RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 TMEM187Q14656 261 aa16.17■□□□□ 0.18
CLN5-216ENST00000636780 CNTNAP3BQ96NU0 1288 aa16.17■□□□□ 0.18
CLN5-216ENST00000636780 CNTNAP3Q9BZ76 1288 aa16.17■□□□□ 0.18
CLN5-216ENST00000636780 MED9Q9NWA0 146 aa16.17■□□□□ 0.18
CLN5-216ENST00000636780 TRIM77I1YAP6 450 aa16.17■□□□□ 0.18
CLN5-216ENST00000636780 NME2P1O60361 137 aa16.17■□□□□ 0.18
CLN5-216ENST00000636780 RPL12P30050 165 aaKnown RBP16.17■□□□□ 0.18
CLN5-216ENST00000636780 CLN3Q13286 438 aa16.17■□□□□ 0.18
CLN5-216ENST00000636780 HERPUD1Q15011 391 aa16.17■□□□□ 0.18
CLN5-216ENST00000636780 ESRP2Q9H6T0 727 aaKnown RBP16.17■□□□□ 0.18
CLN5-216ENST00000636780 TNRC6AQ8NDV7 1962 aaKnown RBP16.16■□□□□ 0.18
CLN5-216ENST00000636780 KRBOX1C9JBD0 128 aa16.16■□□□□ 0.18
CLN5-216ENST00000636780 HSD17B6O14756 317 aa16.16■□□□□ 0.18
CLN5-216ENST00000636780 FHITP49789 147 aa16.16■□□□□ 0.18
CLN5-216ENST00000636780 IZUMO4Q1ZYL8 232 aa16.16■□□□□ 0.18
CLN5-216ENST00000636780 ZNF766Q5HY98 468 aa16.16■□□□□ 0.18
CLN5-216ENST00000636780 ZDHHC23Q8IYP9 409 aa16.16■□□□□ 0.18
CLN5-216ENST00000636780 OR4A4PQ8NGN8 299 aa16.16■□□□□ 0.18
CLN5-216ENST00000636780 NAA60Q9H7X0 242 aa16.16■□□□□ 0.18
CLN5-216ENST00000636780 ZNF286AQ9HBT8 521 aa16.16■□□□□ 0.18
CLN5-216ENST00000636780 FBXL17Q9UF56 701 aa16.16■□□□□ 0.18
CLN5-216ENST00000636780 PTPRZ1P23471 2315 aaPredicted RBP16.16■□□□□ 0.18
CLN5-216ENST00000636780 RRP8O43159 456 aaKnown RBP16.16■□□□□ 0.18
CLN5-216ENST00000636780 TMEM33P57088 247 aa16.16■□□□□ 0.18
CLN5-216ENST00000636780 NHLH2Q02577 135 aa16.16■□□□□ 0.18
CLN5-216ENST00000636780 ZNF528Q3MIS6 628 aa16.16■□□□□ 0.18
CLN5-216ENST00000636780 FAM53AQ6NSI3 398 aaPredicted RBP16.16■□□□□ 0.18
CLN5-216ENST00000636780 WDYHV1Q96HA8 205 aa16.16■□□□□ 0.18
CLN5-216ENST00000636780 MAGT1Q9H0U3 335 aa16.16■□□□□ 0.18
CLN5-216ENST00000636780 RGCCQ9H4X1 137 aa16.16■□□□□ 0.18
CLN5-216ENST00000636780 IGKV1-6A0A0C4DH72 117 aa16.15■□□□□ 0.18
CLN5-216ENST00000636780 C1QL1O75973 258 aa16.15■□□□□ 0.18
CLN5-216ENST00000636780 MST1LQ2TV78 715 aa16.15■□□□□ 0.18
CLN5-216ENST00000636780 CXorf67Q86X51 503 aaPredicted RBP16.15■□□□□ 0.18
CLN5-216ENST00000636780 LDLRAD3Q86YD5 345 aa16.15■□□□□ 0.18
CLN5-216ENST00000636780 LILRB1Q8NHL6 650 aaPredicted RBP16.15■□□□□ 0.18
CLN5-216ENST00000636780 MARC2Q969Z3 335 aa16.15■□□□□ 0.18
CLN5-216ENST00000636780 AIFM2Q9BRQ8 373 aa16.15■□□□□ 0.18
CLN5-216ENST00000636780 ZDHHC8Q9ULC8 765 aa16.15■□□□□ 0.18
CLN5-216ENST00000636780 FZR1Q9UM11 496 aa16.15■□□□□ 0.18
CLN5-216ENST00000636780 CADP27708 2225 aa16.15■□□□□ 0.18
CLN5-216ENST00000636780 K7EPK0 472 aa16.15■□□□□ 0.18
CLN5-216ENST00000636780 AGFG2O95081 481 aa16.15■□□□□ 0.18
CLN5-216ENST00000636780 PPYP01298 95 aa16.15■□□□□ 0.18
CLN5-216ENST00000636780 GNRHRP30968 328 aa16.15■□□□□ 0.18
CLN5-216ENST00000636780 LPAR6P43657 344 aa16.15■□□□□ 0.18
CLN5-216ENST00000636780 IDH3GP51553 393 aaPredicted RBP16.15■□□□□ 0.18
CLN5-216ENST00000636780 SOX8P57073 446 aa16.15■□□□□ 0.18
CLN5-216ENST00000636780 FAM71E2Q8N5Q1 922 aa16.15■□□□□ 0.18
CLN5-216ENST00000636780 SLC35G3Q8N808 338 aa16.15■□□□□ 0.18
CLN5-216ENST00000636780 FDCSPQ8NFU4 85 aa16.15■□□□□ 0.18
CLN5-216ENST00000636780 TRGV5A0A0B4J1U4 118 aa16.14■□□□□ 0.17
CLN5-216ENST00000636780 KLRC4-KLRK1H3BQV0 150 aa16.14■□□□□ 0.17
CLN5-216ENST00000636780 SNAPC5O75971 98 aa16.14■□□□□ 0.17
CLN5-216ENST00000636780 CEACAM21Q3KPI0 293 aa16.14■□□□□ 0.17
CLN5-216ENST00000636780 SLC30A7Q8NEW0 376 aa16.14■□□□□ 0.17
CLN5-216ENST00000636780 IL1F10Q8WWZ1 152 aa16.14■□□□□ 0.17
CLN5-216ENST00000636780 TAF9BQ9HBM6 251 aa16.14■□□□□ 0.17
CLN5-216ENST00000636780 WFDC1Q9HC57 220 aa16.14■□□□□ 0.17
CLN5-216ENST00000636780 PARD6AQ9NPB6 346 aa16.14■□□□□ 0.17
CLN5-216ENST00000636780 ARHGAP21Q5T5U3 1957 aa16.14■□□□□ 0.17
CLN5-216ENST00000636780 DTYMKP23919 212 aa16.14■□□□□ 0.17
CLN5-216ENST00000636780 ZNF818PQ6ZRF7 136 aa16.14■□□□□ 0.17
CLN5-216ENST00000636780 APOBEC3DQ96AK3 386 aaPredicted RBP16.14■□□□□ 0.17
CLN5-216ENST00000636780 AQP10Q96PS8 301 aa16.14■□□□□ 0.17
CLN5-216ENST00000636780 LINC00470Q9BZP3 86 aa16.14■□□□□ 0.17
CLN5-216ENST00000636780 EDARQ9UNE0 448 aa16.14■□□□□ 0.17
CLN5-216ENST00000636780 AMDHD2Q9Y303 409 aa16.14■□□□□ 0.17
CLN5-216ENST00000636780 SLC22A20A6NK97 555 aa16.13■□□□□ 0.17
CLN5-216ENST00000636780 OMGP23515 440 aa16.13■□□□□ 0.17
CLN5-216ENST00000636780 CEBPDP49716 269 aaPredicted RBP16.13■□□□□ 0.17
CLN5-216ENST00000636780 PLP2Q04941 152 aa16.13■□□□□ 0.17
CLN5-216ENST00000636780 EIF3IQ13347 325 aaKnown RBP16.13■□□□□ 0.17
CLN5-216ENST00000636780 ARL6IP1Q15041 203 aa16.13■□□□□ 0.17
CLN5-216ENST00000636780 TMEM268Q5VZI3 342 aa16.13■□□□□ 0.17
CLN5-216ENST00000636780 MSI2Q96DH6 328 aaKnown RBP16.13■□□□□ 0.17
CLN5-216ENST00000636780 CCL28Q9NRJ3 127 aa16.13■□□□□ 0.17
CLN5-216ENST00000636780 KCNIP3Q9Y2W7 256 aa16.13■□□□□ 0.17
CLN5-216ENST00000636780 DEDDO75618 318 aa16.13■□□□□ 0.17
CLN5-216ENST00000636780 IFNA21P01568 189 aa16.13■□□□□ 0.17
CLN5-216ENST00000636780 CD46P15529 392 aa16.13■□□□□ 0.17
CLN5-216ENST00000636780 HERV-K104P61576 105 aa16.13■□□□□ 0.17
CLN5-216ENST00000636780 SURF2Q15527 256 aaPredicted RBP16.13■□□□□ 0.17
CLN5-216ENST00000636780 GAPTQ8N292 157 aa16.13■□□□□ 0.17
CLN5-216ENST00000636780 PRRX2Q99811 253 aa16.13■□□□□ 0.17
CLN5-216ENST00000636780 OR2J1Q9GZK6 312 aa16.13■□□□□ 0.17
CLN5-216ENST00000636780 TREM1Q9NP99 234 aa16.13■□□□□ 0.17
CLN5-216ENST00000636780 DECR2Q9NUI1 292 aa16.13■□□□□ 0.17
CLN5-216ENST00000636780 KLF13Q9Y2Y9 288 aaPredicted RBP16.13■□□□□ 0.17
CLN5-216ENST00000636780 NKX2-6A6NCS4 301 aa16.12■□□□□ 0.17
CLN5-216ENST00000636780 H0YL77 283 aa16.12■□□□□ 0.17
CLN5-216ENST00000636780 TRAPPC2LH3BP13 241 aa16.12■□□□□ 0.17
CLN5-216ENST00000636780 CA11O75493 328 aa16.12■□□□□ 0.17
CLN5-216ENST00000636780 MED6O75586 246 aa16.12■□□□□ 0.17
CLN5-216ENST00000636780 CNEP1R1Q8N9A8 125 aa16.12■□□□□ 0.17
CLN5-216ENST00000636780 ZFP62Q8NB50 900 aaPredicted RBP16.12■□□□□ 0.17
CLN5-216ENST00000636780 USB1Q9BQ65 265 aaKnown RBP16.12■□□□□ 0.17
CLN5-216ENST00000636780 TLNRD1Q9H1K6 362 aa16.12■□□□□ 0.17
CLN5-216ENST00000636780 SH3BGRL3Q9H299 93 aa16.12■□□□□ 0.17
CLN5-216ENST00000636780 PCP4L1A6NKN8 68 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms