RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 PLA2G3Q9NZ20 509 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 GEMIN2O14893 280 aaKnown RBP3.94□□□□□ -1.78
SCN1A-210ENST00000635776 FGF2P09038 288 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 OPRM1P35372 400 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 KIR2DS2P43631 304 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 FAM180AQ6UWF9 173 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.94□□□□□ -1.78
SCN1A-210ENST00000635776 OR10V1Q8NGI7 309 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 GALMQ96C23 342 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 TRIB1Q96RU8 372 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 ADAT1Q9BUB4 502 aaKnown RBP3.94□□□□□ -1.78
SCN1A-210ENST00000635776 HEATR5BQ9P2D3 2071 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 C17orf51A8MQB3 221 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 ACAA1P09110 424 aaPredicted RBP3.94□□□□□ -1.78
SCN1A-210ENST00000635776 AADACP22760 399 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 GLRA1P23415 457 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 SPEM2Q0P670 501 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 SFRP5Q5T4F7 317 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 Q6ZT83 130 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 POM121L2Q96KW2 1035 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 EIF5A2Q9GZV4 153 aaKnown RBP3.94□□□□□ -1.78
SCN1A-210ENST00000635776 IGHG3P01860 377 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 ADH4P08319 380 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 SMUG1Q53HV7 270 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 POC1AQ8NBT0 407 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 OR10AD1Q8NGE0 317 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 OR5D13Q8NGL4 314 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 OR5P3Q8WZ94 311 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 BCL2L2Q92843 193 aaPredicted RBP3.94□□□□□ -1.78
SCN1A-210ENST00000635776 ADTRPQ96IZ2 230 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 TMEM222Q9H0R3 208 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 KCNK15Q9H427 330 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 HEXA-AS1Q9H8Q6 139 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 A0A096LPE4 126 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 A0A1W2PPZ6 126 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 TNFRSF1AP19438 455 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 DVL1P1P54792 670 aaPredicted RBP3.94□□□□□ -1.78
SCN1A-210ENST00000635776 Q5BKY6 102 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 TMEM255AQ5JRV8 349 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 Q8NFD4 153 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 MESP1Q9BRJ9 268 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 LOC101059948A0A1B0GTJ6 334 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 PQLC2LA1A4F0 135 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 IGHV3-9P01782 118 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 RAB7AP51149 207 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 STPG1Q5TH74 334 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 C9orf135Q5VTT2 229 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 MDS2Q8NDY4 140 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 SSC4DQ8WTU2 575 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 TCEAL7Q9BRU2 100 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 SEC11CQ9BY50 192 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 SPRY4Q9C004 299 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 WDR13Q9H1Z4 485 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 C12orf49Q9H741 205 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 FOXJ2Q9P0K8 574 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 TP53BP1Q12888 1972 aaPredicted RBP3.94□□□□□ -1.78
SCN1A-210ENST00000635776 RNF222A6NCQ9 220 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 MFSD2BA6NFX1 497 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 DEDDO75618 318 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 FTH1P19P0C7X4 201 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 NAXEQ8NCW5 288 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 EGLN1Q9GZT9 426 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 PROK2Q9HC23 129 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 Q9N2K0 584 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 NDRG3Q9UGV2 375 aa3.94□□□□□ -1.78
SCN1A-210ENST00000635776 OOEPA6NGQ2 149 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 DBX1A6NMT0 343 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 ATF4P18848 351 aaPredicted RBP3.93□□□□□ -1.78
SCN1A-210ENST00000635776 GPM6AP51674 278 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 C17orf107Q6ZR85 190 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 OR2C3Q8N628 320 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 C1orf147Q96MC9 270 aaPredicted RBP3.93□□□□□ -1.78
SCN1A-210ENST00000635776 KLHDC3Q9BQ90 382 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 SMCO4Q9NRQ5 59 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 LPAR3Q9UBY5 353 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 TUBD1Q9UJT1 453 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 NKX6-3A6NJ46 265 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 F8VVB4 439 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 F8VWA3 439 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 LMX1BO60663 402 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 RFPL3SP0C7P2 107 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 LYL1P12980 280 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 FLI1Q01543 452 aaPredicted RBP3.93□□□□□ -1.78
SCN1A-210ENST00000635776 SNAI3Q3KNW1 292 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 DCAF12L2Q5VW00 463 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 TMED6Q8WW62 240 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 CORO2AQ92828 525 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 LSM10Q969L4 123 aaKnown RBP3.93□□□□□ -1.78
SCN1A-210ENST00000635776 NKX6-2Q9C056 277 aaPredicted RBP3.93□□□□□ -1.78
SCN1A-210ENST00000635776 ZDHHC11Q9H8X9 412 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 RPS10-NUDT3A0A1W2PQS6 291 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 SULT1A2P50226 295 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 TNFSF10P50591 281 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 UCNP55089 124 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 LY6G6FQ5SQ64 297 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 ZNF468Q5VIY5 522 aaPredicted RBP3.93□□□□□ -1.78
SCN1A-210ENST00000635776 ASPHD2Q6ICH7 369 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 LHFPL5Q8TAF8 219 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 TCEAL3Q969E4 200 aa3.93□□□□□ -1.78
SCN1A-210ENST00000635776 LYZL4Q96KX0 146 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms