RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 PIGLQ9Y2B2 252 aa9.98□□□□□ -0.81
CLN6-217ENST00000636964 ROS1P08922 2347 aa9.98□□□□□ -0.81
CLN6-217ENST00000636964 CD74P04233 296 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 CCL2P13500 99 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 RCC1P18754 421 aaPredicted RBP9.97□□□□□ -0.81
CLN6-217ENST00000636964 SPINK2P20155 84 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 CCNOP22674 350 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 OR3A4PP47883 348 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 MRPS10P82664 201 aaKnown RBP9.97□□□□□ -0.81
CLN6-217ENST00000636964 LHFPL4Q7Z7J7 247 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 RTN4RL2Q86UN3 420 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 ZNF101Q8IZC7 436 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 CCDC107Q8WV48 283 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 TMEM45BQ96B21 275 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 WDYHV1Q96HA8 205 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 CNTNAP3BQ96NU0 1288 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 OR2H1Q9GZK4 316 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 METTL1Q9UBP6 276 aaKnown RBP9.97□□□□□ -0.81
CLN6-217ENST00000636964 UPB1Q9UBR1 384 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 IL19Q9UHD0 177 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 TIMM10BQ9Y5J6 103 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 PUS1Q9Y606 427 aaKnown RBP eCLIP9.97□□□□□ -0.81
CLN6-217ENST00000636964 ZNF705EA8MWA4 302 aaPredicted RBP9.97□□□□□ -0.81
CLN6-217ENST00000636964 FAM157AC9JC47 383 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 HLA-HP01893 362 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 SNRPCP09234 159 aaKnown RBP9.97□□□□□ -0.81
CLN6-217ENST00000636964 VSIG8P0DPA2 414 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 CD37P11049 281 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 GTF2F2P13984 249 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 CRYGSP22914 178 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 UNC119Q13432 240 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 ACOT7LQ6ZUV0 252 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 ZNF100Q8IYN0 542 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 CYYR1Q96J86 154 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 SELENOIQ9C0D9 397 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 CYTL1Q9NRR1 136 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 PARPBPQ9NWS1 579 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 A0A1W2PP11 408 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 IFITM10A6NMD0 228 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 F5H0A9 414 aaPredicted RBP9.97□□□□□ -0.81
CLN6-217ENST00000636964 TCF21O43680 179 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 CCL1P22362 96 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 PRSS3P35030 304 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 PKIAP61925 76 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 CXADRP78310 365 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 SLC9A3R2Q15599 337 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 ZNF529Q6P280 563 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 GLIPR1L1Q6UWM5 242 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 TMED4Q7Z7H5 227 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 APH1AQ96BI3 265 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 BANF2Q9H503 90 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 PRSS50Q9UI38 385 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 ACACAQ13085 2346 aa9.97□□□□□ -0.81
CLN6-217ENST00000636964 TNRC6AQ8NDV7 1962 aaKnown RBP9.96□□□□□ -0.81
CLN6-217ENST00000636964 OR14I1A6ND48 311 aa9.96□□□□□ -0.81
CLN6-217ENST00000636964 NQO2P16083 231 aa9.96□□□□□ -0.81
CLN6-217ENST00000636964 AGTR1P30556 359 aa9.96□□□□□ -0.81
CLN6-217ENST00000636964 DHRS2Q13268 280 aa9.96□□□□□ -0.81
CLN6-217ENST00000636964 UBE2V2Q15819 145 aa9.96□□□□□ -0.81
CLN6-217ENST00000636964 ACTBL2Q562R1 376 aa9.96□□□□□ -0.81
CLN6-217ENST00000636964 CHST4Q8NCG5 386 aa9.96□□□□□ -0.81
CLN6-217ENST00000636964 OR10R2Q8NGX6 335 aa9.96□□□□□ -0.81
CLN6-217ENST00000636964 TMED6Q8WW62 240 aa9.96□□□□□ -0.81
CLN6-217ENST00000636964 PIGTQ969N2 578 aa9.96□□□□□ -0.81
CLN6-217ENST00000636964 PIK3IP1Q96FE7 263 aa9.96□□□□□ -0.81
CLN6-217ENST00000636964 OR10A2Q9H208 303 aa9.96□□□□□ -0.81
CLN6-217ENST00000636964 ZDHHC11Q9H8X9 412 aa9.96□□□□□ -0.81
CLN6-217ENST00000636964 POLEQ07864 2286 aa9.96□□□□□ -0.81
CLN6-217ENST00000636964 TMEM235A6NFC5 223 aa9.96□□□□□ -0.82
CLN6-217ENST00000636964 M0QYG6 137 aa9.96□□□□□ -0.82
CLN6-217ENST00000636964 DHRS3O75911 302 aa9.96□□□□□ -0.82
CLN6-217ENST00000636964 DTYMKP23919 212 aa9.96□□□□□ -0.82
CLN6-217ENST00000636964 ACKR3P25106 362 aa9.96□□□□□ -0.82
CLN6-217ENST00000636964 SLAQ13239 276 aa9.96□□□□□ -0.82
CLN6-217ENST00000636964 RNASE10Q5GAN6 216 aaKnown RBP9.96□□□□□ -0.82
CLN6-217ENST00000636964 OR52W1Q6IF63 320 aa9.96□□□□□ -0.82
CLN6-217ENST00000636964 TMEM104Q8NE00 496 aa9.96□□□□□ -0.82
CLN6-217ENST00000636964 MRGPRFQ96AM1 343 aa9.96□□□□□ -0.82
CLN6-217ENST00000636964 RRNAD1Q96FB5 475 aaKnown RBP9.96□□□□□ -0.82
CLN6-217ENST00000636964 NICN1Q9BSH3 213 aa9.96□□□□□ -0.82
CLN6-217ENST00000636964 MRPS28Q9Y2Q9 187 aaKnown RBP9.96□□□□□ -0.82
CLN6-217ENST00000636964 TEX13DA0A0J9YY54 714 aaPredicted RBP9.95□□□□□ -0.82
CLN6-217ENST00000636964 ZNF503-AS2A6NEH8 195 aa9.95□□□□□ -0.82
CLN6-217ENST00000636964 WIPF3A6NGB9 483 aa9.95□□□□□ -0.82
CLN6-217ENST00000636964 ZNF587BE7ETH6 402 aa9.95□□□□□ -0.82
CLN6-217ENST00000636964 F8VVB4 439 aa9.95□□□□□ -0.82
CLN6-217ENST00000636964 F8VWA3 439 aa9.95□□□□□ -0.82
CLN6-217ENST00000636964 DRAM2Q6UX65 266 aa9.95□□□□□ -0.82
CLN6-217ENST00000636964 C1QL2Q7Z5L3 287 aa9.95□□□□□ -0.82
CLN6-217ENST00000636964 ISOC2Q96AB3 205 aa9.95□□□□□ -0.82
CLN6-217ENST00000636964 REEP6Q96HR9 211 aa9.95□□□□□ -0.82
CLN6-217ENST00000636964 OR6C6A6NF89 314 aa9.95□□□□□ -0.82
CLN6-217ENST00000636964 SLC22A20A6NK97 555 aa9.95□□□□□ -0.82
CLN6-217ENST00000636964 A6NLC8 198 aa9.95□□□□□ -0.82
CLN6-217ENST00000636964 KLK10O43240 276 aa9.95□□□□□ -0.82
CLN6-217ENST00000636964 IGLV3-1P01715 115 aa9.95□□□□□ -0.82
CLN6-217ENST00000636964 IFNA6P05013 189 aa9.95□□□□□ -0.82
CLN6-217ENST00000636964 MMP7P09237 267 aaPredicted RBP9.95□□□□□ -0.82
CLN6-217ENST00000636964 ZNF735P0CB33 412 aa9.95□□□□□ -0.82
CLN6-217ENST00000636964 GAGE1Q13065 139 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms