RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 CHD9Q3L8U1 2897 aa12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 KNL1Q8NG31 2342 aa12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 IGLV3-12A0A075B6K2 115 aa12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 LOC102723971A0A1B0GUV8 181 aa12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 ARGFXA6NJG6 315 aa12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 GEMIN2O14893 280 aaKnown RBP12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 DHHO43323 396 aa12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 ONECUT2O95948 504 aa12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 FABP4P15090 132 aa12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 CD200P41217 278 aa12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 TAS2R30P59541 319 aa12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 IL24Q13007 206 aa12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 CPEB2Q7Z5Q1 589 aaKnown RBP12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 ZNF501Q96CX3 271 aaPredicted RBP12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 DKKL1Q9UK85 242 aa12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 PITPNC1Q9UKF7 332 aa12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 RFNGQ9Y644 331 aa12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 PCDH15Q96QU1 1955 aa12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 A0A087X0M5 115 aa12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 A0A1B0GX30 115 aa12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 SMCO3A2RU48 225 aa12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 SLC31A2O15432 143 aa12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 DFFBO76075 338 aa12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 ZFAND5O76080 213 aa12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 VAMP5O95183 116 aa12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 CYB5R3P00387 301 aaPredicted RBP12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 TCN2P20062 427 aa12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 SNAI3Q3KNW1 292 aa12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 GFI1BQ5VTD9 330 aa12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 FAM69BQ5VUD6 431 aa12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 SUMF1Q8NBK3 374 aa12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 OR10G3Q8NGC4 313 aa12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 ABHD5Q8WTS1 349 aa12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 FRZBQ92765 325 aa12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 PACRGQ96M98 296 aaPredicted RBP12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 ATP5SQ99766 215 aa12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 GLRX2Q9NS18 164 aa12.82□□□□□ -0.36
CACNA1A-220ENST00000635988 DNAH14Q0VDD8 3507 aa12.81□□□□□ -0.36
CACNA1A-220ENST00000635988 TRBV24-1A0A075B6N3 115 aa12.81□□□□□ -0.36
CACNA1A-220ENST00000635988 A0A1W2PR77 199 aa12.81□□□□□ -0.36
CACNA1A-220ENST00000635988 TAS2R60P59551 318 aa12.81□□□□□ -0.36
CACNA1A-220ENST00000635988 H3F3AP84243 136 aa12.81□□□□□ -0.36
CACNA1A-220ENST00000635988 ID3Q02535 119 aa12.81□□□□□ -0.36
CACNA1A-220ENST00000635988 PDZD11Q5EBL8 140 aa12.81□□□□□ -0.36
CACNA1A-220ENST00000635988 C20orf196Q8IYI0 205 aa12.81□□□□□ -0.36
CACNA1A-220ENST00000635988 H1FOOQ8IZA3 346 aaPredicted RBP12.81□□□□□ -0.36
CACNA1A-220ENST00000635988 ST3GAL6Q9Y274 331 aa12.81□□□□□ -0.36
CACNA1A-220ENST00000635988 MTCH2Q9Y6C9 303 aa12.81□□□□□ -0.36
CACNA1A-220ENST00000635988 IGKV1-27A0A075B6S5 117 aa12.81□□□□□ -0.36
CACNA1A-220ENST00000635988 A0A1B0GV90 55 aa12.81□□□□□ -0.36
CACNA1A-220ENST00000635988 FAM221AA4D161 298 aa12.81□□□□□ -0.36
CACNA1A-220ENST00000635988 OPN1MWP04001 364 aa12.81□□□□□ -0.36
CACNA1A-220ENST00000635988 OPN1MW2P0DN77 364 aa12.81□□□□□ -0.36
CACNA1A-220ENST00000635988 OPN1MW3P0DN78 364 aa12.81□□□□□ -0.36
CACNA1A-220ENST00000635988 CD27P26842 260 aa12.81□□□□□ -0.36
CACNA1A-220ENST00000635988 PIGYQ3MUY2 71 aa12.81□□□□□ -0.36
CACNA1A-220ENST00000635988 RHBDD2Q6NTF9 364 aa12.81□□□□□ -0.36
CACNA1A-220ENST00000635988 SELENOHQ8IZQ5 122 aaKnown RBP12.81□□□□□ -0.36
CACNA1A-220ENST00000635988 DYRK2Q92630 601 aa12.81□□□□□ -0.36
CACNA1A-220ENST00000635988 TMEM106CQ9BVX2 250 aa12.81□□□□□ -0.36
CACNA1A-220ENST00000635988 RBM24Q9BX46 236 aaKnown RBP12.81□□□□□ -0.36
CACNA1A-220ENST00000635988 CTDSP1Q9GZU7 261 aa12.81□□□□□ -0.36
CACNA1A-220ENST00000635988 ZNF581Q9P0T4 197 aa12.81□□□□□ -0.36
CACNA1A-220ENST00000635988 MYOTQ9UBF9 498 aa12.81□□□□□ -0.36
CACNA1A-220ENST00000635988 ZNF391Q9UJN7 358 aa12.81□□□□□ -0.36
CACNA1A-220ENST00000635988 PIGBOS1A0A0B4J2F0 54 aa12.8□□□□□ -0.36
CACNA1A-220ENST00000635988 CST7O76096 145 aa12.8□□□□□ -0.36
CACNA1A-220ENST00000635988 VDAC1P21796 283 aa12.8□□□□□ -0.36
CACNA1A-220ENST00000635988 CFHR1Q03591 330 aa12.8□□□□□ -0.36
CACNA1A-220ENST00000635988 CXorf66Q5JRM2 361 aaPredicted RBP12.8□□□□□ -0.36
CACNA1A-220ENST00000635988 FAM27BQ5VT28 67 aa12.8□□□□□ -0.36
CACNA1A-220ENST00000635988 TBC1D26Q86UD7 250 aa12.8□□□□□ -0.36
CACNA1A-220ENST00000635988 FADS6Q8N9I5 356 aa12.8□□□□□ -0.36
CACNA1A-220ENST00000635988 MEGF10Q96KG7 1140 aa12.8□□□□□ -0.36
CACNA1A-220ENST00000635988 CISD1Q9NZ45 108 aaKnown RBP12.8□□□□□ -0.36
CACNA1A-220ENST00000635988 A0A1B0GU03 582 aa12.8□□□□□ -0.36
CACNA1A-220ENST00000635988 NPIPA2E9PIF3 369 aa12.8□□□□□ -0.36
CACNA1A-220ENST00000635988 NPIPA3F8WFD2 350 aa12.8□□□□□ -0.36
CACNA1A-220ENST00000635988 MKRN2OSH3BPM6 223 aa12.8□□□□□ -0.36
CACNA1A-220ENST00000635988 ADAM20O43506 726 aa12.8□□□□□ -0.36
CACNA1A-220ENST00000635988 PAX1P15863 534 aa12.8□□□□□ -0.36
CACNA1A-220ENST00000635988 FUT3P21217 361 aa12.8□□□□□ -0.36
CACNA1A-220ENST00000635988 CRYGSP22914 178 aa12.8□□□□□ -0.36
CACNA1A-220ENST00000635988 GNRHRP30968 328 aa12.8□□□□□ -0.36
CACNA1A-220ENST00000635988 RAB35Q15286 201 aa12.8□□□□□ -0.36
CACNA1A-220ENST00000635988 PHYHD1Q5SRE7 291 aa12.8□□□□□ -0.36
CACNA1A-220ENST00000635988 RABEPKQ7Z6M1 372 aa12.8□□□□□ -0.36
CACNA1A-220ENST00000635988 ZNF442Q9H7R0 627 aa12.8□□□□□ -0.36
CACNA1A-220ENST00000635988 DVL1O14640 695 aa12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 NRASP01111 189 aa12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 IFNA5P01569 189 aa12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 CD63P08962 238 aa12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 FUT6P51993 359 aa12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 FOXL2P58012 376 aa12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 RAB11AP62491 216 aa12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 MRPS34P82930 218 aaKnown RBP12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 RUNX1Q01196 453 aa12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 FOXO1Q12778 655 aa12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 NMSQ5H8A3 153 aa12.79□□□□□ -0.36
CACNA1A-220ENST00000635988 FAM90A2PQ658T7 463 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms