RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 KAAG1Q9UBP8 84 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 MAB21L2Q9Y586 359 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 PEX16Q9Y5Y5 336 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 CR1P17927 2039 aa7.09□□□□□ -1.27
SGMS1-211ENST00000626236 FLNBO75369 2602 aaKnown RBP7.08□□□□□ -1.28
SGMS1-211ENST00000626236 PRRC2AP48634 2157 aaKnown RBP7.08□□□□□ -1.28
SGMS1-211ENST00000626236 A0A075B6Q4 140 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 TRAV24A0A0B4J272 114 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 TMEM82A0PJX8 343 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 FAM25AB3EWG3 89 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 FAM25CB3EWG5 89 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 FAM25GB3EWG6 89 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 F5H0A9 414 aaPredicted RBP7.08□□□□□ -1.28
SGMS1-211ENST00000626236 DVL1O14640 695 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 SOCS1O15524 211 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 PSPNO60542 156 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 PDCD6O75340 191 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 ZNF737O75373 536 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 TK1P04183 234 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 EIF4EP06730 217 aaKnown RBP7.08□□□□□ -1.28
SGMS1-211ENST00000626236 HEXAP06865 529 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 WNT2P09544 360 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 NDUFB7P17568 137 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 FUT3P21217 361 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 LMO1P25800 156 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 BLVRBP30043 206 aaPredicted RBP7.08□□□□□ -1.28
SGMS1-211ENST00000626236 SEC61A1P61619 476 aaKnown RBP7.08□□□□□ -1.28
SGMS1-211ENST00000626236 LMO4P61968 165 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 ATXN7L3Q14CW9 347 aaPredicted RBP7.08□□□□□ -1.28
SGMS1-211ENST00000626236 GRK1Q15835 563 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 MOGAT2Q3SYC2 334 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 PAN3Q58A45 887 aaKnown RBP7.08□□□□□ -1.28
SGMS1-211ENST00000626236 LRRC10Q5BKY1 277 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 SIGIRRQ6IA17 410 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 RAB12Q6IQ22 244 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 C17orf107Q6ZR85 190 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 RTN4RL2Q86UN3 420 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 LAX1Q8IWV1 398 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 CMTM4Q8IZR5 234 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 FGFRL1Q8N441 504 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 BPIFB2Q8N4F0 458 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 FAM89BQ8N5H3 189 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 DTX3Q8N9I9 347 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 SUMF2Q8NBJ7 301 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 MAPK1IP1LQ8NDC0 245 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 OR4S1Q8NGB4 309 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 OR10R2Q8NGX6 335 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 NEK7Q8TDX7 302 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 PHF21AQ96BD5 680 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 RAB39BQ96DA2 213 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 NEDD4LQ96PU5 975 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 DPCDQ9BVM2 203 aaPredicted RBP7.08□□□□□ -1.28
SGMS1-211ENST00000626236 REG4Q9BYZ8 158 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 NXF2Q9GZY0 626 aaKnown RBP7.08□□□□□ -1.28
SGMS1-211ENST00000626236 PPA2Q9H2U2 334 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 IFT22Q9H7X7 185 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 SEBOXQ9HB31 216 aaPredicted RBP7.08□□□□□ -1.28
SGMS1-211ENST00000626236 SPACA1Q9HBV2 294 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 ING3Q9NXR8 418 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 SLC25A10Q9UBX3 287 aaPredicted RBP7.08□□□□□ -1.28
SGMS1-211ENST00000626236 CLN8Q9UBY8 286 aa7.08□□□□□ -1.28
SGMS1-211ENST00000626236 A0A096LNT2 108 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 UBE2QL1A1L167 161 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 CYSRT1A8MQ03 144 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 FOXI3A8MTJ6 420 aaPredicted RBP7.07□□□□□ -1.28
SGMS1-211ENST00000626236 FAM157AC9JC47 383 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 MCRIP1C9JLW8 97 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 H3BUI4 141 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 K7N7A8 449 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 CTDSP2O14595 271 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 PHF1O43189 567 aaPredicted RBP7.07□□□□□ -1.28
SGMS1-211ENST00000626236 FCN3O75636 299 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 APOA1P02647 267 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 ELK1P19419 428 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 CDK2P24941 298 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 CHATP28329 748 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 OR3A1P47881 315 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 NPY4RP50391 375 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 GNB2P62879 340 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 LOXL1Q08397 574 aaPredicted RBP7.07□□□□□ -1.28
SGMS1-211ENST00000626236 RBM39Q14498 530 aaKnown RBP7.07□□□□□ -1.28
SGMS1-211ENST00000626236 EDDM3AQ14507 147 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 ESCO2Q56NI9 601 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 PLAC9Q5JTB6 97 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 ZNF841Q6ZN19 808 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 Q6ZTK2 550 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 GDPD3Q7L5L3 318 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 C6orf201Q7Z4U5 140 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 IZUMO1Q8IYV9 350 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 OR8H2Q8N162 312 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 PPP1R35Q8TAP8 253 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 RAB40AQ8WXH6 277 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 H1FXQ92522 213 aaKnown RBP7.07□□□□□ -1.28
SGMS1-211ENST00000626236 DYRK2Q92630 601 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 RAB3CQ96E17 227 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 S100A16Q96FQ6 103 aaKnown RBP7.07□□□□□ -1.28
SGMS1-211ENST00000626236 ARHGAP5-AS1Q96IT6 56 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 CYYR1Q96J86 154 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 SNX22Q96L94 193 aa7.07□□□□□ -1.28
SGMS1-211ENST00000626236 CMTM3Q96MX0 182 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms