RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 PTGFRP43088 359 aa10.13□□□□□ -0.79
LINC00339-206ENST00000634451 MTCP1P56278 107 aa10.13□□□□□ -0.79
LINC00339-206ENST00000634451 DGCR2P98153 550 aa10.13□□□□□ -0.79
LINC00339-206ENST00000634451 NXNL2Q5VZ03 156 aa10.13□□□□□ -0.79
LINC00339-206ENST00000634451 C12orf73Q69YU5 71 aa10.13□□□□□ -0.79
LINC00339-206ENST00000634451 RTN4RL2Q86UN3 420 aa10.13□□□□□ -0.79
LINC00339-206ENST00000634451 SPATA24Q86W54 205 aa10.13□□□□□ -0.79
LINC00339-206ENST00000634451 ARHGAP24Q8N264 748 aa10.13□□□□□ -0.79
LINC00339-206ENST00000634451 OR10H4Q8NGA5 316 aa10.13□□□□□ -0.79
LINC00339-206ENST00000634451 OR51D1Q8NGF3 324 aa10.13□□□□□ -0.79
LINC00339-206ENST00000634451 OR51A4Q8NGJ6 313 aa10.13□□□□□ -0.79
LINC00339-206ENST00000634451 OR13A1Q8NGR1 328 aa10.13□□□□□ -0.79
LINC00339-206ENST00000634451 CORO2AQ92828 525 aa10.13□□□□□ -0.79
LINC00339-206ENST00000634451 GAL3ST2Q9H3Q3 398 aa10.13□□□□□ -0.79
LINC00339-206ENST00000634451 EXOSC4Q9NPD3 245 aaKnown RBP10.13□□□□□ -0.79
LINC00339-206ENST00000634451 A0A087X0M5 115 aa10.12□□□□□ -0.79
LINC00339-206ENST00000634451 IGHV3-72A0A0B4J1Y9 119 aa10.12□□□□□ -0.79
LINC00339-206ENST00000634451 A0A1B0GX30 115 aa10.12□□□□□ -0.79
LINC00339-206ENST00000634451 METTL15A6NJ78 407 aa10.12□□□□□ -0.79
LINC00339-206ENST00000634451 AQP12BA6NM10 295 aa10.12□□□□□ -0.79
LINC00339-206ENST00000634451 ZAR1LA6NP61 321 aa10.12□□□□□ -0.79
LINC00339-206ENST00000634451 SERPINE3A8MV23 424 aa10.12□□□□□ -0.79
LINC00339-206ENST00000634451 SLC33A1O00400 549 aaPredicted RBP10.12□□□□□ -0.79
LINC00339-206ENST00000634451 TOR1AO14656 332 aa10.12□□□□□ -0.79
LINC00339-206ENST00000634451 ZNF44P15621 663 aa10.12□□□□□ -0.79
LINC00339-206ENST00000634451 ATF1P18846 271 aa10.12□□□□□ -0.79
LINC00339-206ENST00000634451 MYCNOSP40205 109 aa10.12□□□□□ -0.79
LINC00339-206ENST00000634451 RBP2P50120 134 aa10.12□□□□□ -0.79
LINC00339-206ENST00000634451 GNG10P50151 68 aa10.12□□□□□ -0.79
LINC00339-206ENST00000634451 NANOS3P60323 173 aaKnown RBP10.12□□□□□ -0.79
LINC00339-206ENST00000634451 ZNF85Q03923 595 aa10.12□□□□□ -0.79
LINC00339-206ENST00000634451 PDZK1IP1Q13113 114 aa10.12□□□□□ -0.79
LINC00339-206ENST00000634451 KPNB1Q14974 876 aaKnown RBP10.12□□□□□ -0.79
LINC00339-206ENST00000634451 CDK5R1Q15078 307 aa10.12□□□□□ -0.79
LINC00339-206ENST00000634451 KRBOX4Q5JUW0 171 aa10.12□□□□□ -0.79
LINC00339-206ENST00000634451 AQP12AQ8IXF9 295 aa10.12□□□□□ -0.79
LINC00339-206ENST00000634451 ENTHD1Q8IYW4 607 aa10.12□□□□□ -0.79
LINC00339-206ENST00000634451 TOMM40LQ969M1 308 aa10.12□□□□□ -0.79
LINC00339-206ENST00000634451 RPEQ96AT9 228 aa10.12□□□□□ -0.79
LINC00339-206ENST00000634451 FGGYQ96C11 551 aa10.12□□□□□ -0.79
LINC00339-206ENST00000634451 SEBOXQ9HB31 216 aaPredicted RBP10.12□□□□□ -0.79
LINC00339-206ENST00000634451 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.12□□□□□ -0.79
LINC00339-206ENST00000634451 SORL1Q92673 2214 aa10.12□□□□□ -0.79
LINC00339-206ENST00000634451 CCL24O00175 119 aa10.11□□□□□ -0.79
LINC00339-206ENST00000634451 KDM4BO94953 1096 aa10.11□□□□□ -0.79
LINC00339-206ENST00000634451 IGKV1D-33P01593 117 aa10.11□□□□□ -0.79
LINC00339-206ENST00000634451 IGKV1-33P01594 117 aa10.11□□□□□ -0.79
LINC00339-206ENST00000634451 CGB3P0DN86 165 aa10.11□□□□□ -0.79
LINC00339-206ENST00000634451 CGB7P0DN87 165 aa10.11□□□□□ -0.79
LINC00339-206ENST00000634451 TMEM11P17152 192 aa10.11□□□□□ -0.79
LINC00339-206ENST00000634451 GLP1RP43220 463 aa10.11□□□□□ -0.79
LINC00339-206ENST00000634451 REG1BP48304 166 aa10.11□□□□□ -0.79
LINC00339-206ENST00000634451 MNAT1P51948 309 aa10.11□□□□□ -0.79
LINC00339-206ENST00000634451 ATP1B3P54709 279 aa10.11□□□□□ -0.79
LINC00339-206ENST00000634451 ISL1P61371 349 aa10.11□□□□□ -0.79
LINC00339-206ENST00000634451 HES1Q14469 280 aa10.11□□□□□ -0.79
LINC00339-206ENST00000634451 SPIN3Q5JUX0 258 aa10.11□□□□□ -0.79
LINC00339-206ENST00000634451 OR52W1Q6IF63 320 aa10.11□□□□□ -0.79
LINC00339-206ENST00000634451 ZNF695Q8IW36 515 aa10.11□□□□□ -0.79
LINC00339-206ENST00000634451 Q8IYB0 196 aa10.11□□□□□ -0.79
LINC00339-206ENST00000634451 OR13C9Q8NGT0 318 aa10.11□□□□□ -0.79
LINC00339-206ENST00000634451 RFESDQ8TAC1 157 aa10.11□□□□□ -0.79
LINC00339-206ENST00000634451 UTP4Q969X6 686 aaKnown RBP10.11□□□□□ -0.79
LINC00339-206ENST00000634451 TEX12Q9BXU0 123 aa10.11□□□□□ -0.79
LINC00339-206ENST00000634451 COMMD4Q9H0A8 199 aa10.11□□□□□ -0.79
LINC00339-206ENST00000634451 TAS2R3Q9NYW6 316 aa10.11□□□□□ -0.79
LINC00339-206ENST00000634451 SCOCQ9UIL1 159 aa10.11□□□□□ -0.79
LINC00339-206ENST00000634451 GNG8Q9UK08 70 aa10.11□□□□□ -0.79
LINC00339-206ENST00000634451 DNAH7Q8WXX0 4024 aa10.11□□□□□ -0.79
LINC00339-206ENST00000634451 TCRBV3S1A0A5B6 114 aa10.1□□□□□ -0.79
LINC00339-206ENST00000634451 J3QR06 171 aa10.1□□□□□ -0.79
LINC00339-206ENST00000634451 SH2D1BO14796 132 aa10.1□□□□□ -0.79
LINC00339-206ENST00000634451 FAM106CPP0CH98 169 aa10.1□□□□□ -0.79
LINC00339-206ENST00000634451 CALB2P22676 271 aa10.1□□□□□ -0.79
LINC00339-206ENST00000634451 LMO1P25800 156 aa10.1□□□□□ -0.79
LINC00339-206ENST00000634451 SSTR5P35346 364 aa10.1□□□□□ -0.79
LINC00339-206ENST00000634451 MNDAP41218 407 aa10.1□□□□□ -0.79
LINC00339-206ENST00000634451 ECI1P42126 302 aa10.1□□□□□ -0.79
LINC00339-206ENST00000634451 SLC35E3Q7Z769 313 aa10.1□□□□□ -0.79
LINC00339-206ENST00000634451 STPG2Q8N412 459 aa10.1□□□□□ -0.79
LINC00339-206ENST00000634451 DNAAF1Q8NEP3 725 aa10.1□□□□□ -0.79
LINC00339-206ENST00000634451 OR4D6Q8NGJ1 314 aa10.1□□□□□ -0.79
LINC00339-206ENST00000634451 OR2G2Q8NGZ5 317 aa10.1□□□□□ -0.79
LINC00339-206ENST00000634451 UBALD1Q8TB05 177 aa10.1□□□□□ -0.79
LINC00339-206ENST00000634451 PLPPR1Q8TBJ4 325 aa10.1□□□□□ -0.79
LINC00339-206ENST00000634451 OPALINQ96PE5 141 aa10.1□□□□□ -0.79
LINC00339-206ENST00000634451 MNTQ99583 582 aa10.1□□□□□ -0.79
LINC00339-206ENST00000634451 MCRIP2Q9BUT9 160 aaKnown RBP10.1□□□□□ -0.79
LINC00339-206ENST00000634451 ADI1Q9BV57 179 aa10.1□□□□□ -0.79
LINC00339-206ENST00000634451 GPR61Q9BZJ8 451 aa10.1□□□□□ -0.79
LINC00339-206ENST00000634451 DCLRE1BQ9H816 532 aa10.1□□□□□ -0.79
LINC00339-206ENST00000634451 H2AFY2Q9P0M6 372 aaPredicted RBP10.1□□□□□ -0.79
LINC00339-206ENST00000634451 KIF25Q9UIL4 384 aa10.1□□□□□ -0.79
LINC00339-206ENST00000634451 PSG11Q9UQ72 335 aa10.1□□□□□ -0.79
LINC00339-206ENST00000634451 KBTBD11-OT1A0A1B0GTJ5 212 aa10.09□□□□□ -0.79
LINC00339-206ENST00000634451 H3BUI4 141 aa10.09□□□□□ -0.79
LINC00339-206ENST00000634451 M0QZK8 103 aa10.09□□□□□ -0.79
LINC00339-206ENST00000634451 CEACAM3P40198 252 aa10.09□□□□□ -0.79
LINC00339-206ENST00000634451 ARHGDIBP52566 201 aa10.09□□□□□ -0.79
LINC00339-206ENST00000634451 PRRX1P54821 245 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms