RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 A0A0A6YYJ9 748 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 S1PR2O95136 353 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 CSN3P07498 182 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 ZXDAP98168 799 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 LRRC75BQ2VPJ9 315 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 PABPC1L2AQ5JQF8 200 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 ANKRD37Q7Z713 158 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 TMEM99Q8N816 258 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 OR8A1Q8NGG7 326 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 OR10G4Q8NGN3 311 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 OR10G9Q8NGN4 311 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 OR10G7Q8NGN6 311 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 OR4A5Q8NH83 315 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 CT55Q8WUE5 264 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 OR5M11Q96RB7 305 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 SH3BGRL3Q9H299 93 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 CHD5Q8TDI0 1954 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 AHCTF1Q8WYP5 2266 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 SSC5DA1L4H1 1573 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 IGKV3D-15A0A087WSY6 115 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 PRRT4C9JH25 899 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 IGKV3-15P01624 115 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 SBK3P0C264 359 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 MAS1LP35410 378 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 PMS2P11Q13670 270 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 BAP18Q8IXM2 172 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 ZNF502Q8TBZ5 544 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 SNX22Q96L94 193 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 HARBI1Q96MB7 349 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 TP53RKQ96S44 253 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 TMEM140Q9NV12 185 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 CACNG5Q9UF02 275 aa4.94□□□□□ -1.62
SCN1A-209ENST00000635750 SCN9AQ15858 1988 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 TFPI2P48307 235 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 RPL24P83731 157 aaKnown RBP4.93□□□□□ -1.62
SCN1A-209ENST00000635750 MIDNQ504T8 468 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 CXorf66Q5JRM2 361 aaPredicted RBP4.93□□□□□ -1.62
SCN1A-209ENST00000635750 B3GNT9Q6UX72 402 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 THSD4Q6ZMP0 1018 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 LIAT1Q6ZQX7 453 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 OR52B4Q8NGK2 314 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 R3HDM4Q96D70 268 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 SLC25A10Q9UBX3 287 aaPredicted RBP4.93□□□□□ -1.62
SCN1A-209ENST00000635750 PI4KAP42356 2102 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 GHRHP01286 108 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 RPLP1P05386 114 aaKnown RBP4.93□□□□□ -1.62
SCN1A-209ENST00000635750 MYF5P13349 255 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 BTF3P20290 206 aaKnown RBP4.93□□□□□ -1.62
SCN1A-209ENST00000635750 TNFSF10P50591 281 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 TCTAP57738 103 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 GPNMBQ14956 572 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 C1orf220Q5T0J3 134 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 MDP1Q86V88 176 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 FAM26EQ8N5C1 309 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 ZDHHC22Q8N966 263 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 CCL4L1Q8NHW4 92 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 FAM222BQ8WU58 562 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 SMIM14Q96QK8 99 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 C19orf43Q9BQ61 176 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 PHLDA3Q9Y5J5 127 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 IGKV3D-11A0A0A0MRZ8 115 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 TRAV1-2A0A0B4J238 106 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 A0A1B0GUH1 482 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 TRDCB7Z8K6 153 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 CD3DP04234 171 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 IGKV3-11P04433 115 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 ZNF32P17041 273 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 GZMHP20718 246 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 SLC6A1P30531 599 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 CCSMST1Q4G0I0 132 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 MOGAT3Q86VF5 341 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 OR1L8Q8NGR8 309 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 OR4X1Q8NH49 305 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 SLC52A3Q9NQ40 469 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 ZMIZ1Q9ULJ6 1067 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 MAP1BP46821 2468 aaKnown RBP4.93□□□□□ -1.62
SCN1A-209ENST00000635750 CKAP5Q14008 2032 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 SPTY2D1-AS1A0A0U1RR47 76 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 IFNL4K9M1U5 179 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 NPFFO15130 113 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 GPX2P18283 190 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 ZFP36L2P47974 494 aaKnown RBP4.93□□□□□ -1.62
SCN1A-209ENST00000635750 SNRPD3P62318 126 aaKnown RBP4.93□□□□□ -1.62
SCN1A-209ENST00000635750 FZD5Q13467 585 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 COTL1Q14019 142 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 MMDQ15546 238 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 KRTCAP3Q53RY4 240 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 ZNF774Q6NX45 483 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 LILRA3Q8N6C8 439 aaPredicted RBP4.93□□□□□ -1.62
SCN1A-209ENST00000635750 OR5C1Q8NGR4 320 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 TMEM37Q8WXS4 190 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 ZNF707Q96C28 371 aaPredicted RBP4.93□□□□□ -1.62
SCN1A-209ENST00000635750 MS4A10Q96PG2 267 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 ALKBH7Q9BT30 221 aaPredicted RBP4.93□□□□□ -1.62
SCN1A-209ENST00000635750 TEX101Q9BY14 249 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 GPR61Q9BZJ8 451 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 GEMIN7Q9H840 131 aaKnown RBP4.93□□□□□ -1.62
SCN1A-209ENST00000635750 NTMQ9P121 344 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 HIGD1AQ9Y241 93 aa4.93□□□□□ -1.62
SCN1A-209ENST00000635750 IGLV3-10A0A075B6K4 115 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms