RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 FAM74A7A6NL05 159 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 MBTPS2O43462 519 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 TCF21O43680 179 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 AKR7A3O95154 331 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 APCSP02743 223 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 HLA-GP17693 338 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 TAF1P21675 1872 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 FOXC1Q12948 553 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 OR52B4Q8NGK2 314 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 DOK4Q8TEW6 326 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 NUDT8Q8WV74 236 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 RHNO1Q9BSD3 238 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 CACNG4Q9UBN1 327 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 CCL27Q9Y4X3 112 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 LOC107986453A0A1B0GWG9 222 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 DSCR4P56555 118 aaPredicted RBP5.39□□□□□ -1.55
SCN1A-212ENST00000636194 LOXL3P58215 753 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 TNXAQ16473 311 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 FAM106AQ4KMX7 169 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 NKAIN2Q5VXU1 208 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 ADAMTSL4Q6UY14 1074 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 ZNF600Q6ZNG1 722 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 GLIS3Q8NEA6 775 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 FGF13Q92913 245 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 SLAMF6Q96DU3 332 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 PIMREGQ9BSJ6 248 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 COL11A1P12107 1806 aaPredicted RBP5.39□□□□□ -1.55
SCN1A-212ENST00000636194 TRGV5A0A0B4J1U4 118 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 PRRT4C9JH25 899 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 TDGF1P13385 188 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 OPRM1P35372 400 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 PNLIPRP2P54317 469 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 OR5AU1Q8NGC0 362 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 OR10AC1Q8NH08 325 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 C2orf50Q96LR7 162 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 OR2A5Q96R48 311 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 TCRBV7S2A1N4TA0A589 114 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 ALPLP05186 524 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 GABRA1P14867 456 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 TNFRSF1BP20333 461 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 ARRB2P32121 409 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 CTSCP53634 463 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 MEF2CQ06413 473 aaPredicted RBP5.39□□□□□ -1.55
SCN1A-212ENST00000636194 RTP2Q5QGT7 225 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 ZBTB37Q5TC79 503 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 SLC25A26Q70HW3 274 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 ETFBKMTQ8IXQ9 262 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 GMPPAQ96IJ6 420 aaPredicted RBP5.39□□□□□ -1.55
SCN1A-212ENST00000636194 ANGPTL4Q9BY76 406 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 A4GALTQ9NPC4 353 aa5.39□□□□□ -1.55
SCN1A-212ENST00000636194 TBL2Q9Y4P3 447 aaKnown RBP5.39□□□□□ -1.55
SCN1A-212ENST00000636194 SNRPGP15A8MWD9 76 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 H7C1C5 153 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 EREGO14944 169 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 PSCAO43653 123 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 ADRA2AP08913 450 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 FCGR2BP31994 310 aaPredicted RBP5.38□□□□□ -1.55
SCN1A-212ENST00000636194 SLC38A11Q08AI6 406 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 C10orf113Q5VZT2 155 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 VKORC1L1Q8N0U8 176 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 NANOGP1Q8N7R0 232 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 BCORP1Q8N888 145 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 OR52N1Q8NH53 320 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 GPBAR1Q8TDU6 330 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 JMJD8Q96S16 334 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 DOK1Q99704 481 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 ASCL3Q9NQ33 180 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 CYB5R1Q9UHQ9 305 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 CHST2Q9Y4C5 530 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 HCFC1P51610 2035 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 C4AP0C0L4 1744 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 C4BP0C0L5 1744 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 TECTAO75443 2155 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 FRS3O43559 492 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 NPPBP16860 134 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 SUMO3P55854 103 aaPredicted RBP5.38□□□□□ -1.55
SCN1A-212ENST00000636194 OR8G5Q8NG78 346 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 SPSB1Q96BD6 273 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 FLYWCH2Q96CP2 140 aaKnown RBP5.38□□□□□ -1.55
SCN1A-212ENST00000636194 RAB33BQ9H082 229 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 RNF186Q9NXI6 227 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 LOXL2Q9Y4K0 774 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 RIMBP3CA6NJZ7 1639 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 RIMBP3BA6NNM3 1639 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 RIMBP3Q9UFD9 1639 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 DDX60LQ5H9U9 1706 aaKnown RBP5.38□□□□□ -1.55
SCN1A-212ENST00000636194 C1QTNF9BB2RNN3 333 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 CXorf1O96002 111 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 CKS2P33552 79 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 GNG10P50151 68 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 TMEM33P57088 247 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 MRGPRGQ86SM5 289 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 C7orf43Q8WVR3 580 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 A0A1B0GUL6 1792 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 PSMB11A5LHX3 300 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 CCSO14618 274 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 ZNF83P51522 516 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 TDGF1P3P51864 188 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 TMEM258P61165 79 aa5.38□□□□□ -1.55
SCN1A-212ENST00000636194 ECSCRQ19T08 205 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms