UF56 701 aa10.38□□□□□ -0.75
CLN8-212ENST00000637083 POLDIP2Q9Y2S7 368 aa10.38□□□□□ -0.75
CLN8-212ENST00000637083 LRP5LA4QPB2 252 aa10.37□□□□□ -0.75
CLN8-212ENST00000637083 SYNGR1O43759 233 aa10.37□□□□□ -0.75
CLN8-212ENST00000637083 DAZAP2Q15038 168 aaPredicted RBP10.37□□□□□ -0.75
CLN8-212ENST00000637083 SWI5Q1ZZU3 235 aa10.37□□□□□ -0.75
CLN8-212ENST00000637083 INO80CQ6PI98 192 aaPredicted RBP10.37□□□□□ -0.75
CLN8-212ENST00000637083 LDLRAD3Q86YD5 345 aa10.37□□□□□ -0.75
CLN8-212ENST00000637083 SVBPQ8N300 66 aa10.37□□□□□ -0.75
CLN8-212ENST00000637083 SUMF2Q8NBJ7 301 aa10.37□□□□□ -0.75
CLN8-212ENST00000637083 OR4A4PQ8NGN8 299 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms