RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 OR11L1Q8NGX0 322 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 OR6N1Q8NGY5 312 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 RNF128Q8TEB7 428 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 GINS4Q9BRT9 223 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 C1QTNF5Q9BXJ0 243 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 TXNIPQ9H3M7 391 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 ZDHHC11Q9H8X9 412 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 ACKR4Q9NPB9 350 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 NECAP2Q9NVZ3 263 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 DHDHQ9UQ10 334 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 RNF115Q9Y4L5 304 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 PKD1L2Q7Z442 2459 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 CACNA1GO43497 2377 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 CNTRLQ7Z7A1 2325 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 NPIPB5A8MRT5 1133 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 A8MVM7 634 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 I3L521 148 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 ETV2O00321 342 aaPredicted RBP10.03□□□□□ -0.8
LINC00538-201ENST00000626109 SLC17A2O00624 439 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 GOSR2O14653 212 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 ZIC3O60481 467 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 MPC2O95563 127 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 NDUFB7P17568 137 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 HLA-GP17693 338 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 APOBEC1P41238 236 aaKnown RBP10.03□□□□□ -0.8
LINC00538-201ENST00000626109 RNPS1Q15287 305 aaKnown RBP10.03□□□□□ -0.8
LINC00538-201ENST00000626109 EFNB3Q15768 340 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 WDR38Q5JTN6 314 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 OR51D1Q8NGF3 324 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 CCDC107Q8WV48 283 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 NPIPB3Q92617 1050 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 FAM3DQ96BQ1 224 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 RBP7Q96R05 134 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 NPAS1Q99742 590 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 DEFB127Q9H1M4 99 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 KIAA1456Q9P272 454 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 KCNG2Q9UJ96 466 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 CFAP47Q6ZTR5 3102 aa10.03□□□□□ -0.8
LINC00538-201ENST00000626109 TRAV18A0A075B6X5 111 aa10.02□□□□□ -0.81
LINC00538-201ENST00000626109 RFPL4AA6NLU0 287 aa10.02□□□□□ -0.81
LINC00538-201ENST00000626109 HMSDA8MTL9 139 aa10.02□□□□□ -0.81
LINC00538-201ENST00000626109 SHISA8B8ZZ34 492 aa10.02□□□□□ -0.81
LINC00538-201ENST00000626109 RFPL4AL1F8VTS6 287 aa10.02□□□□□ -0.81
LINC00538-201ENST00000626109 SLC16A7O60669 478 aa10.02□□□□□ -0.81
LINC00538-201ENST00000626109 GTF2F2P13984 249 aa10.02□□□□□ -0.81
LINC00538-201ENST00000626109 S100PP25815 95 aa10.02□□□□□ -0.81
LINC00538-201ENST00000626109 CALCRP30988 508 aa10.02□□□□□ -0.81
LINC00538-201ENST00000626109 MPPED2Q15777 294 aa10.02□□□□□ -0.81
LINC00538-201ENST00000626109 PUSL1Q8N0Z8 303 aaKnown RBP10.02□□□□□ -0.81
LINC00538-201ENST00000626109 RNF141Q8WVD5 230 aa10.02□□□□□ -0.81
LINC00538-201ENST00000626109 ZNF524Q96C55 264 aa10.02□□□□□ -0.81
LINC00538-201ENST00000626109 ZNF587Q96SQ5 575 aaPredicted RBP10.02□□□□□ -0.81
LINC00538-201ENST00000626109 MAP1LC3CQ9BXW4 147 aa10.02□□□□□ -0.81
LINC00538-201ENST00000626109 GSN-AS1Q9NRJ2 163 aa10.02□□□□□ -0.81
LINC00538-201ENST00000626109 PIPOXQ9P0Z9 390 aa10.02□□□□□ -0.81
LINC00538-201ENST00000626109 ELOA3CA0A087WX78 387 aaPredicted RBP10.01□□□□□ -0.81
LINC00538-201ENST00000626109 TMED7-TICAM2A0A0A6YYA0 188 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 TRGV5A0A0B4J1U4 118 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 A0A1B0GTH9 108 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 OR2M5A3KFT3 312 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 A6NIZ1 184 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 NPIPA5E9PKD4 350 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 M0QZ24 198 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 IGHMP01871 453 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 PMCHP20382 165 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 NPBWR2P48146 333 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 MEOX2P50222 304 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 TAS2R19P59542 299 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 RAP1BP61224 184 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 RAP1AP62834 184 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 ADAM8P78325 824 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 ID3Q02535 119 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 ACKR1Q16570 336 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 ODF4Q2M2E3 257 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 C6orf226Q5I0X4 101 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 DNM1P34Q6PK57 102 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 OR4C16Q8NGL9 310 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 ZNF519Q8TB69 540 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 ATG5Q9H1Y0 275 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 NDRG3Q9UGV2 375 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 NPIPA1Q9UND3 350 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 PRELID3BQ9Y3B1 194 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 TMED7Q9Y3B3 224 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 MMP24Q9Y5R2 645 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 MGAQ8IWI9 3026 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 USP24Q9UPU5 2620 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 LOC400499M0QZD8 3231 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 RPS10-NUDT3A0A1W2PQS6 291 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 MCRIP1C9JLW8 97 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 G3V3Q6 166 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 RP2O75695 350 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 IGHG3P01860 377 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 PTHLHP12272 177 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 ZNF823P16415 610 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 LAP3P28838 519 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 B3GALT5-AS1P59052 145 aa10.01□□□□□ -0.81
LINC00538-201ENST00000626109 SEC61A1P61619 476 aaKnown RBP10.01□□□□□ -0.81
LINC00538-201ENST00000626109 EIF2B1Q14232 305 aaKnown RBP10.01□□□□□ -0.81
LINC00538-201ENST00000626109 PAN3Q58A45 887 aaKnown RBP10.01□□□□□ -0.81
LINC00538-201ENST00000626109 C1orf140Q5VVS0 124 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms