RNA–Protein interactions for RNA: ENST00000629179.1

PNKP-223, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-223ENST00000629179 P2RX3P56373 397 aa11.55□□□□□ -0.56
PNKP-223ENST00000629179 AESQ08117 197 aa11.55□□□□□ -0.56
PNKP-223ENST00000629179 RIPK1Q13546 671 aa11.55□□□□□ -0.56
PNKP-223ENST00000629179 RSU1Q15404 277 aa11.55□□□□□ -0.56
PNKP-223ENST00000629179 BEND2Q8NDZ0 799 aa11.55□□□□□ -0.56
PNKP-223ENST00000629179 DYRK2Q92630 601 aa11.55□□□□□ -0.56
PNKP-223ENST00000629179 MYDGFQ969H8 173 aa11.55□□□□□ -0.56
PNKP-223ENST00000629179 ZNF747Q9BV97 191 aa11.55□□□□□ -0.56
PNKP-223ENST00000629179 PAK1IP1Q9NWT1 392 aaPredicted RBP11.55□□□□□ -0.56
PNKP-223ENST00000629179 SCN3BQ9NY72 215 aa11.55□□□□□ -0.56
PNKP-223ENST00000629179 NBEAL1Q6ZS30 2694 aa11.55□□□□□ -0.56
PNKP-223ENST00000629179 H0YHG0 523 aa11.54□□□□□ -0.56
PNKP-223ENST00000629179 GPX5O75715 221 aa11.54□□□□□ -0.56
PNKP-223ENST00000629179 MMP23AO75900 390 aa11.54□□□□□ -0.56
PNKP-223ENST00000629179 RBP4P02753 201 aa11.54□□□□□ -0.56
PNKP-223ENST00000629179 MYF6P23409 242 aa11.54□□□□□ -0.56
PNKP-223ENST00000629179 TGFBR2P37173 567 aa11.54□□□□□ -0.56
PNKP-223ENST00000629179 RAG2P55895 527 aa11.54□□□□□ -0.56
PNKP-223ENST00000629179 LGALS4P56470 323 aa11.54□□□□□ -0.56
PNKP-223ENST00000629179 PIGYQ3MUY2 71 aa11.54□□□□□ -0.56
PNKP-223ENST00000629179 RNLSQ5VYX0 342 aa11.54□□□□□ -0.56
PNKP-223ENST00000629179 LHFPL4Q7Z7J7 247 aa11.54□□□□□ -0.56
PNKP-223ENST00000629179 TRAPPC6BQ86SZ2 158 aa11.54□□□□□ -0.56
PNKP-223ENST00000629179 CHST4Q8NCG5 386 aa11.54□□□□□ -0.56
PNKP-223ENST00000629179 OR51T1Q8NGJ9 327 aa11.54□□□□□ -0.56
PNKP-223ENST00000629179 OR13D1Q8NGV5 346 aa11.54□□□□□ -0.56
PNKP-223ENST00000629179 COQ2Q96H96 371 aa11.54□□□□□ -0.56
PNKP-223ENST00000629179 OR5M11Q96RB7 305 aa11.54□□□□□ -0.56
PNKP-223ENST00000629179 ZNF184Q99676 751 aaPredicted RBP11.54□□□□□ -0.56
PNKP-223ENST00000629179 SSX3Q99909 188 aa11.54□□□□□ -0.56
PNKP-223ENST00000629179 METTL9Q9H1A3 318 aa11.54□□□□□ -0.56
PNKP-223ENST00000629179 MEGF9Q9H1U4 602 aa11.54□□□□□ -0.56
PNKP-223ENST00000629179 WNK1Q9H4A3 2382 aa11.54□□□□□ -0.56
PNKP-223ENST00000629179 BTBD17A6NE02 478 aa11.53□□□□□ -0.56
PNKP-223ENST00000629179 H3BUX3 64 aa11.53□□□□□ -0.56
PNKP-223ENST00000629179 HSPB6O14558 160 aa11.53□□□□□ -0.56
PNKP-223ENST00000629179 PIN1P1O15428 100 aa11.53□□□□□ -0.56
PNKP-223ENST00000629179 NDUFA7O95182 113 aa11.53□□□□□ -0.56
PNKP-223ENST00000629179 ARG1P05089 322 aa11.53□□□□□ -0.56
PNKP-223ENST00000629179 CD1AP06126 327 aa11.53□□□□□ -0.56
PNKP-223ENST00000629179 ATXN7L3Q14CW9 347 aaPredicted RBP11.53□□□□□ -0.56
PNKP-223ENST00000629179 KRBOX4Q5JUW0 171 aa11.53□□□□□ -0.56
PNKP-223ENST00000629179 IZUMO2Q6UXV1 221 aa11.53□□□□□ -0.56
PNKP-223ENST00000629179 DYNAPQ8N1N2 210 aa11.53□□□□□ -0.56
PNKP-223ENST00000629179 Q8NFD4 153 aa11.53□□□□□ -0.56
PNKP-223ENST00000629179 DERL3Q96Q80 235 aa11.53□□□□□ -0.56
PNKP-223ENST00000629179 MND1Q9BWT6 205 aa11.53□□□□□ -0.56
PNKP-223ENST00000629179 CDCA4Q9BXL8 241 aa11.53□□□□□ -0.56
PNKP-223ENST00000629179 ANKRD60Q9BZ19 345 aa11.53□□□□□ -0.56
PNKP-223ENST00000629179 VCX3BQ9H321 246 aa11.53□□□□□ -0.56
PNKP-223ENST00000629179 ZNF581Q9P0T4 197 aa11.53□□□□□ -0.56
PNKP-223ENST00000629179 CKLFQ9UBR5 152 aa11.53□□□□□ -0.56
PNKP-223ENST00000629179 VPREB3Q9UKI3 123 aa11.53□□□□□ -0.56
PNKP-223ENST00000629179 LSM2Q9Y333 95 aaKnown RBP11.53□□□□□ -0.56
PNKP-223ENST00000629179 UBE2J1Q9Y385 318 aaPredicted RBP11.53□□□□□ -0.56
PNKP-223ENST00000629179 MMP24Q9Y5R2 645 aa11.53□□□□□ -0.56
PNKP-223ENST00000629179 SESN1Q9Y6P5 492 aa11.53□□□□□ -0.56
PNKP-223ENST00000629179 TRGV10A0A0A0MS01 117 aa11.52□□□□□ -0.57
PNKP-223ENST00000629179 TRAV24A0A0B4J272 114 aa11.52□□□□□ -0.57
PNKP-223ENST00000629179 ODAMA1E959 279 aa11.52□□□□□ -0.57
PNKP-223ENST00000629179 FUOMA2VDF0 154 aa11.52□□□□□ -0.57
PNKP-223ENST00000629179 FAM90A8PA6NJQ4 464 aa11.52□□□□□ -0.57
PNKP-223ENST00000629179 POM121CA8CG34 1229 aa11.52□□□□□ -0.57
PNKP-223ENST00000629179 ODF3BA8MYP8 253 aa11.52□□□□□ -0.57
PNKP-223ENST00000629179 MAS1P04201 325 aa11.52□□□□□ -0.57
PNKP-223ENST00000629179 CSN2P05814 226 aa11.52□□□□□ -0.57
PNKP-223ENST00000629179 FSTP19883 344 aa11.52□□□□□ -0.57
PNKP-223ENST00000629179 SERPINA2P20848 420 aa11.52□□□□□ -0.57
PNKP-223ENST00000629179 RPL15P61313 204 aaKnown RBP11.52□□□□□ -0.57
PNKP-223ENST00000629179 SLC35A2P78381 396 aa11.52□□□□□ -0.57
PNKP-223ENST00000629179 BDH1Q02338 343 aa11.52□□□□□ -0.57
PNKP-223ENST00000629179 DYNC1I2Q13409 638 aaKnown RBP11.52□□□□□ -0.57
PNKP-223ENST00000629179 IL13RA2Q14627 380 aa11.52□□□□□ -0.57
PNKP-223ENST00000629179 INSL4Q14641 139 aa11.52□□□□□ -0.57
PNKP-223ENST00000629179 IRF3Q14653 427 aa11.52□□□□□ -0.57
PNKP-223ENST00000629179 LY6EQ16553 131 aa11.52□□□□□ -0.57
PNKP-223ENST00000629179 PAN3Q58A45 887 aaKnown RBP11.52□□□□□ -0.57
PNKP-223ENST00000629179 LDLRAD2Q5SZI1 272 aa11.52□□□□□ -0.57
PNKP-223ENST00000629179 PRAMEF5Q5TYX0 476 aa11.52□□□□□ -0.57
PNKP-223ENST00000629179 BAIAP2L2Q6UXY1 529 aa11.52□□□□□ -0.57
PNKP-223ENST00000629179 GDPGP1Q6ZNW5 385 aa11.52□□□□□ -0.57
PNKP-223ENST00000629179 OR11H6Q8NGC7 330 aa11.52□□□□□ -0.57
PNKP-223ENST00000629179 OR4F5Q8NH21 305 aa11.52□□□□□ -0.57
PNKP-223ENST00000629179 OR5R1Q8NH85 324 aa11.52□□□□□ -0.57
PNKP-223ENST00000629179 CORO2AQ92828 525 aa11.52□□□□□ -0.57
PNKP-223ENST00000629179 S100A13Q99584 98 aa11.52□□□□□ -0.57
PNKP-223ENST00000629179 PPIL3Q9H2H8 161 aaKnown RBP11.52□□□□□ -0.57
PNKP-223ENST00000629179 BEX1Q9HBH7 125 aa11.52□□□□□ -0.57
PNKP-223ENST00000629179 IL36GQ9NZH8 169 aa11.52□□□□□ -0.57
PNKP-223ENST00000629179 FOXJ3Q9UPW0 622 aa11.52□□□□□ -0.57
PNKP-223ENST00000629179 TPRKBQ9Y3C4 175 aa11.52□□□□□ -0.57
PNKP-223ENST00000629179 A0A1W2PP11 408 aa11.51□□□□□ -0.57
PNKP-223ENST00000629179 CLPXO76031 633 aa11.51□□□□□ -0.57
PNKP-223ENST00000629179 CSTBP04080 98 aaKnown RBP11.51□□□□□ -0.57
PNKP-223ENST00000629179 GDNFP39905 211 aa11.51□□□□□ -0.57
PNKP-223ENST00000629179 SPHARQ15513 63 aa11.51□□□□□ -0.57
PNKP-223ENST00000629179 MED22Q15528 200 aa11.51□□□□□ -0.57
PNKP-223ENST00000629179 LRRC75BQ2VPJ9 315 aa11.51□□□□□ -0.57
PNKP-223ENST00000629179 PLA1AQ53H76 456 aa11.51□□□□□ -0.57
PNKP-223ENST00000629179 ZNF626Q68DY1 528 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms