RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 MEGF11A6BM72 1044 aa14.44□□□□□ -0.1
PNKP-225ENST00000636214 E9PQ18 207 aa14.44□□□□□ -0.1
PNKP-225ENST00000636214 EBAG9O00559 213 aa14.44□□□□□ -0.1
PNKP-225ENST00000636214 ALX3O95076 343 aa14.44□□□□□ -0.1
PNKP-225ENST00000636214 ZFPL1O95159 310 aa14.44□□□□□ -0.1
PNKP-225ENST00000636214 BAG2O95816 211 aa14.44□□□□□ -0.1
PNKP-225ENST00000636214 CD2P06729 351 aa14.44□□□□□ -0.1
PNKP-225ENST00000636214 RAB3AP20336 220 aa14.44□□□□□ -0.1
PNKP-225ENST00000636214 CEACAM3P40198 252 aa14.44□□□□□ -0.1
PNKP-225ENST00000636214 VDAC2P45880 294 aaPredicted RBP14.44□□□□□ -0.1
PNKP-225ENST00000636214 MTNR1BP49286 362 aa14.44□□□□□ -0.1
PNKP-225ENST00000636214 AESQ08117 197 aa14.44□□□□□ -0.1
PNKP-225ENST00000636214 NSUN5P1Q3KNT7 163 aa14.44□□□□□ -0.1
PNKP-225ENST00000636214 ZNF691Q5VV52 312 aa14.44□□□□□ -0.1
PNKP-225ENST00000636214 CCBE1Q6UXH8 406 aaPredicted RBP14.44□□□□□ -0.1
PNKP-225ENST00000636214 SATL1Q86VE3 508 aa14.44□□□□□ -0.1
PNKP-225ENST00000636214 C1QL4Q86Z23 238 aa14.44□□□□□ -0.1
PNKP-225ENST00000636214 PQLC1Q8N2U9 271 aa14.44□□□□□ -0.1
PNKP-225ENST00000636214 PARP16Q8N5Y8 322 aa14.44□□□□□ -0.1
PNKP-225ENST00000636214 CFHR4Q92496 578 aa14.44□□□□□ -0.1
PNKP-225ENST00000636214 STMN2Q93045 179 aa14.44□□□□□ -0.1
PNKP-225ENST00000636214 FAM192AQ9GZU8 254 aa14.44□□□□□ -0.1
PNKP-225ENST00000636214 OR6C3Q9NZP0 311 aa14.44□□□□□ -0.1
PNKP-225ENST00000636214 LEUTXA8MZ59 168 aa14.43□□□□□ -0.1
PNKP-225ENST00000636214 CSN2P05814 226 aa14.43□□□□□ -0.1
PNKP-225ENST00000636214 LMO1P25800 156 aa14.43□□□□□ -0.1
PNKP-225ENST00000636214 GLIPR1P48060 266 aa14.43□□□□□ -0.1
PNKP-225ENST00000636214 PRRX1P54821 245 aa14.43□□□□□ -0.1
PNKP-225ENST00000636214 EMX1Q04741 257 aaPredicted RBP14.43□□□□□ -0.1
PNKP-225ENST00000636214 HABP2Q14520 560 aaPredicted RBP14.43□□□□□ -0.1
PNKP-225ENST00000636214 ATXN7L3Q14CW9 347 aaPredicted RBP14.43□□□□□ -0.1
PNKP-225ENST00000636214 LDLRAD2Q5SZI1 272 aa14.43□□□□□ -0.1
PNKP-225ENST00000636214 TMPRSS11AQ6ZMR5 421 aa14.43□□□□□ -0.1
PNKP-225ENST00000636214 Q8N2B8 174 aa14.43□□□□□ -0.1
PNKP-225ENST00000636214 OR52I1Q8NGK6 324 aa14.43□□□□□ -0.1
PNKP-225ENST00000636214 OR4P4Q8NGL7 312 aa14.43□□□□□ -0.1
PNKP-225ENST00000636214 CORO2AQ92828 525 aa14.43□□□□□ -0.1
PNKP-225ENST00000636214 NR1H4Q96RI1 486 aaPredicted RBP14.43□□□□□ -0.1
PNKP-225ENST00000636214 SLC29A1Q99808 456 aa14.43□□□□□ -0.1
PNKP-225ENST00000636214 FAM118AQ9NWS6 357 aa14.43□□□□□ -0.1
PNKP-225ENST00000636214 A0A0G2JK05 382 aa14.42□□□□□ -0.1
PNKP-225ENST00000636214 IRGMA1A4Y4 181 aa14.42□□□□□ -0.1
PNKP-225ENST00000636214 FAM172BPA6NC97 362 aa14.42□□□□□ -0.1
PNKP-225ENST00000636214 SLC33A1O00400 549 aaPredicted RBP14.42□□□□□ -0.1
PNKP-225ENST00000636214 MMP23AO75900 390 aa14.42□□□□□ -0.1
PNKP-225ENST00000636214 OPN1MWP04001 364 aa14.42□□□□□ -0.1
PNKP-225ENST00000636214 OPN1MW2P0DN77 364 aa14.42□□□□□ -0.1
PNKP-225ENST00000636214 OPN1MW3P0DN78 364 aa14.42□□□□□ -0.1
PNKP-225ENST00000636214 GLP1RP43220 463 aa14.42□□□□□ -0.1
PNKP-225ENST00000636214 BDH1Q02338 343 aa14.42□□□□□ -0.1
PNKP-225ENST00000636214 MED21Q13503 144 aa14.42□□□□□ -0.1
PNKP-225ENST00000636214 RBM39Q14498 530 aaKnown RBP14.42□□□□□ -0.1
PNKP-225ENST00000636214 RSU1Q15404 277 aa14.42□□□□□ -0.1
PNKP-225ENST00000636214 PAN3Q58A45 887 aaKnown RBP14.42□□□□□ -0.1
PNKP-225ENST00000636214 C16orf82Q7Z2V1 217 aa14.42□□□□□ -0.1
PNKP-225ENST00000636214 OR4F17Q8NGA8 305 aa14.42□□□□□ -0.1
PNKP-225ENST00000636214 GPR148Q8TDV2 347 aa14.42□□□□□ -0.1
PNKP-225ENST00000636214 TNFAIP8L1Q8WVP5 186 aa14.42□□□□□ -0.1
PNKP-225ENST00000636214 OR4F4Q96R69 305 aa14.42□□□□□ -0.1
PNKP-225ENST00000636214 OR5M11Q96RB7 305 aa14.42□□□□□ -0.1
PNKP-225ENST00000636214 SMPD3Q9NY59 655 aaPredicted RBP14.42□□□□□ -0.1
PNKP-225ENST00000636214 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.42□□□□□ -0.1
PNKP-225ENST00000636214 PLXNB1O43157 2135 aa14.41□□□□□ -0.1
PNKP-225ENST00000636214 ZNF729A6NN14 1252 aaPredicted RBP14.41□□□□□ -0.1
PNKP-225ENST00000636214 H0YJX3 145 aa14.41□□□□□ -0.1
PNKP-225ENST00000636214 HSPB6O14558 160 aa14.41□□□□□ -0.1
PNKP-225ENST00000636214 MYL12AP19105 171 aa14.41□□□□□ -0.1
PNKP-225ENST00000636214 NFYBP25208 207 aa14.41□□□□□ -0.1
PNKP-225ENST00000636214 SOX2P48431 317 aa14.41□□□□□ -0.1
PNKP-225ENST00000636214 ZP1P60852 638 aa14.41□□□□□ -0.1
PNKP-225ENST00000636214 PPP3R1P63098 170 aa14.41□□□□□ -0.1
PNKP-225ENST00000636214 ZSCAN26Q16670 478 aa14.41□□□□□ -0.1
PNKP-225ENST00000636214 CCDC144NLQ6NUI1 221 aa14.41□□□□□ -0.1
PNKP-225ENST00000636214 Q6P435 159 aa14.41□□□□□ -0.1
PNKP-225ENST00000636214 RNF144BQ7Z419 303 aa14.41□□□□□ -0.1
PNKP-225ENST00000636214 ZNF565Q8N9K5 539 aa14.41□□□□□ -0.1
PNKP-225ENST00000636214 PXT1Q8NFP0 134 aa14.41□□□□□ -0.1
PNKP-225ENST00000636214 RDH12Q96NR8 316 aa14.41□□□□□ -0.1
PNKP-225ENST00000636214 S100A13Q99584 98 aa14.41□□□□□ -0.1
PNKP-225ENST00000636214 JAM3Q9BX67 310 aa14.41□□□□□ -0.1
PNKP-225ENST00000636214 BARHL1Q9BZE3 327 aa14.41□□□□□ -0.1
PNKP-225ENST00000636214 SERTAD4Q9NUC0 356 aa14.41□□□□□ -0.1
PNKP-225ENST00000636214 MRPS18AQ9NVS2 196 aaKnown RBP14.41□□□□□ -0.1
PNKP-225ENST00000636214 E9PI62 339 aa14.4□□□□□ -0.1
PNKP-225ENST00000636214 XPNPEP2O43895 674 aa14.4□□□□□ -0.1
PNKP-225ENST00000636214 CD28P10747 220 aa14.4□□□□□ -0.1
PNKP-225ENST00000636214 JUNBP17275 347 aaPredicted RBP14.4□□□□□ -0.1
PNKP-225ENST00000636214 DCKP27707 260 aa14.4□□□□□ -0.1
PNKP-225ENST00000636214 MNDAP41218 407 aa14.4□□□□□ -0.1
PNKP-225ENST00000636214 IL13RA2Q14627 380 aa14.4□□□□□ -0.1
PNKP-225ENST00000636214 CCDC58Q4VC31 144 aa14.4□□□□□ -0.1
PNKP-225ENST00000636214 RPL22L1Q6P5R6 122 aaKnown RBP14.4□□□□□ -0.1
PNKP-225ENST00000636214 NDUFA11Q86Y39 141 aa14.4□□□□□ -0.1
PNKP-225ENST00000636214 LYG1Q8N1E2 194 aa14.4□□□□□ -0.1
PNKP-225ENST00000636214 R3HDM4Q96D70 268 aa14.4□□□□□ -0.1
PNKP-225ENST00000636214 COQ2Q96H96 371 aa14.4□□□□□ -0.1
PNKP-225ENST00000636214 CHCHD3Q9NX63 227 aaKnown RBP14.4□□□□□ -0.1
PNKP-225ENST00000636214 AMMECR1Q9Y4X0 333 aaPredicted RBP14.4□□□□□ -0.1
PNKP-225ENST00000636214 MEIKINA0A087WXM9 373 aa14.39□□□□□ -0.11
PNKP-225ENST00000636214 FAM90A22PA8MWA6 464 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms