RNA–Protein interactions for RNA: ENST00000625243.1

CHD2-203, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-203ENST00000625243 GCLMP48507 274 aa1.28□□□□□ -2.2
CHD2-203ENST00000625243 KLF3P57682 345 aaPredicted RBP1.28□□□□□ -2.2
CHD2-203ENST00000625243 STX3Q13277 289 aa1.28□□□□□ -2.2
CHD2-203ENST00000625243 TMED1Q13445 227 aa1.28□□□□□ -2.2
CHD2-203ENST00000625243 FAM53BQ14153 422 aa1.28□□□□□ -2.2
CHD2-203ENST00000625243 TRAM1Q15629 374 aa1.28□□□□□ -2.2
CHD2-203ENST00000625243 TNXAQ16473 311 aa1.28□□□□□ -2.2
CHD2-203ENST00000625243 PSG3Q16557 428 aa1.28□□□□□ -2.2
CHD2-203ENST00000625243 CEACAM16Q2WEN9 425 aa1.28□□□□□ -2.2
CHD2-203ENST00000625243 Q499Y3 187 aa1.28□□□□□ -2.2
CHD2-203ENST00000625243 PYDC2Q56P42 97 aa1.28□□□□□ -2.2
CHD2-203ENST00000625243 NXNL2Q5VZ03 156 aa1.28□□□□□ -2.2
CHD2-203ENST00000625243 LAMTOR1Q6IAA8 161 aa1.28□□□□□ -2.2
CHD2-203ENST00000625243 GLYATQ6IB77 296 aa1.28□□□□□ -2.2
CHD2-203ENST00000625243 CLEC18BQ6UXF7 455 aa1.28□□□□□ -2.2
CHD2-203ENST00000625243 BRD3OSQ6XYD6 125 aa1.28□□□□□ -2.2
CHD2-203ENST00000625243 TMPPEQ6ZT21 453 aa1.28□□□□□ -2.2
CHD2-203ENST00000625243 TMEM144Q7Z5S9 345 aa1.28□□□□□ -2.2
CHD2-203ENST00000625243 PRNTQ86SH4 94 aa1.28□□□□□ -2.2
CHD2-203ENST00000625243 GALNT10Q86SR1 603 aa1.28□□□□□ -2.2
CHD2-203ENST00000625243 MRPL52Q86TS9 123 aaKnown RBP1.28□□□□□ -2.2
CHD2-203ENST00000625243 LRP11Q86VZ4 500 aa1.28□□□□□ -2.2
CHD2-203ENST00000625243 C10orf107Q8IVU9 208 aa1.28□□□□□ -2.2
CHD2-203ENST00000625243 ZNF738Q8NE65 137 aa1.28□□□□□ -2.2
CHD2-203ENST00000625243 PYURFQ96I23 114 aa1.28□□□□□ -2.2
CHD2-203ENST00000625243 DSN1Q9H410 356 aa1.28□□□□□ -2.2
CHD2-203ENST00000625243 AGPAT3Q9NRZ7 376 aa1.28□□□□□ -2.2
CHD2-203ENST00000625243 ZNF492Q9P255 531 aa1.28□□□□□ -2.2
CHD2-203ENST00000625243 CLEC2DQ9UHP7 191 aa1.28□□□□□ -2.2
CHD2-203ENST00000625243 RBMX2Q9Y388 322 aaKnown RBP1.28□□□□□ -2.2
CHD2-203ENST00000625243 ZNF706Q9Y5V0 76 aaPredicted RBP1.28□□□□□ -2.2
CHD2-203ENST00000625243 USP42Q9H9J4 1324 aaKnown RBP1.28□□□□□ -2.2
CHD2-203ENST00000625243 MADDQ8WXG6 1647 aa1.28□□□□□ -2.2
CHD2-203ENST00000625243 PPRC1Q5VV67 1664 aaKnown RBP1.28□□□□□ -2.2
CHD2-203ENST00000625243 PDE4DIPQ5VU43 2346 aa1.28□□□□□ -2.2
CHD2-203ENST00000625243 CACNA1GO43497 2377 aa1.28□□□□□ -2.2
CHD2-203ENST00000625243 CEP350Q5VT06 3117 aa1.28□□□□□ -2.2
CHD2-203ENST00000625243 FCGBPQ9Y6R7 5405 aaPredicted RBP1.27□□□□□ -2.21
CHD2-203ENST00000625243 TET2Q6N021 2002 aaPredicted RBP1.27□□□□□ -2.21
CHD2-203ENST00000625243 COL27A1Q8IZC6 1860 aaPredicted RBP1.27□□□□□ -2.21
CHD2-203ENST00000625243 RIMS1Q86UR5 1692 aaKnown RBP1.27□□□□□ -2.21
CHD2-203ENST00000625243 URB2Q14146 1524 aaKnown RBP1.27□□□□□ -2.21
CHD2-203ENST00000625243 IGHV3-21A0A0B4J1V1 117 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 RBFOX3A6NFN3 312 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 ZNF233A6NK53 670 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 FAM183AA6NL82 134 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 VGLL3A8MV65 326 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 FAM25EA8MYX2 175 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 F5H5P2 479 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 F8VP50 259 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 RNASEK-C17orf49H0YIS7 233 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 BOLA2-SMG1P6H3BVE0 249 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 M0QXV9 152 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 PLPP3O14495 311 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 ENTPD6O75354 484 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 SNAP29O95721 258 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 CECR9P0C854 216 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 INAFM2P0DMQ5 153 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 ZNF35P13682 527 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 GTF2F2P13984 249 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 GTF2H1P32780 548 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 UGT2B10P36537 528 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 SPAM1P38567 509 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 KCNJ3P48549 501 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 UBE2KP61086 200 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 HBG1P69891 147 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 HBG2P69892 147 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 FLOT2Q14254 428 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 ANGPT1Q15389 498 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 BSXQ3C1V8 233 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 LGALSLQ3ZCW2 172 aaPredicted RBP1.27□□□□□ -2.21
CHD2-203ENST00000625243 ZNF660Q6AZW8 331 aaPredicted RBP1.27□□□□□ -2.21
CHD2-203ENST00000625243 AMMECR1LQ6DCA0 310 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 FAM183BPQ6ZVS7 135 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 OLIG3Q7RTU3 272 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 ADM2Q7Z4H4 148 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 SPICQ8N5J4 248 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 LINC00337Q8N6G1 96 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 OR4C13Q8NGP0 309 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 OR8S1Q8NH09 359 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 ACTL9Q8TC94 416 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 CACNG8Q8WXS5 425 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 OTUB2Q96DC9 234 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 ZMYND19Q96E35 227 aaPredicted RBP1.27□□□□□ -2.21
CHD2-203ENST00000625243 FMC1Q96HJ9 113 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 CFAP53Q96M91 514 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 ZNF391Q9UJN7 358 aa1.27□□□□□ -2.21
CHD2-203ENST00000625243 NXT1Q9UKK6 140 aaKnown RBP1.27□□□□□ -2.21
CHD2-203ENST00000625243 NHSL1Q5SYE7 1610 aa1.26□□□□□ -2.21
CHD2-203ENST00000625243 FANCD2Q9BXW9 1451 aa1.26□□□□□ -2.21
CHD2-203ENST00000625243 TRAV8-3A0A0A6YYJ7 113 aa1.26□□□□□ -2.21
CHD2-203ENST00000625243 IGHV2-26A0A0B4J1V2 119 aa1.26□□□□□ -2.21
CHD2-203ENST00000625243 TRAV8-2A0A0B4J237 113 aa1.26□□□□□ -2.21
CHD2-203ENST00000625243 MYBPHLA2RUH7 354 aa1.26□□□□□ -2.21
CHD2-203ENST00000625243 SLC31A1O15431 190 aa1.26□□□□□ -2.21
CHD2-203ENST00000625243 FABP7O15540 132 aa1.26□□□□□ -2.21
CHD2-203ENST00000625243 FADS2O95864 444 aaKnown RBP1.26□□□□□ -2.21
CHD2-203ENST00000625243 CA2P00918 260 aa1.26□□□□□ -2.21
CHD2-203ENST00000625243 IGHV3-53P01767 116 aa1.26□□□□□ -2.21
CHD2-203ENST00000625243 IGHMP01871 453 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms